Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12d20
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated prot... 28 1.0
BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated prot... 28 1.0
BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated prot... 28 1.0
BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated prot... 28 1.0
AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated prot... 28 1.0
AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated prot... 28 1.0
BC030702-1|AAH30702.2| 610|Homo sapiens MCPH1 protein protein. 31 2.5
AY505992-1|AAS87829.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY505990-1|AAS87827.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY505987-1|AAS87824.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY505986-1|AAS87823.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY505984-1|AAS87821.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY505983-1|AAS87820.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY505982-1|AAS87819.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY505981-1|AAS87818.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY505980-1|AAS87817.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY505977-1|AAS87814.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307836-1|AAQ92732.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307834-1|AAQ92730.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307833-1|AAQ92729.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307832-1|AAQ92728.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307830-1|AAQ92726.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307829-1|AAQ92725.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307827-1|AAQ92723.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307826-1|AAQ92722.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307825-1|AAQ92721.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307823-1|AAQ92719.1| 384|Homo sapiens microcephalin protein. 31 2.5
AY307821-1|AAQ92717.1| 384|Homo sapiens microcephalin protein. 31 2.5
AK022909-1|BAB14304.1| 740|Homo sapiens protein ( Homo sapiens ... 31 2.5
>BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 559 TACSSTPWCSDSCQ*SGC 612
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 538 CAVRCRPTACSSTPW 582
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 559 TACSSTPWCSDSCQ*SGC 612
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 538 CAVRCRPTACSSTPW 582
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 559 TACSSTPWCSDSCQ*SGC 612
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 538 CAVRCRPTACSSTPW 582
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 559 TACSSTPWCSDSCQ*SGC 612
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 538 CAVRCRPTACSSTPW 582
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated protein
9.8 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 559 TACSSTPWCSDSCQ*SGC 612
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 538 CAVRCRPTACSSTPW 582
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated protein
9.3 protein.
Length = 159
Score = 27.9 bits (59), Expect(2) = 1.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 559 TACSSTPWCSDSCQ*SGC 612
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 23.8 bits (49), Expect(2) = 1.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 538 CAVRCRPTACSSTPW 582
C+ C+PT C +T W
Sbjct: 5 CSPCCQPTCCRTTCW 19
>BC030702-1|AAH30702.2| 610|Homo sapiens MCPH1 protein protein.
Length = 610
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 282 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 335
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 336 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 388
>AY505992-1|AAS87829.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505990-1|AAS87827.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505987-1|AAS87824.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505986-1|AAS87823.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505984-1|AAS87821.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505983-1|AAS87820.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505982-1|AAS87819.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505981-1|AAS87818.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505980-1|AAS87817.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY505977-1|AAS87814.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307836-1|AAQ92732.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307834-1|AAQ92730.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307833-1|AAQ92729.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307832-1|AAQ92728.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307830-1|AAQ92726.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307829-1|AAQ92725.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307827-1|AAQ92723.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307826-1|AAQ92722.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307825-1|AAQ92721.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307823-1|AAQ92719.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AY307821-1|AAQ92717.1| 384|Homo sapiens microcephalin protein.
Length = 384
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 58 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 111
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 112 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 164
>AK022909-1|BAB14304.1| 740|Homo sapiens protein ( Homo sapiens
cDNA FLJ12847 fis, clone NT2RP2003347. ).
Length = 740
Score = 31.5 bits (68), Expect = 2.5
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = -2
Query: 476 HLQKLQPRSEARPHS*SRERETCIRRW*GKEQRPHQLEVHYLVGEQQSVLQDPQH*VQPV 297
HL K P+ + S+E R GK PHQ + G Q ++ ++ + P
Sbjct: 187 HLDKSSPQKFLS--NLSKEEINLQRNIAGKVVTPHQKQA---AGMSQETFEE-KYRLSPT 240
Query: 296 LETKFDD*LQHSRPCYIRHQHRRHHQGAVVPPAHEVRKRRPVLH-LQSRVQRC 141
L + L HSRP + +R G+ PP + +++R + R+Q C
Sbjct: 241 LSSTKGHLLIHSRPRSSSVKRKRVSHGSHSPPKEKCKRKRSTRRSIMPRLQLC 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,245,846
Number of Sequences: 237096
Number of extensions: 1863173
Number of successful extensions: 5490
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5455
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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