Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12c24
(622 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY121685-1|AAM52012.1| 539|Drosophila melanogaster RE36877p pro... 117 1e-26
AE013599-2222|AAF58040.2| 539|Drosophila melanogaster CG15706-P... 117 1e-26
BT003244-1|AAO25001.1| 588|Drosophila melanogaster LD37218p pro... 84 1e-16
AY060927-1|AAL28475.1| 189|Drosophila melanogaster GM06782p pro... 84 1e-16
AE014296-2002|AAF50028.1| 575|Drosophila melanogaster CG7334-PA... 84 1e-16
AE014296-2001|AAS65032.1| 596|Drosophila melanogaster CG7334-PB... 84 1e-16
AY094862-1|AAM11215.1| 762|Drosophila melanogaster RE22711p pro... 57 2e-08
AE013599-1939|AAF58217.1| 762|Drosophila melanogaster CG12858-P... 57 2e-08
AY128419-1|AAM75012.1| 741|Drosophila melanogaster GH14073p pro... 36 0.044
AF239609-1|AAF63501.1| 741|Drosophila melanogaster SP1173 protein. 36 0.044
AE014296-1144|AAN12079.1| 741|Drosophila melanogaster CG10121-P... 36 0.044
AE014296-1143|AAN12078.1| 741|Drosophila melanogaster CG10121-P... 36 0.044
AE014296-1142|AAF50650.1| 741|Drosophila melanogaster CG10121-P... 36 0.044
AE014296-1141|AAN12077.1| 741|Drosophila melanogaster CG10121-P... 36 0.044
BT021962-1|AAX94783.1| 901|Drosophila melanogaster LD03464p pro... 31 1.3
BT016060-1|AAV36945.1| 535|Drosophila melanogaster LP14756p pro... 31 1.3
AE014298-946|AAF46196.1| 535|Drosophila melanogaster CG14439-PA... 31 1.3
AE013599-1446|AAM68665.1| 837|Drosophila melanogaster CG8841-PC... 31 1.3
AE013599-1445|AAM68664.1| 837|Drosophila melanogaster CG8841-PB... 31 1.3
AE013599-1444|AAF58533.1| 837|Drosophila melanogaster CG8841-PA... 31 1.3
AE013599-1753|AAF58348.1| 883|Drosophila melanogaster CG6197-PA... 30 2.2
BT022325-1|AAY54741.1| 131|Drosophila melanogaster IP04544p pro... 30 2.9
AE014297-2857|AAF55804.1| 136|Drosophila melanogaster CG15690-P... 30 2.9
>AY121685-1|AAM52012.1| 539|Drosophila melanogaster RE36877p
protein.
Length = 539
Score = 117 bits (281), Expect = 1e-26
Identities = 58/113 (51%), Positives = 74/113 (65%)
Frame = -3
Query: 620 FFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATI 441
FFF SGKIIK+ GY ++ F Y +R++LI++I NPW LV +E QG TYALCY I
Sbjct: 377 FFFYSGKIIKKLGYVHCMSMCFFFYAVRLSLIAWIPNPWYLVGVELFFQGITYALCYTCI 436
Query: 440 VGYAAHVAPDGYSATVQGIVAGMDDGVGFAXXXXXXXXXXXXXXGRYSFRVFS 282
V YA+ VAP G SATVQG++AGMDDG+GF+ GR SF+ F+
Sbjct: 437 VAYASAVAPPGTSATVQGLMAGMDDGLGFSIGSLIGGLMFKSLGGRESFKYFA 489
>AE013599-2222|AAF58040.2| 539|Drosophila melanogaster CG15706-PA
protein.
Length = 539
Score = 117 bits (281), Expect = 1e-26
Identities = 58/113 (51%), Positives = 74/113 (65%)
Frame = -3
Query: 620 FFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATI 441
FFF SGKIIK+ GY ++ F Y +R++LI++I NPW LV +E QG TYALCY I
Sbjct: 377 FFFYSGKIIKKLGYVHCMSMCFFFYAVRLSLIAWIPNPWYLVGVELFFQGITYALCYTCI 436
Query: 440 VGYAAHVAPDGYSATVQGIVAGMDDGVGFAXXXXXXXXXXXXXXGRYSFRVFS 282
V YA+ VAP G SATVQG++AGMDDG+GF+ GR SF+ F+
Sbjct: 437 VAYASAVAPPGTSATVQGLMAGMDDGLGFSIGSLIGGLMFKSLGGRESFKYFA 489
>BT003244-1|AAO25001.1| 588|Drosophila melanogaster LD37218p
protein.
Length = 588
Score = 84.2 bits (199), Expect = 1e-16
Identities = 42/112 (37%), Positives = 64/112 (57%)
Frame = -3
Query: 620 FFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATI 441
FFF SG I+K+ G+ ++ LF +G+R L S ++NPW ++ IE +M G T+ L YAT+
Sbjct: 427 FFFLSGWILKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIE-LMNGVTFGLFYATM 485
Query: 440 VGYAAHVAPDGYSATVQGIVAGMDDGVGFAXXXXXXXXXXXXXXGRYSFRVF 285
YA+ VAP G AT+Q +V + +GVG + R +F +F
Sbjct: 486 ASYASIVAPPGTDATMQSLVGAIFEGVGVSMGNLIAGQLFESVTARTTFEIF 537
>AY060927-1|AAL28475.1| 189|Drosophila melanogaster GM06782p
protein.
Length = 189
Score = 84.2 bits (199), Expect = 1e-16
Identities = 42/112 (37%), Positives = 64/112 (57%)
Frame = -3
Query: 620 FFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATI 441
FFF SG I+K+ G+ ++ LF +G+R L S ++NPW ++ IE +M G T+ L YAT+
Sbjct: 12 FFFLSGWILKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIE-LMNGVTFGLFYATM 70
Query: 440 VGYAAHVAPDGYSATVQGIVAGMDDGVGFAXXXXXXXXXXXXXXGRYSFRVF 285
YA+ VAP G AT+Q +V + +GVG + R +F +F
Sbjct: 71 ASYASIVAPPGTDATMQSLVGAIFEGVGVSMGSLIAGQLFETVTARTTFEIF 122
>AE014296-2002|AAF50028.1| 575|Drosophila melanogaster CG7334-PA,
isoform A protein.
Length = 575
Score = 84.2 bits (199), Expect = 1e-16
Identities = 42/112 (37%), Positives = 64/112 (57%)
Frame = -3
Query: 620 FFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATI 441
FFF SG I+K+ G+ ++ LF +G+R L S ++NPW ++ IE +M G T+ L YAT+
Sbjct: 398 FFFLSGWILKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIE-LMNGVTFGLFYATM 456
Query: 440 VGYAAHVAPDGYSATVQGIVAGMDDGVGFAXXXXXXXXXXXXXXGRYSFRVF 285
YA+ VAP G AT+Q +V + +GVG + R +F +F
Sbjct: 457 ASYASIVAPPGTDATMQSLVGAIFEGVGVSMGSLIAGQLFESVTARTTFEIF 508
>AE014296-2001|AAS65032.1| 596|Drosophila melanogaster CG7334-PB,
isoform B protein.
Length = 596
Score = 84.2 bits (199), Expect = 1e-16
Identities = 42/112 (37%), Positives = 64/112 (57%)
Frame = -3
Query: 620 FFFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATI 441
FFF SG I+K+ G+ ++ LF +G+R L S ++NPW ++ IE +M G T+ L YAT+
Sbjct: 419 FFFLSGWILKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIE-LMNGVTFGLFYATM 477
Query: 440 VGYAAHVAPDGYSATVQGIVAGMDDGVGFAXXXXXXXXXXXXXXGRYSFRVF 285
YA+ VAP G AT+Q +V + +GVG + R +F +F
Sbjct: 478 ASYASIVAPPGTDATMQSLVGAIFEGVGVSMGSLIAGQLFESVTARTTFEIF 529
>AY094862-1|AAM11215.1| 762|Drosophila melanogaster RE22711p
protein.
Length = 762
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/87 (33%), Positives = 47/87 (54%)
Frame = -3
Query: 617 FFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIV 438
+F S ++I + G+ L L +R IS++ NPW ++ E +MQG T+A +A
Sbjct: 558 YFFSFRLITQIGHVKVLCLGLIGNVLRFLYISYLTNPWMVLPFE-LMQGITHAAVWAASC 616
Query: 437 GYAAHVAPDGYSATVQGIVAGMDDGVG 357
Y AH P A+ QG++ G+ G+G
Sbjct: 617 SYIAHNTPKHLRASAQGVLQGIHHGLG 643
>AE013599-1939|AAF58217.1| 762|Drosophila melanogaster CG12858-PA
protein.
Length = 762
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/87 (33%), Positives = 47/87 (54%)
Frame = -3
Query: 617 FFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIV 438
+F S ++I + G+ L L +R IS++ NPW ++ E +MQG T+A +A
Sbjct: 558 YFFSFRLITQIGHVKVLCLGLIGNVLRFLYISYLTNPWMVLPFE-LMQGITHAAVWAASC 616
Query: 437 GYAAHVAPDGYSATVQGIVAGMDDGVG 357
Y AH P A+ QG++ G+ G+G
Sbjct: 617 SYIAHNTPKHLRASAQGVLQGIHHGLG 643
>AY128419-1|AAM75012.1| 741|Drosophila melanogaster GH14073p
protein.
Length = 741
Score = 35.9 bits (79), Expect = 0.044
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = -3
Query: 617 FFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIV 438
FF K I+ G+ L + IR +S + W V++E I + L + TI+
Sbjct: 537 FFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWITII 595
Query: 437 GYAAHVAPDGYSATVQGIVAGMDDGVG 357
Y H P +AT Q I G+G
Sbjct: 596 LYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AF239609-1|AAF63501.1| 741|Drosophila melanogaster SP1173 protein.
Length = 741
Score = 35.9 bits (79), Expect = 0.044
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = -3
Query: 617 FFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIV 438
FF K I+ G+ L + IR +S + W V++E I + L + TI+
Sbjct: 537 FFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWITII 595
Query: 437 GYAAHVAPDGYSATVQGIVAGMDDGVG 357
Y H P +AT Q I G+G
Sbjct: 596 LYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AE014296-1144|AAN12079.1| 741|Drosophila melanogaster CG10121-PD,
isoform D protein.
Length = 741
Score = 35.9 bits (79), Expect = 0.044
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = -3
Query: 617 FFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIV 438
FF K I+ G+ L + IR +S + W V++E I + L + TI+
Sbjct: 537 FFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWITII 595
Query: 437 GYAAHVAPDGYSATVQGIVAGMDDGVG 357
Y H P +AT Q I G+G
Sbjct: 596 LYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AE014296-1143|AAN12078.1| 741|Drosophila melanogaster CG10121-PC,
isoform C protein.
Length = 741
Score = 35.9 bits (79), Expect = 0.044
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = -3
Query: 617 FFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIV 438
FF K I+ G+ L + IR +S + W V++E I + L + TI+
Sbjct: 537 FFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWITII 595
Query: 437 GYAAHVAPDGYSATVQGIVAGMDDGVG 357
Y H P +AT Q I G+G
Sbjct: 596 LYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AE014296-1142|AAF50650.1| 741|Drosophila melanogaster CG10121-PB,
isoform B protein.
Length = 741
Score = 35.9 bits (79), Expect = 0.044
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = -3
Query: 617 FFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIV 438
FF K I+ G+ L + IR +S + W V++E I + L + TI+
Sbjct: 537 FFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWITII 595
Query: 437 GYAAHVAPDGYSATVQGIVAGMDDGVG 357
Y H P +AT Q I G+G
Sbjct: 596 LYMRHAMPRKLTATGQAIAVLAFFGLG 622
>AE014296-1141|AAN12077.1| 741|Drosophila melanogaster CG10121-PA,
isoform A protein.
Length = 741
Score = 35.9 bits (79), Expect = 0.044
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = -3
Query: 617 FFCSGKIIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIV 438
FF K I+ G+ L + IR +S + W V++E I + L + TI+
Sbjct: 537 FFNVDKFIEYCGHSNIFIGGLAIFVIRFTALSDAQTKWLTVIMETI-EPAVIGLIWITII 595
Query: 437 GYAAHVAPDGYSATVQGIVAGMDDGVG 357
Y H P +AT Q I G+G
Sbjct: 596 LYMRHAMPRKLTATGQAIAVLAFFGLG 622
>BT021962-1|AAX94783.1| 901|Drosophila melanogaster LD03464p
protein.
Length = 901
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 393 DSRRVTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 506
D+ + + R D+ V KGI R L+NPL Q+ LP
Sbjct: 370 DNLFINYLSRVHRDEDFHFVLKGITRLLNNPLVQNYLP 407
>BT016060-1|AAV36945.1| 535|Drosophila melanogaster LP14756p
protein.
Length = 535
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -3
Query: 569 LTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHVAPDGYSATVQ 390
LT +GI M L ++ WQLV++ IM C G + + P+ A V
Sbjct: 131 LTVCTVIFGIAMILQGTVKEYWQLVILRMIMAAGESG-CNPLATGIMSDIFPEDKRALVM 189
Query: 389 GIVA-GMDDGVGFA 351
I G+ G G A
Sbjct: 190 AIFNWGIYGGYGIA 203
>AE014298-946|AAF46196.1| 535|Drosophila melanogaster CG14439-PA
protein.
Length = 535
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -3
Query: 569 LTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHVAPDGYSATVQ 390
LT +GI M L ++ WQLV++ IM C G + + P+ A V
Sbjct: 131 LTVCTVIFGIAMILQGTVKEYWQLVILRMIMAAGESG-CNPLATGIMSDIFPEDKRALVM 189
Query: 389 GIVA-GMDDGVGFA 351
I G+ G G A
Sbjct: 190 AIFNWGIYGGYGIA 203
>AE013599-1446|AAM68665.1| 837|Drosophila melanogaster CG8841-PC,
isoform C protein.
Length = 837
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 393 DSRRVTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 506
D+ + + R D+ V KGI R L+NPL Q+ LP
Sbjct: 306 DNLFINYLSRVHRDEDFHFVLKGITRLLNNPLVQNYLP 343
>AE013599-1445|AAM68664.1| 837|Drosophila melanogaster CG8841-PB,
isoform B protein.
Length = 837
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 393 DSRRVTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 506
D+ + + R D+ V KGI R L+NPL Q+ LP
Sbjct: 306 DNLFINYLSRVHRDEDFHFVLKGITRLLNNPLVQNYLP 343
>AE013599-1444|AAF58533.1| 837|Drosophila melanogaster CG8841-PA,
isoform A protein.
Length = 837
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 393 DSRRVTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 506
D+ + + R D+ V KGI R L+NPL Q+ LP
Sbjct: 306 DNLFINYLSRVHRDEDFHFVLKGITRLLNNPLVQNYLP 343
>AE013599-1753|AAF58348.1| 883|Drosophila melanogaster CG6197-PA
protein.
Length = 883
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/96 (28%), Positives = 40/96 (41%)
Frame = +3
Query: 225 PIEFQEHRGVEDGRHHRQYAEHAEGISTAHRTVKLSA*QRAQGETHAVVHAGHYALDSRR 404
P E + R +H +Y +H + V + +RA E H L +RR
Sbjct: 21 PYEEEILRNAYSVKHWLRYIDHKA--KAPNNGVNMVY-ERALKELPGSYKIWHNYLRTRR 77
Query: 405 VTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLPRI 512
VRG + P Y V RAL ++ H++PRI
Sbjct: 78 KQVRGKIPTDPMYEEVNSAFERAL---VFMHKMPRI 110
>BT022325-1|AAY54741.1| 131|Drosophila melanogaster IP04544p
protein.
Length = 131
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +3
Query: 237 QEHRGVEDGRHHRQYAEHAEGISTAHRTVKLSA*QRAQGETHAVVHAGHYALDSRRVTVR 416
Q+H ++ HHRQ++ H + + H L+ R Q +H+ VH G D R T
Sbjct: 34 QQH--LQQQYHHRQHSLHQQHLQRQHSHTSLTKIHR-QSSSHS-VHGGGGRADHHRTTT- 88
Query: 417 GHMSRVPDY 443
G R+ Y
Sbjct: 89 GATGRLFSY 97
>AE014297-2857|AAF55804.1| 136|Drosophila melanogaster CG15690-PA
protein.
Length = 136
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +3
Query: 237 QEHRGVEDGRHHRQYAEHAEGISTAHRTVKLSA*QRAQGETHAVVHAGHYALDSRRVTVR 416
Q+H ++ HHRQ++ H + + H L+ R Q +H+ VH G D R T
Sbjct: 39 QQH--LQQQYHHRQHSLHQQHLQRQHSHTSLTKIHR-QSSSHS-VHGGGGRADHHRTTT- 93
Query: 417 GHMSRVPDY 443
G R+ Y
Sbjct: 94 GATGRLFSY 102
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,615,779
Number of Sequences: 53049
Number of extensions: 504327
Number of successful extensions: 1377
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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