Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt12d23
         (666 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82206-3|CAI42713.1|  330|Homo sapiens GRB2-related adaptor prot...    30   6.5  
Y18051-1|CAA77021.1|  330|Homo sapiens GADS protein protein.           30   6.5  
CR541849-1|CAG46647.1|  330|Homo sapiens GRAP2 protein.                30   6.5  
CR536524-1|CAG38761.1|  330|Homo sapiens GRAP2 protein.                30   6.5  
CR456498-1|CAG30384.1|  330|Homo sapiens GRAP2 protein.                30   6.5  
BC026002-1|AAH26002.1|  330|Homo sapiens GRAP2 protein protein.        30   6.5  
BC025692-1|AAH25692.1|  330|Homo sapiens GRB2-related adaptor pr...    30   6.5  
AY069959-1|AAL58573.1|  330|Homo sapiens Mona protein.                 30   6.5  
AJ011736-1|CAA09757.1|  330|Homo sapiens growth factor receptor ...    30   6.5  
AF245505-1|AAF86402.1| 2828|Homo sapiens adlican protein.              30   6.5  
AF236120-1|AAF60320.1|  330|Homo sapiens adapter protein GRID pr...    30   6.5  
AF236119-1|AAF60319.1|  330|Homo sapiens adapter protein GRID pr...    30   6.5  
AF129476-1|AAD41782.1|  330|Homo sapiens hematopoietic cell-asso...    30   6.5  
AF121002-1|AAF31758.1|  330|Homo sapiens SH3-SH2-SH3 adaptor pro...    30   6.5  
AF102694-1|AAD04926.1|  330|Homo sapiens Grb2-related adaptor pr...    30   6.5  
AF090456-1|AAD13027.1|  330|Homo sapiens Grb-2-like protein prot...    30   6.5  
AF042380-1|AAC69273.1|  330|Homo sapiens Grf40 adaptor protein p...    30   6.5  
AY834277-1|AAV97885.1|  202|Homo sapiens B7 isoform protein.           30   8.5  

>Z82206-3|CAI42713.1|  330|Homo sapiens GRB2-related adaptor protein
           2 protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>Y18051-1|CAA77021.1|  330|Homo sapiens GADS protein protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>CR541849-1|CAG46647.1|  330|Homo sapiens GRAP2 protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>CR536524-1|CAG38761.1|  330|Homo sapiens GRAP2 protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>CR456498-1|CAG30384.1|  330|Homo sapiens GRAP2 protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>BC026002-1|AAH26002.1|  330|Homo sapiens GRAP2 protein protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>BC025692-1|AAH25692.1|  330|Homo sapiens GRB2-related adaptor
           protein 2 protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>AY069959-1|AAL58573.1|  330|Homo sapiens Mona protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>AJ011736-1|CAA09757.1|  330|Homo sapiens growth factor receptor
           binding protein (GRBLG) protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>AF245505-1|AAF86402.1| 2828|Homo sapiens adlican protein.
          Length = 2828

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = +1

Query: 25  SYKYPSLYARWGRKVLEWRPRMGTRNVGRPPTRWTDDLVRTAGSRWMRKAE 177
           S K P      GR+V E R R+   N    P RW D L +  G    +  E
Sbjct: 750 SEKEPETNVAEGRRVFESRRRINMANKQINPERWADILAKVRGKNLPKGTE 800


>AF236120-1|AAF60320.1|  330|Homo sapiens adapter protein GRID
           protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>AF236119-1|AAF60319.1|  330|Homo sapiens adapter protein GRID
           protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>AF129476-1|AAD41782.1|  330|Homo sapiens hematopoietic
           cell-associated adaptor protein GrpL protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>AF121002-1|AAF31758.1|  330|Homo sapiens SH3-SH2-SH3 adaptor
           protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>AF102694-1|AAD04926.1|  330|Homo sapiens Grb2-related adaptor
           protein 2 protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>AF090456-1|AAD13027.1|  330|Homo sapiens Grb-2-like protein
           protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>AF042380-1|AAC69273.1|  330|Homo sapiens Grf40 adaptor protein
           protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 144 HGGKSLDAEG-GGPHYVEAIGEGLCPAVGR 230
           H G SLD    GGPH   A+GE + P++ R
Sbjct: 155 HRGNSLDRRSQGGPHLSGAVGEEIRPSMNR 184


>AY834277-1|AAV97885.1|  202|Homo sapiens B7 isoform protein.
          Length = 202

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 82  PRMGTRNVGRPPTRWTDDLVRTAGSRWMRKAEDR 183
           PR+ T N+     RW  DL+R  G+   R  E+R
Sbjct: 155 PRLETLNLKGDQRRWPSDLIRLPGAATTRMTENR 188


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,354,238
Number of Sequences: 237096
Number of extensions: 1997860
Number of successful extensions: 4788
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4787
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)