Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12b08
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067616-4|AAC19193.1| 373|Caenorhabditis elegans Hypothetical ... 131 4e-31
U80952-3|AAB38093.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 32 0.40
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 32 0.40
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 32 0.40
AF039716-4|AAB96739.1| 616|Caenorhabditis elegans Aminopeptidas... 31 0.53
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 31 0.70
Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical pr... 31 0.93
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 31 0.93
Z73896-6|CAA98055.1| 356|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical pr... 29 2.1
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 29 2.1
U41533-12|AAA83173.1| 521|Caenorhabditis elegans Hypothetical p... 29 2.8
AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 29 3.7
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 29 3.7
Z73896-7|CAO82025.1| 310|Caenorhabditis elegans Hypothetical pr... 28 4.9
U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical pr... 28 4.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 4.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 4.9
Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81047-6|CAB02833.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 6.5
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 6.5
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr... 28 6.5
AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical... 28 6.5
AC024794-2|AAK68498.1| 618|Caenorhabditis elegans Hypothetical ... 28 6.5
AC006693-7|AAF60385.1| 201|Caenorhabditis elegans Hypothetical ... 28 6.5
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 27 8.6
U70849-6|ABD63227.1| 284|Caenorhabditis elegans Phosphatidylser... 27 8.6
U70849-5|AAF99922.2| 400|Caenorhabditis elegans Phosphatidylser... 27 8.6
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 8.6
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 27 8.6
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 27 8.6
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 27 8.6
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 27 8.6
AF078785-4|AAC27089.3| 609|Caenorhabditis elegans Hypothetical ... 27 8.6
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 27 8.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 8.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 8.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 8.6
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 27 8.6
AC006712-8|AAU20838.1| 450|Caenorhabditis elegans Hypothetical ... 27 8.6
>AF067616-4|AAC19193.1| 373|Caenorhabditis elegans Hypothetical
protein F29C4.6 protein.
Length = 373
Score = 131 bits (317), Expect = 4e-31
Identities = 55/103 (53%), Positives = 80/103 (77%)
Frame = -1
Query: 623 TRKLVYFSTECVFAPNAYRGHARALLKDMEKIRPSCIMDIIYSGETMSIKEEVSLPTQRL 444
T +L YF TEC++APNAYRG+AR ++D+EK+ P I+D+I SGE +S+K+EV +PT ++
Sbjct: 229 TNQLEYFYTECIYAPNAYRGYARKYVRDLEKVHPRAILDLIRSGEKVSVKKEVEMPTLKI 288
Query: 443 CIRCNFVSSQEVCKACVLLEGLNKGLPKLGIGKSSKVKKLLDE 315
C RC +++SQ++CKAC+L+EGLN G LG+ KS K KK+ E
Sbjct: 289 CERCGYMTSQKLCKACLLIEGLNTGNTDLGVRKSKKSKKVTVE 331
>U80952-3|AAB38093.1| 279|Caenorhabditis elegans Hypothetical
protein F54H5.3 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -1
Query: 344 SSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNK 165
S +VKK +DE NTR + + + V ++ + + ++ +S K+ E +N ++
Sbjct: 200 SVQVKKAIDEKNTRTSEMVSVVNQIKAVEVDLDRQAQLVNELSERVKRGEIQYSNLVMHE 259
Query: 164 TERNVE----KNNE 135
VE KNNE
Sbjct: 260 RSLRVELGRLKNNE 273
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 31.9 bits (69), Expect = 0.40
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = -1
Query: 353 IGKSSKVKKLLDEYNTRQ--NNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATN 180
IGK +K KKLL+E N RQ ++L+ N K +T + ++++
Sbjct: 996 IGKINKEKKLLEE-NNRQLVDDLQAEEAKQAQANRLRGKLEQTLDEMEEAVEREK--RIR 1052
Query: 179 CCTNKTERNVEKNNEKLQTVLDKYS---LENNSQVKLDEED 66
T K++R VE + Q +D+ S LE ++ +K E D
Sbjct: 1053 AETEKSKRKVEGELKGAQETIDELSAIKLETDASLKKKEAD 1093
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 31.9 bits (69), Expect = 0.40
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = -1
Query: 353 IGKSSKVKKLLDEYNTRQ--NNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATN 180
IGK +K KKLL+E N RQ ++L+ N K +T + ++++
Sbjct: 996 IGKINKEKKLLEE-NNRQLVDDLQAEEAKQAQANRLRGKLEQTLDEMEEAVEREK--RIR 1052
Query: 179 CCTNKTERNVEKNNEKLQTVLDKYS---LENNSQVKLDEED 66
T K++R VE + Q +D+ S LE ++ +K E D
Sbjct: 1053 AETEKSKRKVEGELKGAQETIDELSAIKLETDASLKKKEAD 1093
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 31.9 bits (69), Expect = 0.40
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = -1
Query: 353 IGKSSKVKKLLDEYNTRQ--NNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATN 180
IGK +K KKLL+E N RQ ++L+ N K +T + ++++
Sbjct: 996 IGKINKEKKLLEE-NNRQLVDDLQAEEAKQAQANRLRGKLEQTLDEMEEAVEREK--RIR 1052
Query: 179 CCTNKTERNVEKNNEKLQTVLDKYS---LENNSQVKLDEED 66
T K++R VE + Q +D+ S LE ++ +K E D
Sbjct: 1053 AETEKSKRKVEGELKGAQETIDELSAIKLETDASLKKKEAD 1093
>AF039716-4|AAB96739.1| 616|Caenorhabditis elegans Aminopeptidase p
protein 1 protein.
Length = 616
Score = 31.5 bits (68), Expect = 0.53
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -1
Query: 374 KGLPKLGIGKSSKVKKLLDEYNTRQNNLE---TAVKDLEDCNITDKKTSKTCKNISNGFK 204
K L G+ S L+DE+ T + L V D+ED +T TSK +N+ K
Sbjct: 136 KRLKAAGLQPVSIPGNLVDEFWTDRPRLAGEPVVVLDVEDTGLT---TSKKVENLREKLK 192
Query: 203 QKECNA 186
QK+C+A
Sbjct: 193 QKKCDA 198
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 31.1 bits (67), Expect = 0.70
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = -1
Query: 323 LDEYNTRQNNLETAVKDLEDC-NITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVE 147
+DE ++ +LE D+E + T K +T K I K KE N TN ++
Sbjct: 136 IDEVSSAVQHLENEKVDVEKRQSSTGKLIFQTEKEI---MKLKEEIQVN--TNLESNIIQ 190
Query: 146 KNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEI 48
+ EKL +V D + EN + KL+EE ++ +I
Sbjct: 191 LSLEKLSSVKDSSTSENVYKAKLEEEINEARQI 223
>Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical
protein T15H9.5 protein.
Length = 173
Score = 30.7 bits (66), Expect = 0.93
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Frame = -1
Query: 323 LDEYNTRQNNLETAVKDLEDCN--ITDKKTSKTCKNIS-NGFKQKECNATNCCTNKTERN 153
+DE +++ L +A K +E+C ++ +K K +S K K+ K E++
Sbjct: 41 IDESHSKNQKLPSAEKSVEECKKPVSPEKKKSPIKVLSEKKLKSKKKEEDKEPDEKVEKD 100
Query: 152 VEK-----NNEKL---QTVLDKYSLENNSQVKLDEEDSDDSEIKPSR*RR 27
V+K NNE L + K E N + L E D++E K RR
Sbjct: 101 VKKEVKADNNEPLVKNLKIAKKEQEEENPKTDL-ESHKDEAEAKKKESRR 149
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/101 (21%), Positives = 44/101 (43%)
Frame = -1
Query: 368 LPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECN 189
+PK K + + N + + E K +D ++ +++KT K+ G
Sbjct: 215 VPKSYASKLKQTVPPTTKLNNKTTSKEVNKKPKKDTAMSSAESNKT-KDSGKGTSLNNSQ 273
Query: 188 ATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEED 66
+ TE+ + E+L+T L + + +N+S + EED
Sbjct: 274 QSERHEKMTEKKAQMIREELRTNLKQQNHQNSSSDQYSEED 314
>Z73896-6|CAA98055.1| 356|Caenorhabditis elegans Hypothetical
protein F09E8.2a protein.
Length = 356
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = -1
Query: 269 EDC-NITDKKTSKTCKNISNGFKQKE--CNATNCCTNKTERNVEKNNEKLQTVLDKYSLE 99
E C + ++SK C NG+K E C N C N E K +E + + E
Sbjct: 211 EGCLGVCSSESSKGCSKCKNGWKLTEEGCADVNECQN--ESACTKEHEICVNTVGSFKCE 268
Query: 98 NNSQVKLDEEDSDDSEIKPS 39
K D+E + +++ S
Sbjct: 269 CKEGYKKDDEQNCQFDVEAS 288
>Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical
protein R53.3a protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 182 NCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSE 51
N C + +R K+ + ++ L+ S+ + DEED DD E
Sbjct: 65 NICMRQEDRKTFLQTSKIINIGERLLLQRLSEEECDEEDQDDLE 108
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 182 NCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSE 51
N C + +R K+ + ++ L+ S+ + DEED DD E
Sbjct: 65 NICMRQEDRKTFLQTSKIINIGERLLLQRLSEEECDEEDQDDLE 108
>U41533-12|AAA83173.1| 521|Caenorhabditis elegans Hypothetical
protein R05F9.11 protein.
Length = 521
Score = 29.1 bits (62), Expect = 2.8
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = -1
Query: 311 NTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQK--ECNATNCCTNKTERNV---E 147
N NN E+ + + D +T + K N K + N++ + K+ R V E
Sbjct: 361 NEDLNNSESCIHENVDIVLTQSDSLK------NEIKSEIVALNSSTKTSFKSSRRVSFRE 414
Query: 146 KNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKPSR*RRHL 21
K N +L + + +S + DEE+SD+ + S R HL
Sbjct: 415 KENGELDNTIHEIPRRCHSSDESDEENSDEDPVAESSHRPHL 456
>AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical
protein C53D5.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 2.8
Identities = 27/120 (22%), Positives = 48/120 (40%)
Frame = -1
Query: 416 QEVCKACVLLEGLNKGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTS 237
Q KA ++ + L + K+ L N ++ +++ +D + +K
Sbjct: 11 QNFMKATGFIQEFTRRLLERSSKNIIKIPDNLSNVNQLTCLVKQFLREQQDLAVKVEKVQ 70
Query: 236 KTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDD 57
+ KN+S+ K+K N NC RN+ KLQ + L+ +KL S D
Sbjct: 71 ENQKNLSDFVKEKLTNC-NCHVQLDVRNLLAKEMKLQDLRQDDGLD--FSIKLPSTSSTD 127
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 260 NITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTV 120
N+TD+K K + +G K+KE CT+ TE E NE+ Q +
Sbjct: 1474 NVTDEKAVKKHHHHHHGHKKKE-----LCTDVTEDADESRNEEQQLI 1515
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 260 NITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTV 120
N+TD+K K + +G K+KE CT+ TE E NE+ Q +
Sbjct: 1474 NVTDEKAVKKHHHHHHGHKKKE-----LCTDVTEDADESRNEEQQLI 1515
>Z73896-7|CAO82025.1| 310|Caenorhabditis elegans Hypothetical
protein F09E8.2b protein.
Length = 310
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -1
Query: 269 EDC-NITDKKTSKTCKNISNGFKQKE--CNATNCCTNKTERNVEKNNEKLQTVLDKYSLE 99
E C + ++SK C NG+K E C N C N E K +E + + E
Sbjct: 211 EGCLGVCSSESSKGCSKCKNGWKLTEEGCADVNECQN--ESACTKEHEICVNTVGSFKCE 268
Query: 98 NNSQVKLDEEDSDDSEIK 45
K D+E + +++
Sbjct: 269 CKEGYKKDDEQNCQFDVE 286
>U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical
protein ZC196.4 protein.
Length = 468
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = -1
Query: 344 SSKVKKLLDEYNTRQNNLETAVKDLEDC--NITDKKTSKTCKNISNGFKQKECNATNCCT 171
S++ +L E + +++ L DLE N+T + T I + K C +N C
Sbjct: 114 SNEKTELTIEDSAQKSFLSDLFSDLEPVGKNVTKENT------IEDDKKPDFCEYSNICD 167
Query: 170 NKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSE 51
E N +K + + KY + ++ +L E+D + E
Sbjct: 168 EFLE-NYQKMENEHNEMTSKYQILGENKSELKEQDDSEKE 206
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -1
Query: 353 IGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKE-CNATNC 177
+ SK++K D T+Q ET V D + KKT K+ IS + T
Sbjct: 12914 VATDSKLEKAAD--TTKQIETETVVDDKSKKKVLKKKTEKSDSFISQKSETPPVVEPTKP 12971
Query: 176 CTNKTERNVEKNNEKLQTVLDKYSLENNSQV 84
++ ++ E N K Q +D +L+ ++V
Sbjct: 12972 AESEAQKIAEVNKAKKQKEVDD-NLKREAEV 13001
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -1
Query: 353 IGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKE-CNATNC 177
+ SK++K D T+Q ET V D + KKT K+ IS + T
Sbjct: 12914 VATDSKLEKAAD--TTKQIETETVVDDKSKKKVLKKKTEKSDSFISQKSETPPVVEPTKP 12971
Query: 176 CTNKTERNVEKNNEKLQTVLDKYSLENNSQV 84
++ ++ E N K Q +D +L+ ++V
Sbjct: 12972 AESEAQKIAEVNKAKKQKEVDD-NLKREAEV 13001
>Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical
protein R06A4.2 protein.
Length = 837
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/71 (23%), Positives = 27/71 (38%)
Frame = -1
Query: 266 DCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQ 87
D ++ KK + +SN N T T +L SL+N S+
Sbjct: 560 DTSVASKKEAMDVDELSNKMTDAVNNLQKSITESTNETTVLEGAAAAVILLSESLQNFSR 619
Query: 86 VKLDEEDSDDS 54
V +++ SD S
Sbjct: 620 VGMEKSSSDVS 630
>Z81047-6|CAB02833.2| 381|Caenorhabditis elegans Hypothetical
protein C41G6.8 protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = -1
Query: 623 TRKLVYFSTECVFAPNAYRGHARALLKDMEKIRPSC--IMDIIYSGETMSIKEEVSLPTQ 450
T KL+ F T G L+ ++EKI +C + IY+ E++ +
Sbjct: 275 TTKLILFMTITFVLSEGLSGFNALLMYNIEKIEENCPDFVSAIYTAESLIAVLKTFNAFS 334
Query: 449 RLCIRCNFVSSQ--EVCKACVLLEGLNK 372
+ C F+SSQ V K+ ++ + NK
Sbjct: 335 HFFV-CFFLSSQYRNVAKSLIIPKKQNK 361
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 356 GIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNI 255
G GKS+ V+ LL YN N+ DL D NI
Sbjct: 360 GSGKSTVVQLLLHYYNIDSGNIFIDGMDLNDMNI 393
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 356 GIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNI 255
G GKS+ V+ LL YN N+ DL D NI
Sbjct: 419 GSGKSTVVQLLLHYYNIDSGNIFIDGMDLNDMNI 452
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 356 GIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNI 255
G GKS+ V+ LL YN N+ DL D NI
Sbjct: 419 GSGKSTVVQLLLHYYNIDSGNIFIDGMDLNDMNI 452
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 6.5
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Frame = -1
Query: 347 KSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTN 168
K KK D+ Q + + + +D + DKK K K N ++KE +
Sbjct: 146 KKKDKKKEEDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKKKKDDNDEEEKEKDKKKKDKK 205
Query: 167 KTERNVEKNNEKLQTVL----DKYSLENNSQVKLDEEDSDDSEIK 45
K + + E N+K + DK EN K D++ D + K
Sbjct: 206 KDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKEK 250
>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical
protein F54F2.1 protein.
Length = 1226
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = -1
Query: 371 GLPKLGIG--KSSKVKKLLDE---YNTRQNNLETAVKDLED--CNITDKKTSKTCKNISN 213
G+P + +G KS LL + T Q E+A+ +ED C++ K + CK+I+
Sbjct: 454 GMPDIAVGAWKSGNAAVLLTKPVVTVTGQTEPESALISVEDKNCDVDGKLGKQACKHINT 513
Query: 212 GFK 204
FK
Sbjct: 514 CFK 516
>AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical
protein Y54G2A.21 protein.
Length = 967
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = -1
Query: 248 KKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEE 69
K+ K+C + Q+ N+ N + E NN K++T S + N ++ ++
Sbjct: 9 KRKEKSCAGLLLANAQRARNSANGVSKDQTEEEELNNSKVETC--SSSPQANQEISSEDR 66
Query: 68 DSDDSEIKPSR*RRHLAPSSC 6
+S +I S S+C
Sbjct: 67 NSHHPDIASSSSATTCRSSNC 87
>AC024794-2|AAK68498.1| 618|Caenorhabditis elegans Hypothetical
protein Y48G1BM.6 protein.
Length = 618
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = -1
Query: 248 KKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEE 69
K+ K+C + Q+ N+ N + E NN K++T S + N ++ ++
Sbjct: 172 KRKEKSCAGLLLANAQRARNSANGVSKDQTEEEELNNSKVETC--SSSPQANQEISSEDR 229
Query: 68 DSDDSEIKPSR*RRHLAPSSC 6
+S +I S S+C
Sbjct: 230 NSHHPDIASSSSATTCRSSNC 250
>AC006693-7|AAF60385.1| 201|Caenorhabditis elegans Hypothetical
protein W02H5.2 protein.
Length = 201
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -1
Query: 140 NEKLQTVLDKYSLENNSQVKLDEED--SDDSEIKPSR*RRHLAPSSC 6
N+++ +L + E +S+ + E+D + D +KPS R+ +AP +C
Sbjct: 81 NDQIFKLLSQPEPEQSSEEQKFEDDFITQDKPVKPSLIRQKIAPHTC 127
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Frame = -1
Query: 371 GLPKLGI--GKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQK 198
GLP +G GKSS K +N D D + + +KTS T
Sbjct: 178 GLPNVGDDDGKSSSANKT--STTAPDSNGLLIPNDKGDNSSSTEKTSTTTPASDGSLNPD 235
Query: 197 ECNATNCCTNKTERNVEKNNEKL 129
+ N T+ TNKT +E L
Sbjct: 236 DDNGTSSFTNKTSTTTPAADEPL 258
>Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical
protein W04A4.3 protein.
Length = 149
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 260 NITDKKTSKTC-KNISNGFKQKECNATNCCTNKTERNV 150
+I KK + T NG+ + + N CCT K RNV
Sbjct: 79 SIGQKKGNGTAVATCENGWLECQLNKLQCCTKKYSRNV 116
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 91 RKLNLTKKTLMTQKSNHQDEDD 26
RK NLTKK ++T++ DE+D
Sbjct: 19 RKKNLTKKKVVTEEIEKDDEED 40
>U70849-6|ABD63227.1| 284|Caenorhabditis elegans Phosphatidylserine
receptor familyprotein 1, isoform b protein.
Length = 284
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -1
Query: 374 KGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVK-DLEDCNITDKKTSKTCKNISNGFKQK 198
KG PKL VK+L ++ +++A + L D N + +S + + + +
Sbjct: 192 KGRPKLS---KHWVKRLTEQRPELLEIIKSASEIPLYDMNESSSDSSSSSSSSDDSSDES 248
Query: 197 ECNATNCCTNKTERNVEKNNE 135
+C+ + C + +N +++NE
Sbjct: 249 DCDDSGRCGGRKRKNDDRSNE 269
>U70849-5|AAF99922.2| 400|Caenorhabditis elegans Phosphatidylserine
receptor familyprotein 1, isoform a protein.
Length = 400
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -1
Query: 374 KGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVK-DLEDCNITDKKTSKTCKNISNGFKQK 198
KG PKL VK+L ++ +++A + L D N + +S + + + +
Sbjct: 308 KGRPKLS---KHWVKRLTEQRPELLEIIKSASEIPLYDMNESSSDSSSSSSSSDDSSDES 364
Query: 197 ECNATNCCTNKTERNVEKNNE 135
+C+ + C + +N +++NE
Sbjct: 365 DCDDSGRCGGRKRKNDDRSNE 385
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1
Query: 206 KQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDE--EDSDDSEIKPSR 36
K+K +ATN +E +EK + T + S E+ + VK ++ E D+ P++
Sbjct: 1486 KEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKTPEKVDEKPKSPTK 1544
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 203 QKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKPSR*RR 27
+ EC + T+ ++E+N+E+ ++ + L E DSD+S P R RR
Sbjct: 466 EDECTVVDAVNENTDSSIEENDEENTENRPRFDSSIATIHVLHESDSDES-ATPRRERR 523
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 203 QKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKPSR*RR 27
+ EC + T+ ++E+N+E+ ++ + L E DSD+S P R RR
Sbjct: 466 EDECTVVDAVNENTDSSIEENDEENTENRPRFDSSIATIHVLHESDSDES-ATPRRERR 523
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 203 QKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKPSR*RR 27
+ EC + T+ ++E+N+E+ ++ + L E DSD+S P R RR
Sbjct: 466 EDECTVVDAVNENTDSSIEENDEENTENRPRFDSSIATIHVLHESDSDES-ATPRRERR 523
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = -1
Query: 251 DKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDE 72
D+K SK+ K + K+K +++ E + E+ +K + K + +S+ E
Sbjct: 100 DRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSE--SSE 157
Query: 71 EDSDDSEIKPSR 36
E ++ ++K S+
Sbjct: 158 ESEEERKVKKSK 169
>AF078785-4|AAC27089.3| 609|Caenorhabditis elegans Hypothetical
protein C04E12.4 protein.
Length = 609
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 403 KHVFCLKA*IKGYRNLESVKVLK*RNYLTNTTPG 302
K + LK +KG N+ES K+ Y T TTPG
Sbjct: 386 KDISVLKTKLKGVSNVESFKI---EVYWTTTTPG 416
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 203 QKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKPSR*RR 27
+ EC + T+ ++E+N+E+ ++ + L E DSD+S P R RR
Sbjct: 466 EDECTVVDAVNENTDSSIEENDEENTENRPRFDSSIATIHVLHESDSDES-ATPRRERR 523
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1
Query: 206 KQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDE--EDSDDSEIKPSR 36
K+K +ATN +E +EK + T + S E+ + VK ++ E D+ P++
Sbjct: 1486 KEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKTPEKVDEKPKSPTK 1544
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1
Query: 206 KQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDE--EDSDDSEIKPSR 36
K+K +ATN +E +EK + T + S E+ + VK ++ E D+ P++
Sbjct: 1486 KEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKTPEKVDEKPKSPTK 1544
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1
Query: 206 KQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDE--EDSDDSEIKPSR 36
K+K +ATN +E +EK + T + S E+ + VK ++ E D+ P++
Sbjct: 1486 KEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKTPEKVDEKPKSPTK 1544
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = -1
Query: 251 DKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDE 72
D+K SK+ K + K+K +++ E + E+ +K + K + +S+ E
Sbjct: 100 DRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSE--SSE 157
Query: 71 EDSDDSEIKPSR 36
E ++ ++K S+
Sbjct: 158 ESEEERKVKKSK 169
>AC006712-8|AAU20838.1| 450|Caenorhabditis elegans Hypothetical
protein Y119C1B.3 protein.
Length = 450
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -1
Query: 185 TNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKL 78
T C +T N+EKN E +T+ +L++NS+++L
Sbjct: 112 TRICNWRT--NMEKNTEGFETLQHPVALKDNSELRL 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,072,903
Number of Sequences: 27780
Number of extensions: 295277
Number of successful extensions: 1293
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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