Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12c22
(363 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 208 1e-54
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 208 1e-54
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 157 2e-39
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 156 5e-39
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 156 5e-39
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 100 3e-22
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 85 1e-17
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 77 5e-15
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 66 7e-12
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 66 7e-12
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 58 2e-09
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 48 3e-06
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 47 5e-06
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 45 1e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 44 4e-05
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 42 1e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 42 1e-04
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 40 4e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 4e-04
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.001
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 36 0.011
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 36 0.011
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.015
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 34 0.027
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 33 0.061
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 0.75
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 29 1.3
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 28 2.3
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 3.0
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 3.0
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 3.0
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 27 4.0
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 5.3
Z81474-5|CAB03906.1| 361|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 26 7.0
U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (dro... 26 7.0
AL009246-6|CAA15834.1| 155|Caenorhabditis elegans Hypothetical ... 26 7.0
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 26 7.0
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 26 9.3
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 208 bits (507), Expect = 1e-54
Identities = 100/106 (94%), Positives = 101/106 (95%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 139 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPR 2
IQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PR
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPR 106
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 208 bits (507), Expect = 1e-54
Identities = 100/106 (94%), Positives = 101/106 (95%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 139 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPR 2
IQKESTLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PR
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPR 106
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 157 bits (381), Expect = 2e-39
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 139 IQKESTLHLVLRLRGGTI 86
IQKESTLHLVLRLRGG I
Sbjct: 821 IQKESTLHLVLRLRGGDI 838
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 153 bits (372), Expect = 3e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 153 bits (372), Expect = 3e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 97.5 bits (232), Expect = 3e-21
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 179
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 156 bits (378), Expect = 5e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 139 IQKESTLHLVLRLRGG 92
IQKESTLHLVLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 156 bits (378), Expect = 5e-39
Identities = 76/78 (97%), Positives = 77/78 (98%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 139 IQKESTLHLVLRLRGGTI 86
IQK+STLHLVLRLRGG I
Sbjct: 821 IQKQSTLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 100 bits (240), Expect = 3e-22
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
M I VKTLTGK I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 139 IQKESTLHLVLRLRGG 92
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 85.4 bits (202), Expect = 1e-17
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 140
+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 139 IQKESTLHLVLRLR 98
I+ E +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234
Score = 40.7 bits (91), Expect = 3e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = -3
Query: 298 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 119
+TG IT VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 118 HL 113
L
Sbjct: 152 RL 153
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = -3
Query: 328 SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 212
S TM + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 56 SKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 76.6 bits (180), Expect = 5e-15
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 209
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 66.1 bits (154), Expect = 7e-12
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = -3
Query: 313 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 134
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 133 KESTLHLVLRLRGG 92
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 66.1 bits (154), Expect = 7e-12
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = -3
Query: 313 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 134
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 133 KESTLHLVLRLRGG 92
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 58.0 bits (134), Expect = 2e-09
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = -3
Query: 316 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 136 QKESTLHLVLR 104
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 47.6 bits (108), Expect = 3e-06
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLS 149
++I+V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 148 DYNIQKESTLHL 113
D + + STL L
Sbjct: 162 DNSFENGSTLRL 173
Score = 29.9 bits (64), Expect = 0.57
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 212
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEV 269
+ +FVKT TGKTIT+ +
Sbjct: 181 IDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 46.8 bits (106), Expect = 5e-06
Identities = 29/72 (40%), Positives = 38/72 (52%)
Frame = -3
Query: 316 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Q FV+ L GKT TL V ASDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 136 QKESTLHLVLRL 101
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = -3
Query: 313 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 176
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.6 bits (98), Expect = 4e-05
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = -3
Query: 295 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 116
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 115 L 113
L
Sbjct: 241 L 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = -3
Query: 298 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 119
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 118 HLVLRLRGG 92
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = -3
Query: 298 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 119
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 118 HLVLRLRGG 92
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 40.3 bits (90), Expect = 4e-04
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = -3
Query: 361 FLFLSKHVFHRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLI 188
FLF S + ++ + + +TLT LE+ TI VKA + ++G P+ Q+LI
Sbjct: 39 FLFCS-FINNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLI 97
Query: 187 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT-IEPS 77
+ GK L+D + + + ++L R T + PS
Sbjct: 98 YNGKILDDSVKVGEVGFDSSKFVVVMLSKRKVTEVAPS 135
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = -3
Query: 277 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 98
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -3
Query: 277 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 119
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 35.5 bits (78), Expect = 0.011
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = -3
Query: 322 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 143
T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 142 NIQKESTLHLVLR 104
I T+HLV R
Sbjct: 80 GISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 35.5 bits (78), Expect = 0.011
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = -3
Query: 322 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 143
T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 142 NIQKESTLHLVLR 104
I T+HLV R
Sbjct: 80 GISDGQTVHLVDR 92
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.015
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = -3
Query: 301 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 122
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 121 LHLVLR 104
+ L++R
Sbjct: 207 VELLVR 212
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 34.3 bits (75), Expect = 0.027
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = -3
Query: 304 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 125
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 124 TLHLV 110
+ L+
Sbjct: 73 QIMLL 77
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 33.1 bits (72), Expect = 0.061
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -3
Query: 298 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 119
L G I +E+++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 0.75
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 319 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 143
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 142 NIQK 131
IQ+
Sbjct: 56 KIQE 59
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -3
Query: 277 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 101
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYLKKKK 159
Query: 100 RGGTI 86
+ T+
Sbjct: 160 KLSTL 164
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/54 (20%), Positives = 29/54 (53%)
Frame = -3
Query: 325 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 164
+ +Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1147 DVLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical
protein Y57G11C.9c protein.
Length = 77
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 302 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 201
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 302 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 201
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 302 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 201
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.5 bits (58), Expect = 3.0
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 220 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 68
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1463 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1514
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 3.0
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 220 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 68
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 3.0
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 220 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 68
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 178 KQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 56
K ++D R L DY+ K ++L L +I+P LR L +K
Sbjct: 1173 KMIDDIRGLLDYDTAKIGQINLALYHFSDSIQPVLRRLDIK 1213
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 289 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 191
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
>Z81474-5|CAB03906.1| 361|Caenorhabditis elegans Hypothetical
protein C18D4.9 protein.
Length = 361
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -3
Query: 361 FLFLSKHVFHRSNTMQIFVKTLTGKT 284
+L+ ++H+ ++ ++ FVK L GKT
Sbjct: 320 YLWCNRHILFKNFKLKTFVKVLCGKT 345
>Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical
protein F45H7.2a protein.
Length = 842
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 323 HNANIRQNPYGEDHYIGGGS 264
H++N P G DH++ GGS
Sbjct: 49 HHSNTWSRPSGSDHHVYGGS 68
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 280 TLEVEASDTIENVKAKIQDKEGIPPDQQ 197
+L VE D IENV Q +PPD++
Sbjct: 229 SLVVEVIDEIENVPVNTQISPVMPPDEE 256
>U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin
(drosophila neuroligin-like) homolog protein 1 protein.
Length = 730
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 201 WSGGIPSLSWILALTFSIVSEASTSNVMVFPVRVLTNICIVLLL 332
W+ IP+L + TFS + A +MVF N+ I+ LL
Sbjct: 629 WNEYIPALVNYMTTTFSPENVAYRREIMVFKWITGVNVIIIALL 672
>AL009246-6|CAA15834.1| 155|Caenorhabditis elegans Hypothetical
protein C47F8.7 protein.
Length = 155
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = +2
Query: 254 SVGSFHLQCN----GLPRKGFDEYLHCVAPMKNVLGKKKK 361
S+ +H+QC G K D+YL C A K +L K
Sbjct: 12 SIAVWHVQCQPRCPGFVNKTADDYLKCKASNKVILAVSNK 51
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans homeobox
protein 44,isoform a protein.
Length = 1273
Score = 26.2 bits (55), Expect = 7.0
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 224 VLDFSFDIFDSVGSFHLQCNGL-PRKGFDEYLHCVAPM 334
+LD +F+I V L+ NG+ PR DEYLHC + M
Sbjct: 986 ILD-TFEIVYQVKGI-LEENGISPRVFGDEYLHCTSSM 1021
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 25.8 bits (54), Expect = 9.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 49 CEKMICRKCYARLHP 5
C++ CRKC A HP
Sbjct: 928 CDRSYCRKCLAEPHP 942
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,319,326
Number of Sequences: 27780
Number of extensions: 192369
Number of successful extensions: 585
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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