Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12b02
(520 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016043-1|AAV36928.1| 415|Drosophila melanogaster LP20058p pro... 33 0.31
AE014134-3544|AAF57235.1| 631|Drosophila melanogaster CG11630-P... 33 0.31
BT030122-1|ABN49261.1| 540|Drosophila melanogaster IP13510p pro... 29 3.8
AE014134-2225|AAF53207.2| 634|Drosophila melanogaster CG15485-P... 29 3.8
BT029107-1|ABJ17040.1| 314|Drosophila melanogaster IP14803p pro... 28 8.7
AY089234-1|AAL89972.1| 355|Drosophila melanogaster AT02512p pro... 28 8.7
AY058532-1|AAL13761.1| 294|Drosophila melanogaster LD23816p pro... 28 8.7
AL009192-1|CAA15687.1| 326|Drosophila melanogaster EG:133E12.3 ... 28 8.7
AE014298-307|AAF45703.2| 355|Drosophila melanogaster CG4406-PA ... 28 8.7
AE014134-3118|AAF53815.3| 1356|Drosophila melanogaster CG10186-P... 28 8.7
AE014134-3117|AAN11047.1| 1676|Drosophila melanogaster CG10186-P... 28 8.7
AE014134-367|AAN10452.2| 294|Drosophila melanogaster CG7085-PE,... 28 8.7
AE014134-366|AAX53593.1| 294|Drosophila melanogaster CG7085-PD,... 28 8.7
AE014134-365|AAF51284.1| 294|Drosophila melanogaster CG7085-PA,... 28 8.7
>BT016043-1|AAV36928.1| 415|Drosophila melanogaster LP20058p
protein.
Length = 415
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 280 FGVNSVDSFRAQWYLQPAKYDKDNLFYIYNREYSKALTLSRTLE 149
FGV +++SF+ +Y D DN Y+Y+RE+ + T+E
Sbjct: 103 FGVETLESFKCMYYAMERHTDFDNR-YLYSREFELLTDGNNTIE 145
>AE014134-3544|AAF57235.1| 631|Drosophila melanogaster CG11630-PA
protein.
Length = 631
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 280 FGVNSVDSFRAQWYLQPAKYDKDNLFYIYNREYSKALTLSRTLE 149
FGV +++SF+ +Y D DN Y+Y+RE+ + T+E
Sbjct: 103 FGVETLESFKCMYYAMERHTDFDNR-YLYSREFELLTDGNNTIE 145
>BT030122-1|ABN49261.1| 540|Drosophila melanogaster IP13510p
protein.
Length = 540
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -1
Query: 406 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGTN---PNGDHMAFGVNS 266
K +W A N K ++ L ++ N+++++GV TN +GD++A V +
Sbjct: 395 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNVGT 444
>AE014134-2225|AAF53207.2| 634|Drosophila melanogaster CG15485-PA
protein.
Length = 634
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -1
Query: 406 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGTN---PNGDHMAFGVNS 266
K +W A N K ++ L ++ N+++++GV TN +GD++A V +
Sbjct: 489 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNVGT 538
>BT029107-1|ABJ17040.1| 314|Drosophila melanogaster IP14803p
protein.
Length = 314
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 118 CIPRPCGYPRFQAS*TVSKPCCIHGCRCRTNC 213
C PR CG P A + C +GC+ NC
Sbjct: 240 CEPRSCGQPPDPAYGWHAGECYTYGCKITYNC 271
>AY089234-1|AAL89972.1| 355|Drosophila melanogaster AT02512p
protein.
Length = 355
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -1
Query: 460 HGNDGRLAFGDGKDKTSPKVSWKFIALWEN---NKVYFKI 350
HG DG L F D ++ TS +++ +WE N+++F +
Sbjct: 165 HGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNELFFMV 204
>AY058532-1|AAL13761.1| 294|Drosophila melanogaster LD23816p
protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -1
Query: 370 NKVYFKILNTERNQYLVLGVGTNPNGDHMAFG--VNSV-DSFRAQWYLQPAKYDKDNLFY 200
N V +L TE+ +L+ + T+P D++ V + DS ++W P + DK L
Sbjct: 176 NLVEKGVLTTEKQNFLLFDMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLAL 235
Query: 199 IY 194
I+
Sbjct: 236 IF 237
>AL009192-1|CAA15687.1| 326|Drosophila melanogaster EG:133E12.3
protein.
Length = 326
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -1
Query: 460 HGNDGRLAFGDGKDKTSPKVSWKFIALWEN---NKVYFKI 350
HG DG L F D ++ TS +++ +WE N+++F +
Sbjct: 165 HGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNELFFMV 204
>AE014298-307|AAF45703.2| 355|Drosophila melanogaster CG4406-PA
protein.
Length = 355
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -1
Query: 460 HGNDGRLAFGDGKDKTSPKVSWKFIALWEN---NKVYFKI 350
HG DG L F D ++ TS +++ +WE N+++F +
Sbjct: 165 HGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNELFFMV 204
>AE014134-3118|AAF53815.3| 1356|Drosophila melanogaster CG10186-PC,
isoform C protein.
Length = 1356
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 118 CIPRPCGYPRFQAS*TVSKPCCIHGCRCRTNC 213
C PR CG P A + C +GC+ NC
Sbjct: 240 CEPRSCGQPPDPAYGWHAGECYTYGCKITYNC 271
>AE014134-3117|AAN11047.1| 1676|Drosophila melanogaster CG10186-PA,
isoform A protein.
Length = 1676
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 118 CIPRPCGYPRFQAS*TVSKPCCIHGCRCRTNC 213
C PR CG P A + C +GC+ NC
Sbjct: 240 CEPRSCGQPPDPAYGWHAGECYTYGCKITYNC 271
>AE014134-367|AAN10452.2| 294|Drosophila melanogaster CG7085-PE,
isoform E protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -1
Query: 370 NKVYFKILNTERNQYLVLGVGTNPNGDHMAFG--VNSV-DSFRAQWYLQPAKYDKDNLFY 200
N V +L TE+ +L+ + T+P D++ V + DS ++W P + DK L
Sbjct: 176 NLVEKGVLTTEKQNFLLFDMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLAL 235
Query: 199 IY 194
I+
Sbjct: 236 IF 237
>AE014134-366|AAX53593.1| 294|Drosophila melanogaster CG7085-PD,
isoform D protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -1
Query: 370 NKVYFKILNTERNQYLVLGVGTNPNGDHMAFG--VNSV-DSFRAQWYLQPAKYDKDNLFY 200
N V +L TE+ +L+ + T+P D++ V + DS ++W P + DK L
Sbjct: 176 NLVEKGVLTTEKQNFLLFDMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLAL 235
Query: 199 IY 194
I+
Sbjct: 236 IF 237
>AE014134-365|AAF51284.1| 294|Drosophila melanogaster CG7085-PA,
isoform A protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -1
Query: 370 NKVYFKILNTERNQYLVLGVGTNPNGDHMAFG--VNSV-DSFRAQWYLQPAKYDKDNLFY 200
N V +L TE+ +L+ + T+P D++ V + DS ++W P + DK L
Sbjct: 176 NLVEKGVLTTEKQNFLLFDMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLAL 235
Query: 199 IY 194
I+
Sbjct: 236 IF 237
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,568,178
Number of Sequences: 53049
Number of extensions: 442849
Number of successful extensions: 1053
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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