Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt12b17
         (684 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2...    30   8.8  
AK075099-1|BAC11400.1|  327|Homo sapiens protein ( Homo sapiens ...    30   8.8  
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.     30   8.8  

>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
            alpha-2-macroglobulin domain containing 8 protein.
          Length = 1885

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 81   TSVTTISVVAYYEPAFEISHFW 146
            TS   +SV  YYEPAFE + F+
Sbjct: 1638 TSALPVSVYDYYEPAFEATRFY 1659


>AK075099-1|BAC11400.1|  327|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90618 fis, clone PLACE1002355, weakly similar to
           COMPLEMENT C4 PRECURSOR. ).
          Length = 327

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 81  TSVTTISVVAYYEPAFEISHFW 146
           TS   +SV  YYEPAFE + F+
Sbjct: 150 TSALPVSVYDYYEPAFEATRFY 171


>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
          Length = 1884

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 81   TSVTTISVVAYYEPAFEISHFW 146
            TS   +SV  YYEPAFE + F+
Sbjct: 1637 TSALPVSVYDYYEPAFEATRFY 1658


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,159,876
Number of Sequences: 237096
Number of extensions: 1656384
Number of successful extensions: 2475
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2475
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)