Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12d05
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D32143-1|BAA06874.1| 206|Homo sapiens biliverdin-IXbeta reducta... 123 5e-28
D26308-1|BAA05370.1| 206|Homo sapiens NADPH-flavin reductase pr... 123 5e-28
BC109371-1|AAI09372.1| 206|Homo sapiens biliverdin reductase B ... 123 5e-28
AY340485-1|AAP88933.1| 206|Homo sapiens biliverdin reductase B ... 123 5e-28
AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein. 33 1.1
AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein. 33 1.1
AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein. 33 1.1
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 32 1.4
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 32 1.4
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 32 1.4
BC130475-1|AAI30476.1| 536|Homo sapiens chromosome 3 open readi... 30 5.8
AK057421-1|BAB71478.1| 536|Homo sapiens protein ( Homo sapiens ... 30 5.8
AB082525-1|BAC02703.1| 1117|Homo sapiens KIAA1994 protein protein. 30 5.8
BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (S... 30 7.7
>D32143-1|BAA06874.1| 206|Homo sapiens biliverdin-IXbeta reductase
I protein.
Length = 206
Score = 123 bits (297), Expect = 5e-28
Identities = 59/134 (44%), Positives = 83/134 (61%)
Frame = -1
Query: 617 VHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEK 438
V + V G DAV++ LGTRNDL+PT+ +SEG +NI+ AM+A V V AC SAFL ++ K
Sbjct: 61 VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK 120
Query: 437 VPPIFVNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCD 258
VPP + +DH RM + L++SGL ++A PPH D P + P R I+K D
Sbjct: 121 VPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHD 180
Query: 257 LGTFLVDALSEPKY 216
LG F++ L+ +Y
Sbjct: 181 LGHFMLRCLTTDEY 194
>D26308-1|BAA05370.1| 206|Homo sapiens NADPH-flavin reductase
protein.
Length = 206
Score = 123 bits (297), Expect = 5e-28
Identities = 59/134 (44%), Positives = 83/134 (61%)
Frame = -1
Query: 617 VHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEK 438
V + V G DAV++ LGTRNDL+PT+ +SEG +NI+ AM+A V V AC SAFL ++ K
Sbjct: 61 VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK 120
Query: 437 VPPIFVNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCD 258
VPP + +DH RM + L++SGL ++A PPH D P + P R I+K D
Sbjct: 121 VPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHD 180
Query: 257 LGTFLVDALSEPKY 216
LG F++ L+ +Y
Sbjct: 181 LGHFMLRCLTTDEY 194
>BC109371-1|AAI09372.1| 206|Homo sapiens biliverdin reductase B
(flavin reductase (NADPH)) protein.
Length = 206
Score = 123 bits (297), Expect = 5e-28
Identities = 59/134 (44%), Positives = 83/134 (61%)
Frame = -1
Query: 617 VHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEK 438
V + V G DAV++ LGTRNDL+PT+ +SEG +NI+ AM+A V V AC SAFL ++ K
Sbjct: 61 VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK 120
Query: 437 VPPIFVNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCD 258
VPP + +DH RM + L++SGL ++A PPH D P + P R I+K D
Sbjct: 121 VPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHD 180
Query: 257 LGTFLVDALSEPKY 216
LG F++ L+ +Y
Sbjct: 181 LGHFMLRCLTTDEY 194
>AY340485-1|AAP88933.1| 206|Homo sapiens biliverdin reductase B
(flavin reductase (NADPH)) protein.
Length = 206
Score = 123 bits (297), Expect = 5e-28
Identities = 59/134 (44%), Positives = 83/134 (61%)
Frame = -1
Query: 617 VHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEK 438
V + V G DAV++ LGTRNDL+PT+ +SEG +NI+ AM+A V V AC SAFL ++ K
Sbjct: 61 VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK 120
Query: 437 VPPIFVNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCD 258
VPP + +DH RM + L++SGL ++A PPH D P + P R I+K D
Sbjct: 121 VPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHD 180
Query: 257 LGTFLVDALSEPKY 216
LG F++ L+ +Y
Sbjct: 181 LGHFMLRCLTTDEY 194
>AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein.
Length = 1283
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 191 CRCQ*LPCSTWVRKARPLGMCRGRTWQWSCP 283
CRC PC+T+V +R G+ W CP
Sbjct: 253 CRCPTCPCATFVEYSRQCAHAGGQPRNWRCP 283
>AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein.
Length = 1594
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 191 CRCQ*LPCSTWVRKARPLGMCRGRTWQWSCP 283
CRC PC+T+V +R G+ W CP
Sbjct: 292 CRCPTCPCATFVEYSRQCAHAGGQPRNWRCP 322
>AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein.
Length = 1321
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 191 CRCQ*LPCSTWVRKARPLGMCRGRTWQWSCP 283
CRC PC+T+V +R G+ W CP
Sbjct: 292 CRCPTCPCATFVEYSRQCAHAGGQPRNWRCP 322
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = -2
Query: 358 SPRFRHTSQTTQAEXXXXX*TLRRHRAGPLPSATSAHS*WTRFPNPSTTRQSLASAMCPK 179
SP HTS + T RR P SA+ TR P+P + RQ S +
Sbjct: 249 SPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRR 308
Query: 178 NEGTYSR 158
+Y R
Sbjct: 309 RSSSYER 315
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = -2
Query: 358 SPRFRHTSQTTQAEXXXXX*TLRRHRAGPLPSATSAHS*WTRFPNPSTTRQSLASAMCPK 179
SP HTS + T RR P SA+ TR P+P + RQ S +
Sbjct: 249 SPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRR 308
Query: 178 NEGTYSR 158
+Y R
Sbjct: 309 RSSSYER 315
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = -2
Query: 358 SPRFRHTSQTTQAEXXXXX*TLRRHRAGPLPSATSAHS*WTRFPNPSTTRQSLASAMCPK 179
SP HTS + T RR P SA+ TR P+P + RQ S +
Sbjct: 303 SPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRR 362
Query: 178 NEGTYSR 158
+Y R
Sbjct: 363 RSSSYER 369
>BC130475-1|AAI30476.1| 536|Homo sapiens chromosome 3 open reading
frame 30 protein.
Length = 536
Score = 30.3 bits (65), Expect = 5.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 396 NVPGSERQRLKLDRRVSATLHRRPKPRNDY 307
+VP +R +++DRR+S + RR + DY
Sbjct: 247 SVPSDQRPSVQIDRRMSGKVRRRSSEKTDY 276
>AK057421-1|BAB71478.1| 536|Homo sapiens protein ( Homo sapiens
cDNA FLJ32859 fis, clone TESTI2003574, weakly similar to
A-KINASE ANCHOR PROTEIN 150. ).
Length = 536
Score = 30.3 bits (65), Expect = 5.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 396 NVPGSERQRLKLDRRVSATLHRRPKPRNDY 307
+VP +R +++DRR+S + RR + DY
Sbjct: 247 SVPSDQRPSVQIDRRMSGKVRRRSSEKTDY 276
>AB082525-1|BAC02703.1| 1117|Homo sapiens KIAA1994 protein protein.
Length = 1117
Score = 30.3 bits (65), Expect = 5.8
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 220 LGSESASTRNVPRSHLAMVLPGVFSGFTSIIISRLGSSVKCGGNAAIQFKP 372
LG+ + ST N+P + V PGV SG I+S +G+ +AA+ P
Sbjct: 377 LGNVNISTSNIPSAAGVSVGPGVTSGVNVNILSGMGNGT-ISSSAAVSSVP 426
>BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 556
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 393 VPGSERQRLKLDRRVSATLHRRPKPRNDY 307
+P R+R+KLDRR A R+P R D+
Sbjct: 1 MPPERRRRMKLDRRTGAKPKRKPGMRPDW 29
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,793,508
Number of Sequences: 237096
Number of extensions: 2105024
Number of successful extensions: 8022
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8018
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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