Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12e04
(246 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-15|CAD27766.1| 56|Anopheles gambiae putative ribosoma... 110 8e-27
AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase inhi... 26 0.17
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 23 1.2
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 23 1.2
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 23 1.2
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 23 2.1
AY341174-1|AAR13738.1| 280|Anopheles gambiae fibrinogen protein. 22 3.7
AY341173-1|AAR13737.1| 280|Anopheles gambiae fibrinogen protein. 22 3.7
AY341172-1|AAR13736.1| 280|Anopheles gambiae fibrinogen protein. 22 3.7
AY341171-1|AAR13735.1| 280|Anopheles gambiae fibrinogen protein. 22 3.7
AY341170-1|AAR13734.1| 280|Anopheles gambiae fibrinogen protein. 22 3.7
AY341169-1|AAR13733.1| 280|Anopheles gambiae fibrinogen protein. 22 3.7
AY341168-1|AAR13732.1| 280|Anopheles gambiae fibrinogen protein. 22 3.7
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 22 3.7
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 22 3.7
AF457560-1|AAL68790.1| 56|Anopheles gambiae hypothetical prote... 21 4.9
AY994094-1|AAX86007.1| 41|Anopheles gambiae metallothionein 2 ... 21 8.5
AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant r... 21 8.5
>AJ439060-15|CAD27766.1| 56|Anopheles gambiae putative ribosomal
protein protein.
Length = 56
Score = 110 bits (264), Expect = 8e-27
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = -1
Query: 165 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 1
MG AN+WYSHPR+YGQGSR R+CSN HG+IRKYGLNICRQCFREYA DIGF+KL
Sbjct: 1 MGFANLWYSHPRKYGQGSRFWRACSNNHGMIRKYGLNICRQCFREYAKDIGFRKL 55
>AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase
inhibitor protein protein.
Length = 335
Score = 26.2 bits (55), Expect = 0.17
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 60 NRTCGLSHACWSRIGMTEILVRICEGENTK--YLRGPF*EIK 179
N+ C S AC+ + TEI V + E E T+ + GP+ +++
Sbjct: 241 NKDC-CSGACYKSVCSTEIRVGVLESELTRPSVINGPYIQVQ 281
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 23.4 bits (48), Expect = 1.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 133 SQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 38
+++R P+LL +A LNP+ E M ++
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 23.4 bits (48), Expect = 1.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 133 SQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 38
+++R P+LL +A LNP+ E M ++
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 23.4 bits (48), Expect = 1.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 133 SQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 38
+++R P+LL +A LNP+ E M ++
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 22.6 bits (46), Expect = 2.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 133 SQIRTRISVMPILLQQAWLNPQVRFEHMQTVL 38
+++R P+LL +A LNP+ E M ++
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKSNREKMTQIM 124
>AY341174-1|AAR13738.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 239 FVQVRHLEGVSNLLLVSEKQFNFLKWA 159
FV H EG+ EK F + WA
Sbjct: 14 FVMKEHSEGIGQNQAHLEKVFGSMLWA 40
>AY341173-1|AAR13737.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 239 FVQVRHLEGVSNLLLVSEKQFNFLKWA 159
FV H EG+ EK F + WA
Sbjct: 14 FVMKEHSEGIGQNQAHLEKVFGSMLWA 40
>AY341172-1|AAR13736.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 239 FVQVRHLEGVSNLLLVSEKQFNFLKWA 159
FV H EG+ EK F + WA
Sbjct: 14 FVMKEHSEGIGQNQAHLEKVFGSMLWA 40
>AY341171-1|AAR13735.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 239 FVQVRHLEGVSNLLLVSEKQFNFLKWA 159
FV H EG+ EK F + WA
Sbjct: 14 FVMKEHSEGIGQNQAHLEKVFGSMLWA 40
>AY341170-1|AAR13734.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 239 FVQVRHLEGVSNLLLVSEKQFNFLKWA 159
FV H EG+ EK F + WA
Sbjct: 14 FVMKEHSEGIGQNQAHLEKVFGSMLWA 40
>AY341169-1|AAR13733.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 239 FVQVRHLEGVSNLLLVSEKQFNFLKWA 159
FV H EG+ EK F + WA
Sbjct: 14 FVMKEHSEGIGQNQAHLEKVFGSMLWA 40
>AY341168-1|AAR13732.1| 280|Anopheles gambiae fibrinogen protein.
Length = 280
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 239 FVQVRHLEGVSNLLLVSEKQFNFLKWA 159
FV H EG+ EK F + WA
Sbjct: 14 FVMKEHSEGIGQNQAHLEKVFGSMLWA 40
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 21.8 bits (44), Expect = 3.7
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLLESYVMSILSEALSAYVQTV--LAD*AMPVGAGSA*PRSLSVSARVRIPNIC 156
+LL S V S+ + + + T L + + P G G+ R S V +PN C
Sbjct: 1345 RLLSSNVRSLGNSPVHSGRSTPRELLESSQPAGGGTPRGRHSWASNSVEVPNTC 1398
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 21.8 bits (44), Expect = 3.7
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 160 AHFKKLNCFSLTSNKL 207
+H+K++ C+SL L
Sbjct: 174 SHYKRIQCYSLKQRSL 189
>AF457560-1|AAL68790.1| 56|Anopheles gambiae hypothetical protein
13 protein.
Length = 56
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = -3
Query: 229 FAILKVYLICC--SLARNNLI 173
FA+L V L+CC S+ N +I
Sbjct: 6 FALLLVVLVCCLVSVQGNEII 26
>AY994094-1|AAX86007.1| 41|Anopheles gambiae metallothionein 2
protein.
Length = 41
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 48 CICSNRTCGLSHACWSR 98
C C++ CG C SR
Sbjct: 10 CKCTSPNCGAGCGCESR 26
>AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant
receptor Or4 protein.
Length = 397
Score = 20.6 bits (41), Expect = 8.5
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -1
Query: 159 HANIWYSHPRRYGQGSRSCRSCSNRHGLI 73
+A WY++P + R S RH I
Sbjct: 333 YATRWYNYPIAFRSSIRMMLRQSQRHAHI 361
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 274,007
Number of Sequences: 2352
Number of extensions: 6106
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12301044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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