Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12b08
(641 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 1.9
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 2.5
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 2.5
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 2.5
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 2.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 2.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.5
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 3.3
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -1
Query: 254 TDKKTSKTCK---NISNGFKQKECNATNCCTNKTERNVEKNNEK 132
T+++TSK K ++SN +K N N N N NN K
Sbjct: 71 TERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYK 114
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -1
Query: 254 TDKKTSKTCK---NISNGFKQKECNATNCCTNKTERNVEKNNEK 132
T+++TSK K ++SN +K N N N N NN K
Sbjct: 71 TERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYK 114
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/53 (20%), Positives = 27/53 (50%)
Frame = -1
Query: 248 KKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNS 90
++ K+ KN N +++ + ++TER K + + ++ + Y+ NN+
Sbjct: 277 EREQKSYKN-ENSYRKYRETSKERSRDRTERERSKERKIISSLSNNYNYNNNN 328
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 2.5
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = -1
Query: 332 KKLLDEYNTRQN---NLETAVKDLEDCNITDKKTSKTCKNISNGFKQ----KECNATNCC 174
+KLL+E +R+ + E K ++ N + +K +T K S K+ KE +
Sbjct: 27 EKLLEERTSRKRYSRSREREKKSYKNEN-SYRKYRETSKERSRDRKERERSKEPKIISSL 85
Query: 173 TNKTERNVEKNNEKLQ 126
+NKT N N +KLQ
Sbjct: 86 SNKTIHNNNNNYKKLQ 101
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 2.5
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = -1
Query: 332 KKLLDEYNTRQN---NLETAVKDLEDCNITDKKTSKTCKNISNGFKQ----KECNATNCC 174
+KLL+E +R+ + E K ++ N + +K +T K S K+ KE +
Sbjct: 27 EKLLEERTSRKRYSRSREREKKSYKNEN-SYRKYRETSKERSRDRKERERSKEPKIISSL 85
Query: 173 TNKTERNVEKNNEKLQ 126
+NKT N N +KLQ
Sbjct: 86 SNKTIHNNNNNYKKLQ 101
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.0 bits (47), Expect = 2.5
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = -1
Query: 332 KKLLDEYNTRQN---NLETAVKDLEDCNITDKKTSKTCKNISNGFKQ----KECNATNCC 174
+KLL+E +R+ + E K ++ N + +K +T K S K+ KE +
Sbjct: 27 EKLLEERTSRKRYSRSREREKKSYKNEN-SYRKYRETSKERSRDRKERERSKEPKIISSL 85
Query: 173 TNKTERNVEKNNEKLQ 126
+NKT N N +KLQ
Sbjct: 86 SNKTIHNNNNNYKKLQ 101
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 2.5
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = -1
Query: 332 KKLLDEYNTRQN---NLETAVKDLEDCNITDKKTSKTCKNISNGFKQ----KECNATNCC 174
+KLL+E +R+ + E K ++ N + +K +T K S K+ KE +
Sbjct: 27 EKLLEERTSRKRYSRSREREKKSYKNEN-SYRKYRETSKERSRDRKERERSKEPKIISSL 85
Query: 173 TNKTERNVEKNNEKLQ 126
+NKT N N +KLQ
Sbjct: 86 SNKTIHNNNNNYKKLQ 101
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.0 bits (47), Expect = 2.5
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = -1
Query: 332 KKLLDEYNTRQN---NLETAVKDLEDCNITDKKTSKTCKNISNGFKQ----KECNATNCC 174
+KLL+E +R+ + E K ++ N + +K +T K S K+ KE +
Sbjct: 260 EKLLEERTSRKRYSRSREREKKSYKNEN-SYRKYRETSKERSRDRKERERSKEPKIISSL 318
Query: 173 TNKTERNVEKNNEKLQ 126
+NKT N N +KLQ
Sbjct: 319 SNKTIHNNNNNYKKLQ 334
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 131 LQTVLDKYSLENNSQVKLDEEDSDDS 54
+QTV K LE N +KLD D +
Sbjct: 65 VQTVRFKNELERNITIKLDTRAEDST 90
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 534 FHILEQGACMSSVSIRCEDTLCREI 608
F +QGAC+S ++I+ C EI
Sbjct: 170 FAFRDQGACISILAIKVYYISCPEI 194
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,592
Number of Sequences: 438
Number of extensions: 3690
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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