Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12e02
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF560717-1|ABQ59027.1| 983|Homo sapiens PHC3 protein protein. 32 2.2
BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein. 32 2.2
AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic... 32 2.2
AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein ... 32 2.2
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 31 3.8
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 3.8
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 3.8
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 3.8
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 3.8
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 3.8
BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated prot... 28 4.3
BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated prot... 28 4.3
BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated prot... 28 4.3
BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated prot... 28 4.3
AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated prot... 28 4.3
AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated prot... 28 4.3
BC121094-1|AAI21095.1| 154|Homo sapiens keratin associated prot... 28 4.3
AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated prot... 28 4.3
AJ406948-1|CAC27587.1| 154|Homo sapiens keratin associated prot... 28 4.3
AK127139-1|BAC86847.1| 131|Homo sapiens protein ( Homo sapiens ... 31 5.0
AJ566387-1|CAD97467.1| 251|Homo sapiens keratin associated prot... 31 5.0
AF326592-1|AAL37371.1| 1171|Homo sapiens homeodomain interacting... 31 5.0
AF208291-1|AAG41236.1| 1198|Homo sapiens protein kinase HIPK2 pr... 31 5.0
AF207702-1|AAG35710.1| 911|Homo sapiens homeodomain-interacting... 31 5.0
AC005531-1|AAS00368.1| 292|Homo sapiens unknown protein. 31 5.0
AB076358-1|BAD01545.1| 251|Homo sapiens keratin associated prot... 31 5.0
BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated prot... 30 6.6
BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated prot... 30 6.6
DQ884944-1|ABI78991.1| 245|Homo sapiens basonuclin 2 protein. 30 8.8
DQ884941-1|ABI78989.1| 401|Homo sapiens basonuclin 2 protein. 30 8.8
DQ884940-1|ABI78988.1| 295|Homo sapiens basonuclin 2 protein. 30 8.8
DQ884939-1|ABI78987.1| 387|Homo sapiens basonuclin 2 protein. 30 8.8
DQ884938-1|ABI78986.1| 410|Homo sapiens basonuclin 2 protein. 30 8.8
AY438376-1|AAR99389.1| 1021|Homo sapiens basonuclin2 protein. 30 8.8
AL450105-2|CAM21221.1| 1099|Homo sapiens basonuclin 2 protein. 30 8.8
AL450105-1|CAM21222.1| 1032|Homo sapiens basonuclin 2 protein. 30 8.8
AK131398-1|BAD18545.1| 1099|Homo sapiens protein ( Homo sapiens ... 30 8.8
BC117287-1|AAI17288.1| 174|Homo sapiens keratin associated prot... 27 9.3
BC069560-1|AAH69560.1| 173|Homo sapiens KRTAP9-2 protein protein. 27 9.3
>EF560717-1|ABQ59027.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 31.9 bits (69), Expect = 2.2
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 52 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 231
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 232 PPYTTRSRALQLQVDVLIF 288
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 31.9 bits (69), Expect = 2.2
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 52 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 231
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 232 PPYTTRSRALQLQVDVLIF 288
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic 3
protein.
Length = 983
Score = 31.9 bits (69), Expect = 2.2
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 52 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 231
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 232 PPYTTRSRALQLQVDVLIF 288
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein
protein.
Length = 983
Score = 31.9 bits (69), Expect = 2.2
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 52 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 231
SGRP TSP+ +S + T ++ S + ++L +++ S S +G +++L +
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163
Query: 232 PPYTTRSRALQLQVDVLIF 288
P T + L+ +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 464 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 285
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 284 MSTSTCNCNARDRVVYGGNSADSTREQW 201
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 464 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 285
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 284 MSTSTCNCNARDRVVYGGNSADSTREQW 201
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 464 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 285
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 284 MSTSTCNCNARDRVVYGGNSADSTREQW 201
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 464 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 285
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 284 MSTSTCNCNARDRVVYGGNSADSTREQW 201
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 464 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 285
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 284 MSTSTCNCNARDRVVYGGNSADSTREQW 201
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -1
Query: 464 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKAHNTKYNQYLK 285
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 284 MSTSTCNCNARDRVVYGGNSADSTREQW 201
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C SC S C + CC
Sbjct: 25 TTCSSTPCCQPSCCVSSC---CQPCC 47
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 545 CRPTACSSTPW 577
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C SC S C + CC
Sbjct: 25 TTCSSTPCCQPSCCVSSC---CQPCC 47
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 545 CRPTACSSTPW 577
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C SC S C + CC
Sbjct: 25 TTCSSTPCCQPSCCVSSC---CQPCC 47
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 545 CRPTACSSTPW 577
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C SC S C + CC
Sbjct: 25 TTCSSTPCCQPSCCVSSC---CQPCC 47
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 545 CRPTACSSTPW 577
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated protein
9.8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C SC S C + CC
Sbjct: 25 TTCSSTPCCQPSCCVSSC---CQPCC 47
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 545 CRPTACSSTPW 577
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated protein
9.3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C SC S C + CC
Sbjct: 25 TTCSSTPCCQPSCCVSSC---CQPCC 47
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 545 CRPTACSSTPW 577
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC121094-1|AAI21095.1| 154|Homo sapiens keratin associated protein
9-4 protein.
Length = 154
Score = 27.9 bits (59), Expect(2) = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C SC S C + CC
Sbjct: 30 TTCSSTPCCQPSCCVSSC---CQPCC 52
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 536 PVRCRPTACSSTPW 577
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated protein
9.9 protein.
Length = 154
Score = 27.9 bits (59), Expect(2) = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C SC S C + CC
Sbjct: 30 TTCSSTPCCQPSCCVSSC---CQPCC 52
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 536 PVRCRPTACSSTPW 577
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>AJ406948-1|CAC27587.1| 154|Homo sapiens keratin associated protein
9.4 protein.
Length = 154
Score = 27.9 bits (59), Expect(2) = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C SC S C + CC
Sbjct: 30 TTCSSTPCCQPSCCVSSC---CQPCC 52
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 536 PVRCRPTACSSTPW 577
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>AK127139-1|BAC86847.1| 131|Homo sapiens protein ( Homo sapiens
cDNA FLJ45196 fis, clone BRCAN2002662. ).
Length = 131
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = -1
Query: 608 NNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYV-----KLIYRNYNLAL 444
N+ I D N ME C+ W G I+ + + LI+ G Y+ L+ R AL
Sbjct: 58 NSGINDPFTNLMEKCFSRWEGLMSSILTSFAVIIGVLILVGYYIVFCAQGLVQRLIETAL 117
Query: 443 KLGSTTNPS 417
S T+PS
Sbjct: 118 TKTSPTSPS 126
>AJ566387-1|CAD97467.1| 251|Homo sapiens keratin associated protein
KAP10.10 protein.
Length = 251
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 545 CRPTACSSTPWCSVSCQ*SDC*LHFERCCPGP 640
C P +C S+P C +C+ S C + C P
Sbjct: 42 CTPVSCVSSPCCQTACEPSACQSGYTSSCTTP 73
>AF326592-1|AAL37371.1| 1171|Homo sapiens homeodomain interacting
protein kinase 2 protein.
Length = 1171
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 76 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 252
SC T SP + + ++S S+ R N +F +NHC+ + ++PP T++
Sbjct: 890 SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 949
Query: 253 RALQLQVDVLI 285
+ ++ D L+
Sbjct: 950 SEVLVECDSLV 960
>AF208291-1|AAG41236.1| 1198|Homo sapiens protein kinase HIPK2
protein.
Length = 1198
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 76 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 252
SC T SP + + ++S S+ R N +F +NHC+ + ++PP T++
Sbjct: 917 SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 976
Query: 253 RALQLQVDVLI 285
+ ++ D L+
Sbjct: 977 SEVLVECDSLV 987
>AF207702-1|AAG35710.1| 911|Homo sapiens homeodomain-interacting
protein kinase 2 protein.
Length = 911
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 76 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 252
SC T SP + + ++S S+ R N +F +NHC+ + ++PP T++
Sbjct: 810 SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 869
Query: 253 RALQLQVDVLI 285
+ ++ D L+
Sbjct: 870 SEVLVECDSLV 880
>AC005531-1|AAS00368.1| 292|Homo sapiens unknown protein.
Length = 292
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 76 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 252
SC T SP + + ++S S+ R N +F +NHC+ + ++PP T++
Sbjct: 11 SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 70
Query: 253 RALQLQVDVLI 285
+ ++ D L+
Sbjct: 71 SEVLVECDSLV 81
>AB076358-1|BAD01545.1| 251|Homo sapiens keratin associated protein
protein.
Length = 251
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 545 CRPTACSSTPWCSVSCQ*SDC*LHFERCCPGP 640
C P +C S+P C +C+ S C + C P
Sbjct: 42 CTPVSCVSSPCCQTACEPSACQSGYTSSCTTP 73
>BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 30.3 bits (65), Expect = 6.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 545 CRPTACSSTPWCSVSCQ*SDC 607
C P +C S+P C V+C+ S C
Sbjct: 57 CTPVSCVSSPCCPVTCEPSPC 77
>BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 30.3 bits (65), Expect = 6.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 545 CRPTACSSTPWCSVSCQ*SDC 607
C P +C S+P C V+C+ S C
Sbjct: 57 CTPVSCVSSPCCPVTCEPSPC 77
>DQ884944-1|ABI78991.1| 245|Homo sapiens basonuclin 2 protein.
Length = 245
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 516 EVLFDNILSVA-DPQLVAVLHGVPSLVNDQIVNYILNDAA 632
++L D + SV +++ +LHG+ + D + YIL DAA
Sbjct: 109 KILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAA 148
>DQ884941-1|ABI78989.1| 401|Homo sapiens basonuclin 2 protein.
Length = 401
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 516 EVLFDNILSVA-DPQLVAVLHGVPSLVNDQIVNYILNDAA 632
++L D + SV +++ +LHG+ + D + YIL DAA
Sbjct: 215 KILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAA 254
>DQ884940-1|ABI78988.1| 295|Homo sapiens basonuclin 2 protein.
Length = 295
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 516 EVLFDNILSVA-DPQLVAVLHGVPSLVNDQIVNYILNDAA 632
++L D + SV +++ +LHG+ + D + YIL DAA
Sbjct: 109 KILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAA 148
>DQ884939-1|ABI78987.1| 387|Homo sapiens basonuclin 2 protein.
Length = 387
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 516 EVLFDNILSVA-DPQLVAVLHGVPSLVNDQIVNYILNDAA 632
++L D + SV +++ +LHG+ + D + YIL DAA
Sbjct: 201 KILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAA 240
>DQ884938-1|ABI78986.1| 410|Homo sapiens basonuclin 2 protein.
Length = 410
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 516 EVLFDNILSVA-DPQLVAVLHGVPSLVNDQIVNYILNDAA 632
++L D + SV +++ +LHG+ + D + YIL DAA
Sbjct: 224 KILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAA 263
>AY438376-1|AAR99389.1| 1021|Homo sapiens basonuclin2 protein.
Length = 1021
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 516 EVLFDNILSVA-DPQLVAVLHGVPSLVNDQIVNYILNDAA 632
++L D + SV +++ +LHG+ + D + YIL DAA
Sbjct: 109 KILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAA 148
>AL450105-2|CAM21221.1| 1099|Homo sapiens basonuclin 2 protein.
Length = 1099
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 516 EVLFDNILSVA-DPQLVAVLHGVPSLVNDQIVNYILNDAA 632
++L D + SV +++ +LHG+ + D + YIL DAA
Sbjct: 187 KILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAA 226
>AL450105-1|CAM21222.1| 1032|Homo sapiens basonuclin 2 protein.
Length = 1032
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 516 EVLFDNILSVA-DPQLVAVLHGVPSLVNDQIVNYILNDAA 632
++L D + SV +++ +LHG+ + D + YIL DAA
Sbjct: 120 KILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAA 159
>AK131398-1|BAD18545.1| 1099|Homo sapiens protein ( Homo sapiens
cDNA FLJ16490 fis, clone CTONG2020411, weakly similar
to BASONUCLIN. ).
Length = 1099
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 516 EVLFDNILSVA-DPQLVAVLHGVPSLVNDQIVNYILNDAA 632
++L D + SV +++ +LHG+ + D + YIL DAA
Sbjct: 187 KILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAA 226
>BC117287-1|AAI17288.1| 174|Homo sapiens keratin associated protein
9-2 protein.
Length = 174
Score = 26.6 bits (56), Expect(2) = 9.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C +C S C + CC
Sbjct: 30 TTCSSTPCCQPACCVSSC---CQPCC 52
Score = 21.8 bits (44), Expect(2) = 9.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 536 PVRCRPTACSSTPW 577
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>BC069560-1|AAH69560.1| 173|Homo sapiens KRTAP9-2 protein protein.
Length = 173
Score = 26.6 bits (56), Expect(2) = 9.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 554 TACSSTPWCSVSCQ*SDC*LHFERCC 631
T CSSTP C +C S C + CC
Sbjct: 29 TTCSSTPCCQPACCVSSC---CQPCC 51
Score = 21.8 bits (44), Expect(2) = 9.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 536 PVRCRPTACSSTPW 577
P CR T C +T W
Sbjct: 10 PTCCRTTCCRTTCW 23
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,640,007
Number of Sequences: 237096
Number of extensions: 1838432
Number of successful extensions: 3916
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3916
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -