Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12d01
(559 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39997-1|AAA81096.1| 204|Caenorhabditis elegans Calexcitin prot... 87 1e-17
AY962814-1|AAX81435.1| 189|Caenorhabditis elegans calexcitin 2 ... 86 2e-17
Z36753-1|CAA85340.2| 193|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z36753-2|CAE48510.1| 163|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 40 0.001
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical pr... 34 0.060
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 34 0.060
L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calciu... 34 0.060
AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical ... 34 0.080
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 33 0.14
Z77134-4|CAE17934.1| 148|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 32 0.24
AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical ... 32 0.24
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 31 0.43
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 31 0.43
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 31 0.43
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 31 0.43
AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein phosp... 31 0.56
AF003389-12|AAM22065.1| 572|Caenorhabditis elegans Phosphatase ... 31 0.56
AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase ... 31 0.56
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 30 0.98
Z81522-8|CAB04231.2| 786|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 29 1.7
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 29 1.7
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 29 1.7
U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine rece... 29 2.3
U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine rece... 29 2.3
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 29 2.3
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 29 2.3
U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-lik... 29 3.0
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 28 4.0
L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical pr... 28 4.0
AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical ... 28 4.0
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 28 4.0
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 28 5.2
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 28 5.2
U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calciu... 28 5.2
Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z49130-2|CAA88966.1| 396|Caenorhabditis elegans Hypothetical pr... 27 6.9
AL033536-10|CAN86926.1| 345|Caenorhabditis elegans Hypothetical... 27 6.9
AL033536-9|CAA22140.1| 344|Caenorhabditis elegans Hypothetical ... 27 6.9
AC006695-17|AAF39983.2| 327|Caenorhabditis elegans Hypothetical... 27 6.9
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 27 9.1
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 27 9.1
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 27 9.1
U28991-3|AAK68309.1| 298|Caenorhabditis elegans Hypothetical pr... 27 9.1
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 27 9.1
>U39997-1|AAA81096.1| 204|Caenorhabditis elegans Calexcitin protein
1 protein.
Length = 204
Score = 86.6 bits (205), Expect = 1e-17
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Frame = -2
Query: 552 FTAFFDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSS-ADTDN 376
F+ FFD N S +D DF L ++++ G A Q + +L +W+GL S AD D
Sbjct: 34 FSLFFDRNASHQVDWGDFYLVVKKVRDIYG--AESVQTGFAKKSLAALWEGLCSIADADK 91
Query: 375 DGQVSKEEWISLWEKFSSSPSD-WQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGLDK 199
D +S +EWI L +K + W Y F+F+L D S DG +D E++ +++G D+
Sbjct: 92 DQLISIDEWIGLLKKTDAKTEPKWFKDYQNFMFKLFDVSCDGVMDLAEYTDGMSTYGFDQ 151
Query: 198 AEAASAFQKLSKGKSSVSFAE-----FQELFKEYFASEDVNAPGNFVFGKTSF 55
+E +AF K S K + + F + F S + + GN +FG F
Sbjct: 152 SECDAAFHKFSVDKKGQYVPQMKPETWNTYFHQLFYSTNKSDVGNHLFGIIDF 204
>AY962814-1|AAX81435.1| 189|Caenorhabditis elegans calexcitin 2
protein.
Length = 189
Score = 85.8 bits (203), Expect = 2e-17
Identities = 50/171 (29%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
Frame = -2
Query: 552 FTAFFDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSA-DTDN 376
FT FFD + +G I+ KDF+ IE I + RG + + + L +W ++ A +
Sbjct: 20 FTTFFDLDQNGLIEWKDFKDLIEVIGEVRGRRSDF--FMTARLCLPDIWQKMTEAIGKEE 77
Query: 375 DGQVSKEEWISLWEKFSSSPSD--WQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGLD 202
+ ++ +WI L + S + WQ Y +++F+L D S D +D E+ V FG++
Sbjct: 78 EDIITLSDWIQLCQSSRKSVREPAWQKAYVEYMFKLLDESGDHLVDQAEYVQVLGYFGVN 137
Query: 201 KAEAASAFQKLS---KGK--SSVSFAEFQELFKEYFASEDVNAPGNFVFGK 64
+ +++ F + + +G+ +S+ +F L+K++F SED ++PGN++ GK
Sbjct: 138 RKDSSHCFDQFAFNHQGQLINSIDKKKFHVLWKQFFHSEDPSSPGNWLLGK 188
>Z36753-1|CAA85340.2| 193|Caenorhabditis elegans Hypothetical
protein T09A5.1a protein.
Length = 193
Score = 79.0 bits (186), Expect = 2e-15
Identities = 50/175 (28%), Positives = 94/175 (53%), Gaps = 12/175 (6%)
Frame = -2
Query: 552 FTAFFDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSA-DTDN 376
FT FFD + +G I+ KDF+ IE I + RG + + + L +W ++ A +
Sbjct: 20 FTTFFDLDQNGLIEWKDFKDLIEVIGEVRGRRSDF--FMTARLCLPDIWQKMTEAIGKEE 77
Query: 375 DGQVSKEEWISLWEKFSSSPSD--WQNLYCKFIFQLEDAS----NDGSIDSEEFSSVYAS 214
+ ++ +WI L + S + WQ Y +++F+L D S D +D E+ V
Sbjct: 78 EDIITLSDWIQLCQSSRKSVREPAWQKAYVEYMFKLLDESVSFSGDHLVDQAEYVQVLGY 137
Query: 213 FGLDKAEAASAFQKLS---KGK--SSVSFAEFQELFKEYFASEDVNAPGNFVFGK 64
FG+++ +++ F + + +G+ +S+ +F L+K++F SED ++PGN++ GK
Sbjct: 138 FGVNRKDSSHCFDQFAFNHQGQLINSIDKKKFHVLWKQFFHSEDPSSPGNWLLGK 192
>Z36753-2|CAE48510.1| 163|Caenorhabditis elegans Hypothetical
protein T09A5.1b protein.
Length = 163
Score = 56.8 bits (131), Expect = 1e-08
Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -2
Query: 552 FTAFFDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSA-DTDN 376
FT FFD + +G I+ KDF+ IE I + RG + + + L +W ++ A +
Sbjct: 20 FTTFFDLDQNGLIEWKDFKDLIEVIGEVRGRRSD--FFMTARLCLPDIWQKMTEAIGKEE 77
Query: 375 DGQVSKEEWISLWEKFSSSPSD--WQNLYCKFIFQLEDA----SNDGSIDSEEFSSVYAS 214
+ ++ +WI L + S + WQ Y +++F+L D S D +D E+ V
Sbjct: 78 EDIITLSDWIQLCQSSRKSVREPAWQKAYVEYMFKLLDESVSFSGDHLVDQAEYVQVLGY 137
Query: 213 FGLDKAEAASAFQKLS 166
FG+++ +++ F + +
Sbjct: 138 FGVNRKDSSHCFDQFA 153
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Frame = -2
Query: 540 FDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQVS 361
FDT+GSG I ++ + A+ I G A A+ V + D D +G++
Sbjct: 60 FDTDGSGAIGNEELKQAMISI----GLHANKAEIDNV----------IKEVDADGNGEID 105
Query: 360 KEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFG-LDKAEAAS 184
EE+ + +K + + F++ D +G I EF + FG D A
Sbjct: 106 FEEFCACMKKSQNIVKSTNEELIRECFEIFDQDRNGIITENEFKYIAKEFGDFDDELAEK 165
Query: 183 AFQKLS-KGKSSVSFAEFQELFKEYFASE 100
F++L +S +F + ++Y ++
Sbjct: 166 VFRELDVSANGHLSADQFATIVEDYLLND 194
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Frame = -2
Query: 387 DTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVY---A 217
DTD G++SKEE+++ + + + L + F+ D+ DG+I +E + + A
Sbjct: 68 DTDKTGKISKEEFVNYMKSPPIHRTTLRELEVQ--FRKFDSDGDGAITEDEMAEILRRTA 125
Query: 216 SFGLDKAEAASAFQKLS-KGKSSVSFAEFQELFKE 115
G D+A + F+ G ++F EF ++ +E
Sbjct: 126 DLG-DRAAISDMFKATDLNGDGKITFFEFVKMMQE 159
Score = 31.5 bits (68), Expect = 0.43
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = -2
Query: 387 DTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFG 208
D D DG++S+ E +L + P+ + FIF D G I EEF + S
Sbjct: 32 DVDKDGRLSRNEIAALLRTINVEPT---RVELDFIFGEMDTDKTGKISKEEFVNYMKSPP 88
Query: 207 LDKA---EAASAFQKL-SKGKSSVSFAEFQELFK 118
+ + E F+K S G +++ E E+ +
Sbjct: 89 IHRTTLRELEVQFRKFDSDGDGAITEDEMAEILR 122
>Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical
protein F10G8.5 protein.
Length = 190
Score = 34.3 bits (75), Expect = 0.060
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = -2
Query: 372 GQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEF 232
G ++KE++I +++ F PS +C+ +F+ D N G ID +EF
Sbjct: 43 GHLTKEQFIKVYKDFF--PSGSAEGFCEHVFRTFDTDNSGFIDFKEF 87
Score = 33.5 bits (73), Expect = 0.11
Identities = 29/103 (28%), Positives = 45/103 (43%)
Frame = -2
Query: 540 FDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQVS 361
FDT+ SG ID K+F LAI S+G + K + DG + D ++
Sbjct: 74 FDTDNSGFIDFKEFLLAINVT------SSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKII 127
Query: 360 KEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEF 232
+ + L + + S D K IF+ D +ND + +EF
Sbjct: 128 EAIYEMLGPEVTKSADDSPRKRAKMIFEKMDVNNDKELTLKEF 170
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 34.3 bits (75), Expect = 0.060
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = -2
Query: 387 DTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFG 208
D + DG + +EE ++ +K SP++ + +FQ D DG+ID +EF + +
Sbjct: 31 DLNGDGYIQREELRAVMQKMGQSPTEDE---LDAMFQAADKDCDGNIDFQEFLVIAKANP 87
Query: 207 LDKAEAASAFQKLS-KGKSSVSFAEFQELFK 118
L + A F++L G ++ +E + F+
Sbjct: 88 LSLSLKA-VFEELDVDGDGYITRSELRTAFQ 117
Score = 33.9 bits (74), Expect = 0.080
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = -2
Query: 387 DTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEF 232
D D DG +++ E + +++ S SD Q++ K I++ D +NDG I+ +EF
Sbjct: 100 DVDGDGYITRSELRTAFQRMGHSLSD-QDI--KAIYRHVDQNNDGKINFQEF 148
>L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 190
Score = 34.3 bits (75), Expect = 0.060
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = -2
Query: 372 GQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEF 232
G ++KE++I +++ F PS +C+ +F+ D N G ID +EF
Sbjct: 43 GHLTKEQFIKVYKDFF--PSGSAEGFCEHVFRTFDTDNSGFIDFKEF 87
Score = 33.5 bits (73), Expect = 0.11
Identities = 29/103 (28%), Positives = 45/103 (43%)
Frame = -2
Query: 540 FDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQVS 361
FDT+ SG ID K+F LAI S+G + K + DG + D ++
Sbjct: 74 FDTDNSGFIDFKEFLLAINVT------SSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKII 127
Query: 360 KEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEF 232
+ + L + + S D K IF+ D +ND + +EF
Sbjct: 128 EAIYEMLGPEVTKSADDSPRKRAKMIFEKMDVNNDKELTLKEF 170
>AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical
protein M04F3.4 protein.
Length = 172
Score = 33.9 bits (74), Expect = 0.080
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = -2
Query: 396 SSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVY 220
SS D D GQ+S +E + + +P + + C+ + + D++ DG+I+ +EF +++
Sbjct: 13 SSVDKDRSGQISSDELQTALSNGTWNPFNPET--CRLMIGMFDSNGDGAINFQEFQALW 69
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 33.1 bits (72), Expect = 0.14
Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Frame = -2
Query: 540 FDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQVS 361
FD +G+GTI K+ +A+ ++ G + + Q E+ + D D +GQV
Sbjct: 38 FDKDGNGTISIKELGVAM----RALGQNPTEQQMMEI----------IHDVDLDGNGQVE 83
Query: 360 KEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGL--DKAEAA 187
E+ + ++ +D + + + F++ D +G I + EF + G+ D+ E
Sbjct: 84 FPEFCVMMKRIMKE-TDSEMI--REAFKIFDRDGNGVITANEFKLFMINMGMCFDEVEVE 140
Query: 186 SAFQKLS-KGKSSVSFAEFQELF 121
++ G + + EF ++F
Sbjct: 141 EMMNEVDCDGNGEIDYEEFVKIF 163
>Z77134-4|CAE17934.1| 148|Caenorhabditis elegans Hypothetical
protein R09H10.6 protein.
Length = 148
Score = 32.7 bits (71), Expect = 0.18
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 540 FDTNGSGTIDKKDFELAIERISKSR 466
FDTNG GT+ KK++E +R+ K +
Sbjct: 74 FDTNGDGTVTKKEYEEYFKRLEKHK 98
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = -2
Query: 540 FDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQVS 361
+D++G+G +DK + + IE++ + D E++ + ++ + D DNDG VS
Sbjct: 182 YDSDGNGFLDKSEIDGIIEQMMNVARYQQWDTI--ELEQVIRQM---MVDIDYDNDGIVS 236
Query: 360 KEEW 349
+EW
Sbjct: 237 FDEW 240
>AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical
protein H10E21.4 protein.
Length = 236
Score = 32.3 bits (70), Expect = 0.24
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Frame = -2
Query: 414 KVWDG-LSSADTDNDGQVSKEEW---ISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSI 247
++ DG LS ADT+ DGQ++ E+ +S K S SP++ Q + DA+ D +
Sbjct: 116 RIIDGILSIADTNRDGQLTYAEFKNHLSSGAK-SLSPAEEQRNQALQLLSFIDANGDNKL 174
Query: 246 DSEE---FSSVYASFGLDKAEAASAFQKLSKGK 157
D E FS ++ + K++ F L K +
Sbjct: 175 DQLELYTFSQKTSTNKVTKSDVQQIFAMLDKNQ 207
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 31.5 bits (68), Expect = 0.43
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -2
Query: 291 KFIFQLEDASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEY 112
K F + D + DG ID + +YAS G A + + + ++F F LF E
Sbjct: 30 KEAFGIMDQNKDGIIDKSDLKDLYASMG-QIAPDSQIDAMIKEASGPINFTVFLTLFGER 88
Query: 111 FASEDVNA 88
D A
Sbjct: 89 LTGTDPEA 96
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 31.5 bits (68), Expect = 0.43
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -2
Query: 291 KFIFQLEDASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEY 112
K F + D + DG ID + +YAS G A + + + ++F F LF E
Sbjct: 30 KEAFGIMDQNKDGIIDKSDLKDLYASMG-QIAPDSQIDAMIKEASGPINFTVFLTLFGER 88
Query: 111 FASEDVNA 88
D A
Sbjct: 89 LTGTDPEA 96
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 31.5 bits (68), Expect = 0.43
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -2
Query: 291 KFIFQLEDASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEY 112
K F + D + DG ID + +YAS G A + + + ++F F LF E
Sbjct: 30 KEAFGIMDQNKDGIIDKSDLKDLYASMG-QIAPDSQIDAMIKEASGPINFTVFLTLFGER 88
Query: 111 FASEDVNA 88
D A
Sbjct: 89 LTGTDPEA 96
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 31.5 bits (68), Expect = 0.43
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -2
Query: 291 KFIFQLEDASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEY 112
K F + D + DG ID + +YAS G A + + + ++F F LF E
Sbjct: 30 KEAFGIMDQNKDGIIDKSDLKDLYASMG-QIAPDSQIDAMIKEASGPINFTVFLTLFGER 88
Query: 111 FASEDVNA 88
D A
Sbjct: 89 LTGTDPEA 96
>AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein
phosphatase with EF-hands protein.
Length = 707
Score = 31.1 bits (67), Expect = 0.56
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = -2
Query: 447 AQYKEVQDTLLKVWDGLSSA----DTDNDGQVSKEEWISLWE---KFSSSPSDWQNLYCK 289
AQ K++ ++L + L + D DN GQVS +E+I E K++ P Q Y
Sbjct: 618 AQEKDIVESLYRHKSTLETLFRFMDKDNSGQVSMKEFIDACEVLGKYTKRP--LQTDYIS 675
Query: 288 FIFQLEDASNDGSIDSEEFSSVY 220
I + D + DG ID E +
Sbjct: 676 QIAESIDFNKDGFIDLNELLEAF 698
>AF003389-12|AAM22065.1| 572|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform b protein.
Length = 572
Score = 31.1 bits (67), Expect = 0.56
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = -2
Query: 447 AQYKEVQDTLLKVWDGLSSA----DTDNDGQVSKEEWISLWE---KFSSSPSDWQNLYCK 289
AQ K++ ++L + L + D DN GQVS +E+I E K++ P Q Y
Sbjct: 483 AQEKDIVESLYRHKSTLETLFRFMDKDNSGQVSMKEFIDACEVLGKYTKRP--LQTDYIS 540
Query: 288 FIFQLEDASNDGSIDSEEFSSVY 220
I + D + DG ID E +
Sbjct: 541 QIAESIDFNKDGFIDLNELLEAF 563
>AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform a protein.
Length = 707
Score = 31.1 bits (67), Expect = 0.56
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = -2
Query: 447 AQYKEVQDTLLKVWDGLSSA----DTDNDGQVSKEEWISLWE---KFSSSPSDWQNLYCK 289
AQ K++ ++L + L + D DN GQVS +E+I E K++ P Q Y
Sbjct: 618 AQEKDIVESLYRHKSTLETLFRFMDKDNSGQVSMKEFIDACEVLGKYTKRP--LQTDYIS 675
Query: 288 FIFQLEDASNDGSIDSEEFSSVY 220
I + D + DG ID E +
Sbjct: 676 QIAESIDFNKDGFIDLNELLEAF 698
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 30.3 bits (65), Expect = 0.98
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = -2
Query: 486 ERISKSRGWSAGDAQYKEVQDTLLKV 409
+R+++++GW + Q+K +QDTLLKV
Sbjct: 1001 KRLAQTQGWHYNE-QHKRIQDTLLKV 1025
>Z81522-8|CAB04231.2| 786|Caenorhabditis elegans Hypothetical
protein F32B4.8 protein.
Length = 786
Score = 29.9 bits (64), Expect = 1.3
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 5/128 (3%)
Frame = -2
Query: 453 GDAQYKEVQDTLLKVWDGLSSADTDNDGQVSKE--EWISLWEKFSSSPSDWQNLY--CKF 286
GD Y+E+ T V+ S+ D D + E E+++ ++ S S S+ + +
Sbjct: 96 GDLDYREMTVTSSSVFPSTSTDDVDLQRALVDEASEFVTEFQPESESESESTSPFSASAS 155
Query: 285 IFQLEDASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFA-EFQELFKEYF 109
IF A++ + FS F A S F S SFA F ++ F
Sbjct: 156 IFATPIATSTEGFEKNSFSRSSPYFKAFPTAATSQFVSSHVATSQNSFATSFNDVTAPDF 215
Query: 108 ASEDVNAP 85
++E+ + P
Sbjct: 216 STENPSTP 223
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 285 IFQLEDASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSS---VSFAEFQELFKE 115
+F D DG IDS++ + + L+ EA A ++SK ++S ++ EF ++K+
Sbjct: 13 VFHFHDTLGDGKIDSKQLPTALRAMMLNPTEALLA--EVSKARTSGARITVEEFIPIYKK 70
Query: 114 YFAS 103
A+
Sbjct: 71 VEAA 74
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/67 (35%), Positives = 34/67 (50%)
Frame = -3
Query: 413 RSGMG*AALTPITTAKSPKKSGFPSGRSFPAAPVTGRIYTASLYFNLRMLVMTGPSTARN 234
+SGM +TPI+ A + ++SG +GR+ P R+YT F ML P R
Sbjct: 843 KSGMDSLVVTPISQAAAKQRSG-RAGRTGPGK--CYRLYTERA-FRDEMLPTPVPEIQRT 898
Query: 233 SLRSTHL 213
+L ST L
Sbjct: 899 NLASTLL 905
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/67 (35%), Positives = 34/67 (50%)
Frame = -3
Query: 413 RSGMG*AALTPITTAKSPKKSGFPSGRSFPAAPVTGRIYTASLYFNLRMLVMTGPSTARN 234
+SGM +TPI+ A + ++SG +GR+ P R+YT F ML P R
Sbjct: 843 KSGMDSLVVTPISQAAAKQRSG-RAGRTGPGK--CYRLYTERA-FRDEMLPTPVPEIQRT 898
Query: 233 SLRSTHL 213
+L ST L
Sbjct: 899 NLASTLL 905
>U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform a protein.
Length = 491
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = -2
Query: 384 TDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGL 205
+++ S E W SL+EK S DW+ + F ++ + + ++ + FG
Sbjct: 243 SESQSSFSMERWRSLYEKLKKSNLDWKLIVVCFFVRMAVSFSHSTLSTIGSILYMVMFGW 302
Query: 204 DKA 196
D A
Sbjct: 303 DGA 305
>U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform b protein.
Length = 589
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = -2
Query: 384 TDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGL 205
+++ S E W SL+EK S DW+ + F ++ + + ++ + FG
Sbjct: 243 SESQSSFSMERWRSLYEKLKKSNLDWKLIVVCFFVRMAVSFSHSTLSTIGSILYMVMFGW 302
Query: 204 DKA 196
D A
Sbjct: 303 DGA 305
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = -2
Query: 396 SSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSV 223
S+ADT DG +S EE+ + +E SP LY F+L D + +I +EF +V
Sbjct: 103 SAADTTKDGDISFEEFCA-FEALLCSP---DALYLT-AFELFDRNASDTISCDEFEAV 155
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -3
Query: 254 GPSTARNSLRSTHLLV*TRLKLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETL 75
G S A N LRS HL R ++H F P + L P ++ + S ++++ TP+ T+
Sbjct: 800 GASEAANHLRSVHLF--ARPRIHLQFMK-PSTNDLIPITSAPSDSLALAIIPSTTPVTTI 856
>U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical
protein M03F4.7a protein.
Length = 314
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Frame = -2
Query: 411 VWDGLSSADTDNDGQVSKEEWISL------WEKFSSSPSDWQNLYCKFIFQLEDASNDGS 250
V + + D + DG V +E+I + + + DW + + D DG
Sbjct: 186 VAETVDDIDKNKDGSVDLDEYIGDMYRPDDYPELNGKEPDWVQSEREMFKEHRDKDGDGK 245
Query: 249 IDSEEFSSVYASFGLDKAEA 190
++ EE G D AEA
Sbjct: 246 LNQEEMRDWIMPVGFDHAEA 265
>AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-like
protein protein.
Length = 314
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Frame = -2
Query: 411 VWDGLSSADTDNDGQVSKEEWISL------WEKFSSSPSDWQNLYCKFIFQLEDASNDGS 250
V + + D + DG V +E+I + + + DW + + D DG
Sbjct: 186 VAETVDDIDKNKDGSVDLDEYIGDMYRPDDYPELNGKEPDWVQSEREMFKEHRDKDGDGK 245
Query: 249 IDSEEFSSVYASFGLDKAEA 190
++ EE G D AEA
Sbjct: 246 LNQEEMRDWIMPVGFDHAEA 265
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 28.3 bits (60), Expect = 4.0
Identities = 28/108 (25%), Positives = 50/108 (46%)
Frame = -2
Query: 537 DTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQVSK 358
D +GSGTID +F ++R++K E+ +V+D D +G ++
Sbjct: 81 DIDGSGTIDFGEFCQMMKRMNKEND--------SEMIREAFRVFD------RDGNGFITA 126
Query: 357 EEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYAS 214
+E+ SD + + I ++ D DG ID EEF+S +++
Sbjct: 127 DEFRYFMTHMGDQFSDQE--VDEIIAEI-DIDGDGQIDYEEFASTFSA 171
>L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical
protein C50C3.5 protein.
Length = 202
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -2
Query: 285 IFQLEDASNDGSIDSEEFSSVYASFGLD-KAEAASAFQKLS--KGKSSVSFAEF 133
IFQL D G+I S E + + G+D + A + S G + F EF
Sbjct: 55 IFQLMDDDGSGTISSSEVAKMLNELGIDVSPKVVQAVMRSSDVSGDGQIDFEEF 108
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/77 (24%), Positives = 31/77 (40%)
Frame = -2
Query: 444 QYKEVQDTLLKVWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDA 265
+Y+ + + KV+ D D G +S E + + S + + + D
Sbjct: 41 RYEVSKQEVEKVFKIFQLMDDDGSGTISSSEVAKMLNELGIDVSP---KVVQAVMRSSDV 97
Query: 264 SNDGSIDSEEFSSVYAS 214
S DG ID EEF + S
Sbjct: 98 SGDGQIDFEEFLAAVTS 114
>AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical
protein Y67H2A.4a protein.
Length = 561
Score = 28.3 bits (60), Expect = 4.0
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Frame = -2
Query: 540 FDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQVS 361
FD +G+G +DK++F ++++ S+ + G + + S+ +T G+
Sbjct: 310 FDVDGNGALDKEEF-TKVQQLIMSQ-TTVGQRHRDHITPNQSFRVETNSALETYFFGKDG 367
Query: 360 KEEWISLWEKFSSSPSDWQNLYCKFIFQLEDA--SNDGSIDSEEFSS---VYASFGLDKA 196
K S EKF Q+ K F+ DA + DG I+ + F+ ++A K
Sbjct: 368 KGSLSS--EKFIEFQERLQHDILKMEFERRDALDNPDGLINEDSFAQLLLLHAQINEKKQ 425
Query: 195 E-AASAFQKLSKGKS--SVSFAEFQELFKEYFASEDVNAPGNF 76
+ ++ KG++ +SF E + F+ + +DV+ +F
Sbjct: 426 KHMLKRVKRRFKGENLKGISFGETKAFFEFLYHIDDVDIALHF 468
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 28.3 bits (60), Expect = 4.0
Identities = 28/108 (25%), Positives = 50/108 (46%)
Frame = -2
Query: 537 DTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQVSK 358
D +GSGTID +F ++R++K E+ +V+D D +G ++
Sbjct: 81 DIDGSGTIDFGEFCQMMKRMNKEND--------SEMIREAFRVFD------RDGNGFITA 126
Query: 357 EEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYAS 214
+E+ SD + + I ++ D DG ID EEF+S +++
Sbjct: 127 DEFRYFMTHMGDQFSDQE--VDEIIAEI-DIDGDGQIDYEEFASTFSA 171
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/116 (19%), Positives = 53/116 (45%)
Frame = -2
Query: 540 FDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQVS 361
FD +G+GTI K+ +A+ + ++ T ++ + ++ D D +GQ+
Sbjct: 90 FDKDGNGTISTKELGIAMRSLGQN--------------PTEQEILEMINEVDIDGNGQIE 135
Query: 360 KEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGLDKAE 193
E+ + ++ +D + + + F++ D +G I ++EF G+ +E
Sbjct: 136 FPEFCVMMKRMMKE-TDSEMI--REAFRVFDKDGNGVITAQEFRYFMVHMGMQFSE 188
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/116 (19%), Positives = 53/116 (45%)
Frame = -2
Query: 540 FDTNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGLSSADTDNDGQVS 361
FD +G+GTI K+ +A+ + ++ T ++ + ++ D D +GQ+
Sbjct: 33 FDKDGNGTISTKELGIAMRSLGQN--------------PTEQEILEMINEVDIDGNGQIE 78
Query: 360 KEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGLDKAE 193
E+ + ++ +D + + + F++ D +G I ++EF G+ +E
Sbjct: 79 FPEFCVMMKRMMKE-TDSEMI--REAFRVFDKDGNGVITAQEFRYFMVHMGMQFSE 131
>U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 3 protein.
Length = 199
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -2
Query: 372 GQVSKEEWISLWEKFSSSPSDWQNLYCKFIFQLEDASNDGSIDSEEF 232
G++ EE+ ++++F P+ + + F+F + D ++DG I EF
Sbjct: 51 GELKMEEFQGIYKQFF--PNGDPSKFAAFVFNVFDDNHDGHISFSEF 95
>Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical
protein F40F9.8 protein.
Length = 137
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 270 DASNDGSIDSEEFSSVYASFGLD--KAEAASAFQKLSKGKSSVSF 142
D +DG I++++ S V SFGL+ + E ++ +K VSF
Sbjct: 3 DEDSDGLIETDDVSHVLRSFGLNPSQTELQLVSEQTAKKNGRVSF 47
>Z49130-2|CAA88966.1| 396|Caenorhabditis elegans Hypothetical
protein T06D8.3 protein.
Length = 396
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 423 CLELLCTEHLQHSSLSIWISFQWQVQSPFYQWFR 524
C +LC + + H ++ Q + SPF+ WFR
Sbjct: 293 CYCVLCFQEVYHMTIERTPIVQEERVSPFFSWFR 326
>AL033536-10|CAN86926.1| 345|Caenorhabditis elegans Hypothetical
protein Y53C10A.6b protein.
Length = 345
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -2
Query: 309 WQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGLDKA--EAASAFQKLSKGKSSVSFAE 136
W+ CK+I LE D +D + + + LDK+ K+ + +S + + E
Sbjct: 182 WREHVCKYIKDLEAFETDNLMDLSDEQKEFINVLLDKSTKTVPQIDAKIEQKRSQIGYEE 241
Query: 135 FQELFKEYF 109
Q+ F+ ++
Sbjct: 242 EQD-FEPFY 249
>AL033536-9|CAA22140.1| 344|Caenorhabditis elegans Hypothetical
protein Y53C10A.6a protein.
Length = 344
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -2
Query: 309 WQNLYCKFIFQLEDASNDGSIDSEEFSSVYASFGLDKA--EAASAFQKLSKGKSSVSFAE 136
W+ CK+I LE D +D + + + LDK+ K+ + +S + + E
Sbjct: 182 WREHVCKYIKDLEAFETDNLMDLSDEQKEFINVLLDKSTKTVPQIDAKIEQKRSQIGYEE 241
Query: 135 FQELFKEYF 109
Q+ F+ ++
Sbjct: 242 EQD-FEPFY 249
>AC006695-17|AAF39983.2| 327|Caenorhabditis elegans Hypothetical
protein W06H8.6 protein.
Length = 327
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 534 TNGSGTIDKKDFELAIERISKSRGWSAGDAQYKEVQDTLLKVWDGL 397
T+ SG + +FE+ E +K+ WS+GD+ VQD+ D L
Sbjct: 207 TDFSGMMFGDEFEME-EAETKTWSWSSGDSILDSVQDSKSNSMDAL 251
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 546 AFFDTNGSGTIDKKDFELAIERISKSRGWSAGDA-QY 439
++FDTN SGT+ K F+ +ER+ + G G A QY
Sbjct: 185 SWFDTNHSGTLATKLFD-NLERVKEGTGDKIGMAFQY 220
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 546 AFFDTNGSGTIDKKDFELAIERISKSRGWSAGDA-QY 439
++FDTN SGT+ K F+ +ER+ + G G A QY
Sbjct: 185 SWFDTNHSGTLATKLFD-NLERVKEGTGDKIGMAFQY 220
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -2
Query: 426 DTLLKVWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYC----KFIFQLEDASN 259
D LK+ D L+++ D +++ WIS E + S Q +Y ++ D +N
Sbjct: 4185 DMFLKLKD-LTTSQAFQDFDTNQDGWISPKEFQRAMES--QKMYTVEDITYLMMCTDVNN 4241
Query: 258 DGSIDSEEFS 229
DG +D EF+
Sbjct: 4242 DGKVDYMEFT 4251
>U28991-3|AAK68309.1| 298|Caenorhabditis elegans Hypothetical
protein F08F8.6 protein.
Length = 298
Score = 27.1 bits (57), Expect = 9.1
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = -3
Query: 545 LSSTPMAAEPLIKRTLNLPLKGYPNREAGVLEMLSTKKFKTRF*RSGMG*AALTPITTAK 366
L TP +E +K+TL PNR+ E++ T K T+ +G G + + TA
Sbjct: 184 LQKTPKESETDLKKTLPRSPPPIPNRKQPSREIMLTPKQSTKTANAG-GRSKEPSLNTAM 242
Query: 365 SPKKSGFPSGRSFPAAPVTG 306
S +++G R P+ G
Sbjct: 243 S-QEAGNIEPRKTPSKDTIG 261
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -2
Query: 426 DTLLKVWDGLSSADTDNDGQVSKEEWISLWEKFSSSPSDWQNLYC----KFIFQLEDASN 259
D LK+ D L+++ D +++ WIS E + S Q +Y ++ D +N
Sbjct: 4177 DMFLKLKD-LTTSQAFQDFDTNQDGWISPKEFQRAMES--QKMYTVEDITYLMMCTDVNN 4233
Query: 258 DGSIDSEEFS 229
DG +D EF+
Sbjct: 4234 DGKVDYMEFT 4243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,299,378
Number of Sequences: 27780
Number of extensions: 289504
Number of successful extensions: 1031
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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