Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12b04
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for ... 33 0.90
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 33 0.90
BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1 ... 33 0.90
BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein. 33 0.90
BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein. 33 0.90
BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein. 33 0.90
AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein. 33 0.90
AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2, tr... 33 0.90
AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2, tr... 33 0.90
AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2, tr... 33 0.90
AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2, tr... 33 0.90
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 33 0.90
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 33 0.90
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 31 4.8
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 4.8
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 31 4.8
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 30 8.4
>X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for
octamer-binding protein Oct-1. ).
Length = 743
Score = 33.5 bits (73), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 613 ALAP 624
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 33.5 bits (73), Expect = 0.90
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Frame = -1
Query: 617 SATEVINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAV 444
S T V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 79 STTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-V 137
Query: 443 VVNDPIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLS 279
+ S +T ++ LV++ +E LS
Sbjct: 138 STTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLS 197
Query: 278 TKILADAVPEAVIVTAPEAETAITTGSPT 192
T +A + + T + T +TT SPT
Sbjct: 198 TTPVASSEASTLSTTPVDTSTPVTTSSPT 226
>BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1
protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 613 ALAP 624
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein.
Length = 561
Score = 33.5 bits (73), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 374 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 430
Query: 613 ALAP 624
+L+P
Sbjct: 431 SLSP 434
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 450
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 451 TSTTQTTSTPLSS 463
>BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 613 ALAP 624
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 613 ALAP 624
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein.
Length = 755
Score = 33.5 bits (73), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 478 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 534
Query: 613 ALAP 624
+L+P
Sbjct: 535 SLSP 538
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAA-T 567
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+ T
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 555
Query: 568 IVLEPTDT 591
++ T T
Sbjct: 556 STIQTTST 563
>AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 561
Score = 33.5 bits (73), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 374 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 430
Query: 613 ALAP 624
+L+P
Sbjct: 431 SLSP 434
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 450
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 451 TSTTQTTSTPLSS 463
>AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 741
Score = 33.5 bits (73), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 464 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 520
Query: 613 ALAP 624
+L+P
Sbjct: 521 SLSP 524
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 482 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 540
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 541 TSTTQTTSTPLSS 553
>AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 613 ALAP 624
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 755
Score = 33.5 bits (73), Expect = 0.90
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 478 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 534
Query: 613 ALAP 624
+L+P
Sbjct: 535 SLSP 538
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 554
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 555 TSTTQTTSTPLSS 567
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 33.5 bits (73), Expect = 0.90
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Frame = -1
Query: 617 SATEVINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAV 444
S T V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 3348 STTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-V 3406
Query: 443 VVNDPIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLS 279
+ S +T ++ LV++ +E LS
Sbjct: 3407 STTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLS 3466
Query: 278 TKILADAVPEAVIVTAPEAETAITTGSPT 192
T +A + + T + T +TT SPT
Sbjct: 3467 TTPVASSEASTLSTTPVDTSTPVTTSSPT 3495
Score = 32.7 bits (71), Expect = 1.6
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +1
Query: 376 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 555
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 556 GAATIVLEPTDTSSLITS 609
A+T+ P D++S +T+
Sbjct: 822 EASTLSTTPVDSNSPVTT 839
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +1
Query: 442 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS--VA 615
T++ A+T+ P DTS+ IT+ ++ S TTT G + + P++ S L+TS V+
Sbjct: 760 TSSEASTLSTTPLDTSTHITTST-----EASCSPTTTEGTSMPISTPSEGSPLLTSIPVS 814
Query: 616 LAPV 627
+ PV
Sbjct: 815 ITPV 818
Score = 30.3 bits (65), Expect = 8.4
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +1
Query: 412 PVEDSIGSFTTTAG--AATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPT 585
P+ + + S T A A+T+ P DTS+ +T+ A ++ +S TT G + + P+
Sbjct: 2693 PLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSA-----EASSSPTTAEGTSMRISTPS 2747
Query: 586 DTSSLITSVALA--PVEDS 636
D S+ +TS+ ++ PV S
Sbjct: 2748 DGSTPLTSILVSTLPVASS 2766
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 33.5 bits (73), Expect = 0.90
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Frame = -1
Query: 617 SATEVINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAV 444
S T V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 3348 STTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-V 3406
Query: 443 VVNDPIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLS 279
+ S +T ++ LV++ +E LS
Sbjct: 3407 STTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLS 3466
Query: 278 TKILADAVPEAVIVTAPEAETAITTGSPT 192
T +A + + T + T +TT SPT
Sbjct: 3467 TTPVASSEASTLSTTPVDTSTPVTTSSPT 3495
Score = 32.7 bits (71), Expect = 1.6
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +1
Query: 376 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 555
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 556 GAATIVLEPTDTSSLITS 609
A+T+ P D++S +T+
Sbjct: 822 EASTLSTTPVDSNSPVTT 839
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +1
Query: 442 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS--VA 615
T++ A+T+ P DTS+ IT+ ++ S TTT G + + P++ S L+TS V+
Sbjct: 760 TSSEASTLSTTPLDTSTHITTST-----EASCSPTTTEGTSMPISTPSEGSPLLTSIPVS 814
Query: 616 LAPV 627
+ PV
Sbjct: 815 ITPV 818
Score = 30.3 bits (65), Expect = 8.4
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +1
Query: 412 PVEDSIGSFTTTAG--AATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPT 585
P+ + + S T A A+T+ P DTS+ +T+ A ++ +S TT G + + P+
Sbjct: 2693 PLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSA-----EASSSPTTAEGTSMRISTPS 2747
Query: 586 DTSSLITSVALA--PVEDS 636
D S+ +TS+ ++ PV S
Sbjct: 2748 DGSTPLTSILVSTLPVASS 2766
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 31.1 bits (67), Expect = 4.8
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +1
Query: 373 TNASSLITSVALAPVEDSIGS---FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITS- 540
+ S+ TS AP +I + TT+A A+ PT TSS T+ + S TS
Sbjct: 703 STTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSA 762
Query: 541 -FTTTAGAATIVLEPTDTSSLITS 609
T+T A T T +S I+S
Sbjct: 763 PITSTISAPTTSTTSTPQTSTISS 786
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 412 PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 582
PV + SF+ ++ AT V+ T+ SS + + + +TS T++GAAT P
Sbjct: 11702 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 11761
Query: 583 TDTSS 597
T T S
Sbjct: 11762 TLTHS 11766
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 412 PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 582
PV + SF+ ++ AT V+ T+ SS + + + +TS T++GAAT P
Sbjct: 3406 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 3465
Query: 583 TDTSS 597
T T S
Sbjct: 3466 TLTHS 3470
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +1
Query: 382 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGA 561
+ L T+ S + ++T G I+ EP+ T+++ AP + T+ +T A A
Sbjct: 3038 TELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATV-----TAPPGSTATASSTQATA 3092
Query: 562 ATIVLEPTDTSSLITSVALAP 624
T + T T+ +TS P
Sbjct: 3093 GTPHVSTTATTPTVTSSKATP 3113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,367,846
Number of Sequences: 237096
Number of extensions: 1352490
Number of successful extensions: 3163
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3126
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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