Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12a21
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 36 0.025
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 36 0.025
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 33 0.13
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 33 0.13
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 33 0.17
Z92829-4|CAD54131.1| 569|Caenorhabditis elegans Hypothetical pr... 31 0.53
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 31 0.53
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 31 0.93
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 31 0.93
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 30 1.2
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 30 1.6
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical pr... 29 2.1
U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of... 29 2.1
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 2.1
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 2.1
L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. 29 2.1
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 29 2.8
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 29 2.8
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 29 2.8
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF005372-1|AAB81030.1| 225|Caenorhabditis elegans histone H1.5 ... 29 3.7
AF003145-1|AAB57720.1| 225|Caenorhabditis elegans Histone h1 li... 29 3.7
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 3.7
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 3.7
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 28 4.9
X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic int... 28 4.9
U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical pr... 28 4.9
U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate fi... 28 4.9
U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate fi... 28 4.9
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 28 4.9
AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical ... 28 4.9
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical pr... 28 6.5
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL110498-2|CAB54468.1| 254|Caenorhabditis elegans Hypothetical ... 28 6.5
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 6.5
AF068709-8|AAO26015.1| 315|Caenorhabditis elegans Serpentine re... 28 6.5
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 8.6
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 8.6
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 27 8.6
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 27 8.6
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 27 8.6
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 27 8.6
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 27 8.6
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 27 8.6
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 8.6
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 27 8.6
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 35.9 bits (79), Expect = 0.025
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = -1
Query: 372 SPTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYF--TTETSVTQGHTTAKMAAAV 199
+PT A ++ TTT P + TTKP TT TT T+ T TTAK +
Sbjct: 240 TPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKST 299
Query: 198 AKPPENHVVTPDATSVEAKP 139
+ T T+ P
Sbjct: 300 TTTTKTTKTTSTPTTTTTTP 319
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/81 (29%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
PT ++ TTTT TT TT TT T T TT K P
Sbjct: 217 PTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTP 276
Query: 189 --PENHVVTPDATSVEAKPDK 133
TP T+ AK K
Sbjct: 277 TTTPTTTTTPTTTTTTAKTTK 297
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/73 (26%), Positives = 25/73 (34%)
Frame = -1
Query: 372 SPTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
+PT + ++ TTTT P T TT T T+ T TT
Sbjct: 142 TPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTT 201
Query: 192 PPENHVVTPDATS 154
P TP T+
Sbjct: 202 TPTTTTTTPTTTT 214
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 35.9 bits (79), Expect = 0.025
Identities = 25/84 (29%), Positives = 34/84 (40%)
Frame = -1
Query: 342 SSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVVTPD 163
SS TTT V +++ TT+ ++ + T TTE S TQ TT K
Sbjct: 784 SSETTTVVAENIDEVTTTEKEKVVQTTPITTEKSTTQEETTT-TTTTTEKTTSKTTTEKP 842
Query: 162 ATSVEAKPDKIKAHRSIQEKETPD 91
TS A + + S E T D
Sbjct: 843 TTSESATTETTTSEPSTTESTTVD 866
Score = 31.1 bits (67), Expect = 0.70
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Frame = -1
Query: 342 SSYTTTTVKPELNKELTTKPDQKLTTKYFTT-------ETSVTQGHTTAKMAAAVAKPP- 187
S + +TT P +E TT Q T K TT E+S T+ TT + A PP
Sbjct: 511 SEHESTTEVPTTTEEPTTTTGQHKTEKAITTEEPTTTEESSTTEEVTTTEEPANTGNPPT 570
Query: 186 -ENHVVTPDATS 154
EN T TS
Sbjct: 571 TENPTTTEQPTS 582
Score = 29.1 bits (62), Expect = 2.8
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -1
Query: 330 TTTVKPELNKELTTKPDQKLTTKYFTTETSV-TQGHTTAKMAAAVAKPPENHVVTPDATS 154
TTT +P E TT T FTTE +V T+ TTA+ + A KP T ++ S
Sbjct: 575 TTTEQPTSTAESTT------TALPFTTEQTVTTEEPTTAEKSTATQKP----TTTQESVS 624
Query: 153 VEAKPDKIKAHRSIQEKETPD 91
E K K + +E T D
Sbjct: 625 TE-KTSTTKKASTTEEPTTTD 644
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/77 (28%), Positives = 28/77 (36%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
PTA KAP T P N+ K QK +T TT ++ Q TT
Sbjct: 165 PTATSRKAPWYIKDRTAWPTYNRISAEKALQKTSTTQETTTSTTAQPTTTTTATTTTTTT 224
Query: 189 PENHVVTPDATSVEAKP 139
P T T+ +P
Sbjct: 225 PLPTTTTTQPTTTTTEP 241
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/77 (28%), Positives = 28/77 (36%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
PTA KAP T P N+ K QK +T TT ++ Q TT
Sbjct: 161 PTATSRKAPWYIKDRTAWPTYNRISAEKALQKTSTTQETTTSTTAQPTTTTTATTTTTTT 220
Query: 189 PENHVVTPDATSVEAKP 139
P T T+ +P
Sbjct: 221 PLPTTTTTQPTTTTTEP 237
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/77 (28%), Positives = 28/77 (36%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
PTA KAP T P N+ K QK +T TT ++ Q TT
Sbjct: 104 PTATSRKAPWYIKDRTAWPTYNRISAEKALQKTSTTQETTTSTTAQPTTTTTATTTTTTT 163
Query: 189 PENHVVTPDATSVEAKP 139
P T T+ +P
Sbjct: 164 PLPTTTTTQPTTTTTEP 180
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -1
Query: 342 SSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVVTPD 163
S+ TT PE+ L++ PD + + T TS T TT + + + P T +
Sbjct: 358 STSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTT--FTTTMLTSTTTEEPSTSTTTTE 415
Query: 162 ATSVEA 145
TS +
Sbjct: 416 VTSTSS 421
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 366 TAADIKAPSSYTTTT-VKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
T+ + PS+ TTTT V + TT+P LTT T TS T+ T+ + P
Sbjct: 400 TSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTS--TASTSTTEPSTSTVTTSPSTSP 457
Query: 189 PENHVVTPDATS 154
+ V + ++S
Sbjct: 458 VTSTVTSSSSSS 469
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -1
Query: 342 SSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVVTPD 163
S+ TT PE+ L++ PD + + T TS T TT + + + P T +
Sbjct: 358 STSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTT--FTTTMLTSTTTEEPSTSTTTTE 415
Query: 162 ATSVEA 145
TS +
Sbjct: 416 VTSTSS 421
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 366 TAADIKAPSSYTTTT-VKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
T+ + PS+ TTTT V + TT+P LTT T TS T+ T+ + P
Sbjct: 400 TSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTS--TASTSTTEPSTSTVTTSPSTSP 457
Query: 189 PENHVVTPDATS 154
+ V + ++S
Sbjct: 458 VTSTVTSSSSSS 469
>Z92829-4|CAD54131.1| 569|Caenorhabditis elegans Hypothetical
protein F10A3.4 protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = -1
Query: 345 PSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVVTP 166
P++ TT T P LTT+P + FTT+ TQ TT + + P+N T
Sbjct: 476 PTTTTTQTPLPTTTI-LTTRPALTTQSTVFTTQAVTTQQQTTV-VKTPTTQTPQNQTTTG 533
Query: 165 DATSVEAKP 139
+ P
Sbjct: 534 SPSQAPTTP 542
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 31.5 bits (68), Expect = 0.53
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = -1
Query: 357 DIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENH 178
D + +++TTTT KP TT TT TTE T TT+ +A
Sbjct: 140 DTETTTTFTTTTEKPTTIPSTTTSSTTTTTTTT-TTEEPTT---TTSPIATTTTSTSTTT 195
Query: 177 VVTPDATSVEAKPDKIKAHRSIQEKETP-DYLKS 79
TP T+ EA + A + + P DY+ S
Sbjct: 196 TETP--TTSEATTHEPTASTELPPPDAPNDYIDS 227
Score = 29.9 bits (64), Expect = 1.6
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTT---KYFTTETSVTQGHTTAKMAAAV 199
PT SS TTTT + TT TT TTET T TT + A+
Sbjct: 154 PTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTSTSTTTTETPTTSEATTHEPTAST 213
Query: 198 AKPPENHVVTPDATSVEAKPDKIKAHRSIQEK-ETPDYL 85
PP PDA + ++ + + QE ET D L
Sbjct: 214 ELPP------PDAPNDYIDSEEAQNISASQESGETTDVL 246
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -1
Query: 363 AADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKM 211
A + AP + TTTT +TT Q+ TT Y TT T+ T TT M
Sbjct: 302 AETVPAPKTTTTTTTTVPSTTTITTTTTQR-TTPY-TTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -1
Query: 363 AADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKM 211
A + AP + TTTT +TT Q+ TT Y TT T+ T TT M
Sbjct: 302 AETVPAPKTTTTTTTTVPSTTTITTTTTQR-TTPY-TTTTTTTAAPTTTTM 350
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 31.1 bits (67), Expect = 0.70
Identities = 23/73 (31%), Positives = 28/73 (38%)
Frame = -1
Query: 372 SPTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
SPTA + TTTT +E+TT + TT TT TS T TT
Sbjct: 27 SPTADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTT-TSTTSTTTTTTPTTTTTT 85
Query: 192 PPENHVVTPDATS 154
P T T+
Sbjct: 86 TPTTTTSTTSTTT 98
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -1
Query: 255 TTETSVTQGHTTAKMAAAVAKPPENHVVTPDATSVEAKPDKIKAHRSIQEKETPDYL 85
TTE + + KM +AKPP + +PDA A D + E+E D L
Sbjct: 275 TTEKHQNEVEKSKKMLNFLAKPPTVEITSPDAPHQGAFHDNTPKEPKVVEEEEDDDL 331
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPP 187
TA + ++ TT E TT ++ TT+ TTE S T+ TT + PP
Sbjct: 179 TAEIVLVTTTEEITTTTSETTTSATTT--EETTTEPSTTEPSTTEEFTTEETTTVSTNPP 236
Query: 186 ENHVVTPDAT 157
++ D T
Sbjct: 237 TTPELSDDPT 246
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTE--TSVTQG---HTTAKMAA 205
P+ P S + +VKP N + + YF E SVTQ ++ A
Sbjct: 1569 PSYLSSNLPQSSSVASVKPPSNSSSVGQNIEVTVPSYFPVEQSKSVTQAPIPPASSPSAP 1628
Query: 204 AVAKPPENHVVTPDATSVEAKPD-KIKAHRSIQEKETPDYLKSGAN 70
++ P V P ++SV + P ++ ++ E P + +N
Sbjct: 1629 SIPSIPSTLPVAPSSSSVPSSPSAPSESTSTVSETPAPVNVNPASN 1674
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/98 (25%), Positives = 43/98 (43%)
Frame = -1
Query: 372 SPTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
+PT+ + P++ TTT +E+TT + TT + T+ TQ TT
Sbjct: 313 TPTSTTTEIPTT-TTTEEATTTTEEITTTTTKAPTTTTTQSTTTTTQLPTT---TTTTEP 368
Query: 192 PPENHVVTPDATSVEAKPDKIKAHRSIQEKETPDYLKS 79
V P A + E + I+ +S+ ++E D K+
Sbjct: 369 TTTTTTVDPLAENEELEKQAIEVMKSLDDEERIDAEKN 406
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1
Query: 345 PSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHT 223
P+ TTTT PE+ +E + ++ TT+ + T T T G+T
Sbjct: 465 PTPTTTTTQVPEIEEEEVVEEEETTTTRRWPTTT--TSGYT 503
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 29.9 bits (64), Expect = 1.6
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTT---KYFTTETSVTQGHTTAKMAAAV 199
PT SS TTTT + TT TT TTET T TT + A+
Sbjct: 104 PTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTSTSTTTTETPTTSEATTHEPTAST 163
Query: 198 AKPPENHVVTPDATSVEAKPDKIKAHRSIQEK-ETPDYL 85
PP PDA + ++ + + QE ET D L
Sbjct: 164 ELPP------PDAPNDYIDSEEAQNISASQESGETTDVL 196
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -1
Query: 333 TTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMA 208
TTTT P TT TT+ TTET+ T TT A
Sbjct: 277 TTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTA 318
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = -1
Query: 372 SPTAADIKAPSSYTTTTVKPELNK-ELTTKPDQKLTTKYFTTE--TSVTQGHTTAKMAAA 202
+PT ++ TTTT P E TT TT TT T+ T TT
Sbjct: 275 TPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTT 334
Query: 201 VAKPPENHVVTPDATSVEAKP 139
+ + TP T+ KP
Sbjct: 335 ITTTTQT--TTPTTTATTTKP 353
>Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical
protein F08G5.7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = -1
Query: 363 AADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPP 187
AA IK ++ T T TTK TT FTT T T T + A P
Sbjct: 218 AATIKTSTTTVTPTTVTTTKAPTTTKTSTSTTTPKFTTTTIQTTKKITTSPTSTTASIP 276
>U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of
certain neuronsprotein 1 protein.
Length = 778
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -1
Query: 270 TTKYFTTETSVTQGHTTAKMAAAVAKPPENHVVTPDATSVEAKPDKIKA 124
TT TT T+ TT+ PP P+ ++ + P+ IKA
Sbjct: 345 TTSTTTTTTTTPPPTTTSTTTTTTTTPPPTTTARPNQRAIVSNPETIKA 393
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/80 (26%), Positives = 27/80 (33%), Gaps = 1/80 (1%)
Frame = -1
Query: 366 TAADIKAPSSY-TTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
T P+S TTTT P+ +T TT TT T+ Q TT V
Sbjct: 601 TTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLT 660
Query: 189 PENHVVTPDATSVEAKPDKI 130
+ P T P +
Sbjct: 661 TQTWTAPPTTTVKRTTPQTV 680
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/80 (26%), Positives = 27/80 (33%), Gaps = 1/80 (1%)
Frame = -1
Query: 366 TAADIKAPSSY-TTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
T P+S TTTT P+ +T TT TT T+ Q TT V
Sbjct: 601 TTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLT 660
Query: 189 PENHVVTPDATSVEAKPDKI 130
+ P T P +
Sbjct: 661 TQTWTAPPTTTVKRTTPQTV 680
>L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein.
Length = 778
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -1
Query: 270 TTKYFTTETSVTQGHTTAKMAAAVAKPPENHVVTPDATSVEAKPDKIKA 124
TT TT T+ TT+ PP P+ ++ + P+ IKA
Sbjct: 345 TTSTTTTTTTTPPPTTTSTTTTTTTTPPPTTTARPNQRAIVSNPETIKA 393
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -1
Query: 372 SPTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
S T+ PS TTTT+ ++ TT P T TT T T TTA+ +
Sbjct: 144 SSTSQSTTTPS--TTTTII--VSSTTTTNPTTSTTPTTPTTTTPTTSTTTTARGTTDIPA 199
Query: 192 PP 187
PP
Sbjct: 200 PP 201
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
P + ++ TTTT L TT+ +++ TT+ TTE T G + A +
Sbjct: 455 PVCCSNEITTTTTTTTTTTTLAPTTTTEEEKEETTE--TTEKVTTVGKSKKTKATTTTEE 512
Query: 189 PEN 181
PE+
Sbjct: 513 PED 515
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
P + ++ TTTT L TT+ +++ TT+ TTE T G + A +
Sbjct: 455 PVCCSNEITTTTTTTTTTTTLAPTTTTEEEKEETTE--TTEKVTTVGKSKKTKATTTTEE 512
Query: 189 PEN 181
PE+
Sbjct: 513 PED 515
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = -1
Query: 333 TTTTVKPELNKEL----TTKPDQKLTTKYFTTETSVT 235
TTTT++P+ K+ T+K D K TT+ + T T T
Sbjct: 338 TTTTIRPKTTKKYLSRSTSKYDAKKTTRSYQTTTRTT 374
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = -1
Query: 333 TTTTVKPELNKEL----TTKPDQKLTTKYFTTETSVT 235
TTTT++P+ K+ T+K D K TT+ + T T T
Sbjct: 338 TTTTIRPKTTKKYLSRSTSKYDAKKTTRSYQTTTRTT 374
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTT-KPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
T K ++ TTTT KP TT K +TT T+ T TT + P
Sbjct: 385 TTTSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTSPSTTTSTTTSTTIP 444
Query: 189 PENHVVTP 166
P P
Sbjct: 445 PSTTTRKP 452
>AF005372-1|AAB81030.1| 225|Caenorhabditis elegans histone H1.5
protein.
Length = 225
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = -1
Query: 351 KAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVV 172
K + T VK + + KP K TK T T K AAA P+ V
Sbjct: 146 KTVAKKTGDKVKKVKSPKRIAKPAVKKVTKKAAAPTKSAANETAPKKAAATEAAPKKAAV 205
Query: 171 TPDAT 157
T AT
Sbjct: 206 TKAAT 210
>AF003145-1|AAB57720.1| 225|Caenorhabditis elegans Histone h1 like
protein 5 protein.
Length = 225
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = -1
Query: 351 KAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVV 172
K + T VK + + KP K TK T T K AAA P+ V
Sbjct: 146 KTVAKKTGDKVKKVKSPKRIAKPAVKKVTKKAAAPTKSAANETAPKKAAATEAAPKKAAV 205
Query: 171 TPDAT 157
T AT
Sbjct: 206 TKAAT 210
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/82 (25%), Positives = 29/82 (35%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
PT TT+ KP+ +E T P Q TT T+ T A + P
Sbjct: 220 PTTTTPTTTLKPTTSPQKPDSTEE-ATSPSQSTTTP-VATQNPTTSNQKNETTDEATSSP 277
Query: 189 PENHVVTPDATSVEAKPDKIKA 124
+ T+ KPD +A
Sbjct: 278 QSAKTPVTNPTTSPQKPDTTEA 299
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Frame = -1
Query: 372 SPTAADIKAPSS-----YTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMA 208
+P + PSS TTTT PE + T+P TT T T+ + +T +
Sbjct: 333 APETTSTEPPSSSTTPVQTTTTTAPETTR---TEPPSSSTTPVQNTTTTAPETTSTEPPS 389
Query: 207 AAVAKPPENHVVTPDATSVE 148
++ P+ TS E
Sbjct: 390 SSTTPVQTTTTTAPETTSTE 409
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAV 199
T I+A ++ TT + P K TT + TT+ TT+ T T A V
Sbjct: 281 TETTIEAQTTTTTERMSPSTTKTSTTTTAKPTTTRSTTTQRPQTVATTEAPTTTTV 336
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPEL--NKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
T + + TTTT P ++E+TT ++TT+ TT VT TT +
Sbjct: 237 TTTESPTTEASTTTTEAPTTTTSEEVTTT---EITTEAPTTTEEVTTTETTIEAQTTTTT 293
Query: 192 PPENHVVTPDATSVEAKP 139
+ T +T+ AKP
Sbjct: 294 ERMSPSTTKTSTTTTAKP 311
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 333 TTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTA 217
TTTT KP + TT+ Q + T T T+V T A
Sbjct: 305 TTTTAKPTTTRSTTTQRPQTVATTEAPTTTTVEDVTTRA 343
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/88 (22%), Positives = 30/88 (34%)
Frame = -1
Query: 357 DIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENH 178
++K Y T+T+ + TT + TTET HTT P
Sbjct: 108 EVKRVEFYVTSTLNYGAPVDTTTIRNV-YPLPVTTTETQAPPHHTTKPYQYHYTSPTTTT 166
Query: 177 VVTPDATSVEAKPDKIKAHRSIQEKETP 94
P T+ P + H ++ E P
Sbjct: 167 TKRPPTTTTTEDPQPFEFHELQEQAENP 194
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = -1
Query: 351 KAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVV 172
KA TT T+ + TKP + TTK TT S T+ TT K + P V
Sbjct: 304 KATLKTTTKTLPVIPPRPNVTKPITRSTTKR-TTTRSTTKRLTTTKATTVLTTTPVK--V 360
Query: 171 TPDATSV 151
TP T++
Sbjct: 361 TPATTTL 367
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 6/65 (9%)
Frame = -1
Query: 363 AADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFT------TETSVTQGHTTAKMAAA 202
A I + TTT++P TT P +TT T T T+ T TT +
Sbjct: 9 APSIPSRDPVITTTIRPNSTTTTTTSPAPNITTTTTTTTIAPPTNTTTTILTTTTTVTTT 68
Query: 201 VAKPP 187
PP
Sbjct: 69 TTSPP 73
>X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic
intermediate filamentprotein protein.
Length = 543
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -1
Query: 321 VKPELNKEL-TTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVVTPDATSVEA 145
+K E +K + TT+ D L T F ++ S + +K AAV + E + T++ A
Sbjct: 249 IKAEYDKIIQTTRVD--LET-IFQSKISAVESSIVSKNEAAVFRQEEIRKMNESITTLRA 305
Query: 144 KPDKIKAHRSIQEKE 100
K +++A S E+E
Sbjct: 306 KLSELEARNSALERE 320
>U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical
protein C05E11.7 protein.
Length = 463
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
PT + PS+ T TV+P+++ L K + K + Q H + A
Sbjct: 191 PTYPVVCTPSNETIATVRPKIS-NLKEKKIKTQYRKPIQKSKTEIQEHPMVLTSPATPST 249
Query: 189 PEN-HVVTPDATSVEAKPDK 133
+N ++ P+ T+V +P +
Sbjct: 250 ADNIYIALPEQTNVYLRPQR 269
>U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate
filament, b protein2, isoform c protein.
Length = 526
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -1
Query: 321 VKPELNKEL-TTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVVTPDATSVEA 145
+K E +K + TT+ D L T F ++ S + +K AAV + E + T++ A
Sbjct: 249 IKAEYDKIIQTTRVD--LET-IFQSKISAVESSIVSKNEAAVFRQEEIRKMNESITTLRA 305
Query: 144 KPDKIKAHRSIQEKE 100
K +++A S E+E
Sbjct: 306 KLSELEARNSALERE 320
>U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate
filament, b protein2, isoform a protein.
Length = 543
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -1
Query: 321 VKPELNKEL-TTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVVTPDATSVEA 145
+K E +K + TT+ D L T F ++ S + +K AAV + E + T++ A
Sbjct: 249 IKAEYDKIIQTTRVD--LET-IFQSKISAVESSIVSKNEAAVFRQEEIRKMNESITTLRA 305
Query: 144 KPDKIKAHRSIQEKE 100
K +++A S E+E
Sbjct: 306 KLSELEARNSALERE 320
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = -1
Query: 282 DQKLTTKYFTTETSVTQGHTTAKMAAAVA----KPPENHVVTPDATSVEAKPDKIKAHRS 115
D+K+T + ET+VT TT++ + A KP E T +A S KP + A +
Sbjct: 739 DEKVTVET-KQETAVTPAPTTSEKTSTTAAPSTKPAEETTTTTEAPSTTTKPVTV-AVKK 796
Query: 114 IQEKETPDYLK 82
+ +E +K
Sbjct: 797 VSPEEMEKLVK 807
>AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical
protein Y54G2A.38 protein.
Length = 520
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 103 FLLDTAMSFNFIRFSFN*GSVWSNNVIFRGLCYSCSHFCS 222
F+ + A+ I+ + S +SN +IF G C CS C+
Sbjct: 160 FVFNEALDMYSIKSDSDILSAYSNVIIFMGFCVICSIVCN 199
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/89 (23%), Positives = 35/89 (39%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
PT + ++ + T KPE EL + + LT TET G +A A
Sbjct: 589 PTTTEAAVETTEASETPKPEAKPELLSNLEDVLTLTTPETETIEGSGEREEPTTSAPAAE 648
Query: 189 PENHVVTPDATSVEAKPDKIKAHRSIQEK 103
+ + ++S A + +K R E+
Sbjct: 649 ATSEITLLKSSSDVAVIENVKRIRPRTEQ 677
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/89 (23%), Positives = 35/89 (39%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
PT + ++ + T KPE EL + + LT TET G +A A
Sbjct: 589 PTTTEAAVETTEASETPKPEAKPELLSNLEDVLTLTTPETETIEGSGEREEPTTSAPAAE 648
Query: 189 PENHVVTPDATSVEAKPDKIKAHRSIQEK 103
+ + ++S A + +K R E+
Sbjct: 649 ATSEITLLKSSSDVAVIENVKRIRPRTEQ 677
>Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical
protein F35E8.7 protein.
Length = 288
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -1
Query: 369 PTAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKP 190
PTA A + TTTV P + TT +TT T T+V T AA +
Sbjct: 194 PTATTSTAAPAAPTTTVAPAV--VTTTAAPAAVTTTAAVTTTTVAAAAATTTAAACTSYI 251
Query: 189 PE 184
P+
Sbjct: 252 PD 253
>Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical
protein T20D3.8 protein.
Length = 282
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 382 CSSNFTFCFRTFSAIQ*ISDVNVKEFSVKLSIIVIFVFGILELGLFV 522
C S+ FCF + +I ISD ++ E S+ +++ IF+ I L L +
Sbjct: 215 CLSSTIFCFLSLFSIYCISDFSL-ELSICFALLHIFILFICPLILIL 260
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/92 (20%), Positives = 38/92 (41%)
Frame = -1
Query: 345 PSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAKPPENHVVTP 166
P TTT K ++ + DQ T+ + TT + T+G T+ + + +P
Sbjct: 134 PRISTTTDTKDTTTEDPVSSTDQSSTSPHETTRDTTTEGTTSEDSTSTYGSTERSS--SP 191
Query: 165 DATSVEAKPDKIKAHRSIQEKETPDYLKSGAN 70
TS + + S + ET +++ ++
Sbjct: 192 KPTSEFSTSTESDFTESTRSSETTSSIETNSS 223
>AL110498-2|CAB54468.1| 254|Caenorhabditis elegans Hypothetical
protein Y64G10A.3 protein.
Length = 254
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 127 SSSQYPRERDPRLFEIRCEHKFRLCNAFNCNIVFNSLN 14
S + PRE L +RC H RLC A+ I S++
Sbjct: 164 SEEELPRETRTELARLRCGHS-RLCGAYVAKIENRSIS 200
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 354 IKAP-SSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQG 229
+K P +S T V P+LN+ L P+ +TT+ ET+ G
Sbjct: 862 VKNPENSKILTPVLPDLNENLAESPEVLVTTRPENAETAENSG 904
>AF068709-8|AAO26015.1| 315|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 59 protein.
Length = 315
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 9 ITFSELNTILQLKALHSLNLCSHRISNNLGSLSLGYC 119
+T +L K L ++NL + RIS L L+L YC
Sbjct: 201 LTIGIATVVLVTKKLKAVNLPTDRISKKLTRLALVYC 237
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
T+A + TTT+ E + E TT P + TT ++VT+G AV +
Sbjct: 2054 TSAVTEGSGEETTTSAVTEASSEATTTPAGTEASGEETTTSAVTEGSGEETTVVAVVE 2111
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
T+A + TTT+ E + E TT P + TT ++VT+G AV +
Sbjct: 2054 TSAVTEGSGEETTTSAVTEASSEATTTPAGTEASGEETTTSAVTEGSGEETTVVAVVE 2111
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGH--TTAKMAAAVAK 193
T AD S TTT TTK + T TT S T+ TT A A
Sbjct: 147 TTADTTTTESETTTEASATTAAS-TTKDSETTTEASATTAASTTKDSETTTEASATTAAT 205
Query: 192 PPENHVVTPDATSV 151
+ + T ++ SV
Sbjct: 206 TTQESITTTESDSV 219
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGH--TTAKMAAAVAK 193
T AD S TTT TTK + T TT S T+ TT A A
Sbjct: 147 TTADTTTTESETTTEASATTAAS-TTKDSETTTEASATTAASTTKDSETTTEASATTAAT 205
Query: 192 PPENHVVTPDATSV 151
+ + T ++ SV
Sbjct: 206 TTQESITTTESDSV 219
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGH--TTAKMAAAVAK 193
T AD S TTT TTK + T TT S T+ TT A A
Sbjct: 147 TTADTTTTESETTTEASATTAAS-TTKDSETTTEASATTAASTTKDSETTTEASATTAAT 205
Query: 192 PPENHVVTPDATSV 151
+ + T ++ SV
Sbjct: 206 TTQESITTTESDSV 219
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGH--TTAKMAAAVAK 193
T AD S TTT TTK + T TT S T+ TT A A
Sbjct: 147 TTADTTTTESETTTEASATTAAS-TTKDSETTTEASATTAASTTKDSETTTEASATTAAT 205
Query: 192 PPENHVVTPDATSV 151
+ + T ++ SV
Sbjct: 206 TTQESITTTESDSV 219
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
T+A + TTT+ E + E TT P + TT ++VT+G AV +
Sbjct: 2054 TSAVTEGSGEETTTSAVTEASSEATTTPAGTEASGEETTTSAVTEGSGEETTVVAVVE 2111
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
T+A + TTT+ E + E TT P + TT ++VT+G AV +
Sbjct: 2054 TSAVTEGSGEETTTSAVTEASSEATTTPAGTEASGEETTTSAVTEGSGEETTVVAVVE 2111
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 345 PSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMA 208
PSS +++ K + + ++ P Q+L T TT T+ G T+ A
Sbjct: 277 PSSKRSSSAKRDAPLQQSSTPQQRLKTPASTTTTASRSGSRTSSRA 322
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform d protein.
Length = 1379
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 372 SPTAADIKAPS-SYTTTTVKPELNKELTTKPDQKLTTKYFTTE 247
SP A+++ P TT+ ++ + T + +LTTK+ TE
Sbjct: 1054 SPIVAEVRRPKLKKENTTIGCTISNQKATSANAELTTKHVNTE 1096
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 372 SPTAADIKAPS-SYTTTTVKPELNKELTTKPDQKLTTKYFTTE 247
SP A+++ P TT+ ++ + T + +LTTK+ TE
Sbjct: 1054 SPIVAEVRRPKLKKENTTIGCTISNQKATSANAELTTKHVNTE 1096
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform a protein.
Length = 1633
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 372 SPTAADIKAPS-SYTTTTVKPELNKELTTKPDQKLTTKYFTTE 247
SP A+++ P TT+ ++ + T + +LTTK+ TE
Sbjct: 1054 SPIVAEVRRPKLKKENTTIGCTISNQKATSANAELTTKHVNTE 1096
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 372 SPTAADIKAPS-SYTTTTVKPELNKELTTKPDQKLTTKYFTTE 247
SP A+++ P TT+ ++ + T + +LTTK+ TE
Sbjct: 1054 SPIVAEVRRPKLKKENTTIGCTISNQKATSANAELTTKHVNTE 1096
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
T+A + TTT+ E + E TT P + TT ++VT+G AV +
Sbjct: 2054 TSAVTEGSGEETTTSAVTEASSEATTTPAGTEASGEETTTSAVTEGSGEETTVVAVVE 2111
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 366 TAADIKAPSSYTTTTVKPELNKELTTKPDQKLTTKYFTTETSVTQGHTTAKMAAAVAK 193
T+A + TTT+ E + E TT P + TT ++VT+G AV +
Sbjct: 2054 TSAVTEGSGEETTTSAVTEASSEATTTPAGTEASGEETTTSAVTEGSGEETTVVAVVE 2111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,931,923
Number of Sequences: 27780
Number of extensions: 219952
Number of successful extensions: 1040
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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