Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12c22
(363 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 30 0.010
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 27 0.090
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 26 0.16
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 25 0.21
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 24 0.48
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 0.84
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.1
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 1.5
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 2.6
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 3.4
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 3.4
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 3.4
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 4.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 5.9
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 20 7.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 20 7.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 20 7.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 20 7.8
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 20 7.8
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 20 7.8
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 29.9 bits (64), Expect = 0.010
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 13 DGHSIYGKSFSHSYTSWRECEGKVQLYLL*VSKPGEVWIL 132
DG+ + + SY + C+G +Y + V K G +WIL
Sbjct: 98 DGNPLIAPYPNWSYNDVKYCDGLTSVYRMQVDKCGRLWIL 137
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 26.6 bits (56), Expect = 0.090
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 262 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 152
+DT+ K KI K I PD + L+ KQ E G TL
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ-ETGVTL 767
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 25.8 bits (54), Expect = 0.16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 49 SYTSWRECEGKVQLYLL*VSKPGEVWIL 132
S+ ++++C G V Y + + K +WIL
Sbjct: 115 SWANYKDCSGIVSAYKIAIDKFDRLWIL 142
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 25.4 bits (53), Expect = 0.21
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1
Query: 49 SYTSWRECEGKVQLYLL*VSKPGEVWIL 132
S+ ++++C G V Y + + K +W+L
Sbjct: 115 SWANYKDCSGIVSAYKIAIDKFDRLWVL 142
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.2 bits (50), Expect = 0.48
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 266 SFRHYRKCQS*NPRQGRYSSRPTTSHLCRETIRRWPHS 153
S +H KC + +SS P +H CR W HS
Sbjct: 162 SVKHVAKCAT------DFSSWPYDTHRCRINFGSWVHS 193
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.4 bits (48), Expect = 0.84
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +1
Query: 49 SYTSWRECEGKVQLYLL*VSKPGEVWIL 132
S+ + +C G V + + V K +W+L
Sbjct: 117 SFAKYEDCSGIVSAFKIAVDKFDRLWVL 144
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 1.1
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = -3
Query: 268 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 89
++ DT E K +Q KEG Q+ F G L + + T+ ++ G
Sbjct: 931 KSQDTTEVTKYILQYKEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVIAEGPAGR 990
Query: 88 IEPSLRIL 65
PS ++
Sbjct: 991 SVPSAELI 998
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 1.1
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = -3
Query: 268 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 89
++ DT E K +Q KEG Q+ F G L + + T+ ++ G
Sbjct: 927 KSQDTTEVTKYILQYKEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVIAEGPAGR 986
Query: 88 IEPSLRIL 65
PS ++
Sbjct: 987 SVPSAELI 994
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/37 (24%), Positives = 18/37 (48%)
Frame = +2
Query: 8 MKTGIAFTANHFLTVILHGENAKGRFNCTSSKSQNQV 118
+ +G + ++ T+I + G NC SSK + +
Sbjct: 40 VSSGFRSSLRNYKTLISSHDELPGHINCDSSKFEEDL 76
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.8 bits (44), Expect = 2.6
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 61 WRECEGKVQLYLL 99
W++CEGK+ YL+
Sbjct: 200 WKQCEGKID-YLV 211
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.4 bits (43), Expect = 3.4
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +1
Query: 49 SYTSWRECEGKVQLYLL*VSKPGEVWIL 132
S+ + +C G V L + K +W+L
Sbjct: 111 SFAKYDDCSGIVSASKLAIDKCDRLWVL 138
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.4 bits (43), Expect = 3.4
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +1
Query: 49 SYTSWRECEGKVQLYLL*VSKPGEVWIL 132
S+ + +C G V L + K +W+L
Sbjct: 111 SFAKYDDCSGIVSASKLAIDKCDRLWVL 138
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.4 bits (43), Expect = 3.4
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +1
Query: 49 SYTSWRECEGKVQLYLL*VSKPGEVWIL 132
S+ + +C G V L + K +W+L
Sbjct: 111 SFAKYDDCSGIVSASKLAIDKCDRLWVL 138
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.0 bits (42), Expect = 4.5
Identities = 6/28 (21%), Positives = 15/28 (53%)
Frame = +1
Query: 49 SYTSWRECEGKVQLYLL*VSKPGEVWIL 132
S+ + +C G V + + + + +W+L
Sbjct: 116 SFAKYEDCSGIVSAHKIAIDEYERLWVL 143
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.6 bits (41), Expect = 5.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 260 GSFHLQCNGLPRKGFDEY 313
G+ +Q P KGF+EY
Sbjct: 394 GTLSVQPQANPVKGFEEY 411
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 121 VWILSGCYSLKECGHLLIVSRQR*DVV 201
+WI S SL+ ++ IVS D++
Sbjct: 79 IWIFSTSKSLRTPSNMFIVSLAIFDII 105
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 7.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +2
Query: 44 LTVILHGENAKGRFNCTSSKSQN 112
LT + + + +++CT KSQ+
Sbjct: 402 LTRAAYSRDVRPKYDCTLEKSQD 424
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 7.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +2
Query: 44 LTVILHGENAKGRFNCTSSKSQN 112
LT + + + +++CT KSQ+
Sbjct: 402 LTRAAYSRDVRPKYDCTLEKSQD 424
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 7.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +2
Query: 44 LTVILHGENAKGRFNCTSSKSQN 112
LT + + + +++CT KSQ+
Sbjct: 402 LTRAAYSRDVRPKYDCTLEKSQD 424
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 121 VWILSGCYSLKECGHLLIVSRQR*DVV 201
+WI S SL+ ++ IVS D++
Sbjct: 79 IWIFSTSKSLRTPSNMFIVSLAIFDII 105
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 20.2 bits (40), Expect = 7.8
Identities = 6/28 (21%), Positives = 15/28 (53%)
Frame = +1
Query: 49 SYTSWRECEGKVQLYLL*VSKPGEVWIL 132
S+ +++C V + + + K +W+L
Sbjct: 112 SFAEFKDCSKIVSAFKIAIDKFDRLWVL 139
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,001
Number of Sequences: 438
Number of extensions: 2181
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8556345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -