Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt12e09
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    36   0.002
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    36   0.002
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    36   0.002
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    27   0.57 

>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 429 ILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYSG 265
           +LG H +GP  GE+I     A + G   + +      HPT AE      +   SG
Sbjct: 465 VLGLHFLGPAAGEVIQGFAAALKCGLTMQVLRNTVGIHPTVAEEFTRLAITKRSG 519


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 429 ILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYSG 265
           +LG H +GP  GE+I     A + G   + +      HPT AE      +   SG
Sbjct: 441 VLGLHFLGPAAGEVIQGFAAALKCGLTMQVLRNTVGIHPTVAEEFTRLAITKRSG 495


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 429 ILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYSG 265
           +LG H +GP  GE+I     A + G   + +      HPT AE      +   SG
Sbjct: 438 VLGLHFLGPAAGEVIQGFAAALKCGLTMQVLRNTVGIHPTVAEEFTRLAITKRSG 492


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 417 HIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAE 301
           H + PG G  +N A L   + A         H HPT A+
Sbjct: 479 HHVSPGMGSTVNGASLTHSHHAHPHHHHHHHHHHPTAAD 517


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,806
Number of Sequences: 2352
Number of extensions: 13086
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)