Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12a17
(701 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024204-1|ABC86266.1| 513|Drosophila melanogaster RE45749p pro... 64 2e-10
AE014297-3738|AAN14042.1| 515|Drosophila melanogaster CG31106-P... 64 2e-10
BT003805-1|AAO41488.1| 489|Drosophila melanogaster AT15560p pro... 58 1e-08
AE014296-501|AAS64949.1| 488|Drosophila melanogaster CG33233-PA... 54 2e-07
AE014298-941|AAN09181.1| 632|Drosophila melanogaster CG3168-PC,... 52 1e-06
AE014298-940|AAN09180.1| 632|Drosophila melanogaster CG3168-PB,... 52 1e-06
AE014298-939|AAF46193.2| 632|Drosophila melanogaster CG3168-PA,... 52 1e-06
AL109630-12|CAB65877.1| 558|Drosophila melanogaster EG:BACR7A4.... 50 2e-06
AE014298-135|AAF45574.3| 558|Drosophila melanogaster CG3690-PA ... 50 2e-06
BT024986-1|ABE01216.1| 338|Drosophila melanogaster IP12106p pro... 47 2e-05
AE014298-1677|AAF48086.1| 529|Drosophila melanogaster CG15221-P... 47 2e-05
AE014297-1184|AAF54546.3| 563|Drosophila melanogaster CG31272-P... 42 8e-04
AY070961-1|AAL48583.1| 563|Drosophila melanogaster RE06169p pro... 40 0.002
L19876-1|AAA65877.1| 601|Drosophila melanogaster molybdenum cof... 29 6.1
AY069078-1|AAL39223.1| 601|Drosophila melanogaster GH09380p pro... 29 6.1
AY051412-1|AAK92836.1| 555|Drosophila melanogaster GH09241p pro... 29 6.1
AL050231-4|CAB65852.1| 601|Drosophila melanogaster EG:BACR37P7.... 29 6.1
AL050231-3|CAB65851.1| 674|Drosophila melanogaster EG:BACR37P7.... 29 6.1
AE014298-7|AAF45488.1| 601|Drosophila melanogaster CG2945-PB, i... 29 6.1
AE014298-6|AAN09010.1| 601|Drosophila melanogaster CG2945-PA, i... 29 6.1
AE014297-2185|AAF55297.1| 485|Drosophila melanogaster CG6901-PA... 29 6.1
AE014297-2164|AAF55286.3| 555|Drosophila melanogaster CG6126-PA... 29 6.1
>BT024204-1|ABC86266.1| 513|Drosophila melanogaster RE45749p
protein.
Length = 513
Score = 63.7 bits (148), Expect = 2e-10
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Frame = -2
Query: 664 KLQNYTETVICNDEISHNTIYSGIFYGFFFCV---VTAIVAQGASRRRMLLIGILIVSGV 494
++Q IC+D I+ + I YG V + +V R+ + IG+ +
Sbjct: 357 QMQANASNKICDDHINTKSYIDTITYGSALIVGYILMGLVINTIGRKASISIGLTLAGAC 416
Query: 493 SCILVELKHPVANIIFFIL-MQSTAIGIGNVCSYFVDVYPTSYRGLATSLGMMTARLVSF 317
+ L+ +K VA ++ F L + + + + VD+ PT RG A + +M R S
Sbjct: 417 AIALIFIKDEVAIVVCFCLYLVLPGLCVSILSGAVVDLVPTHLRGKAVCICLMLGRTGSV 476
Query: 316 AGVNIIGNVITDYCTPTFYISAAFVFSGVIVCFFLP 209
G NIIG ++ YC+ TF + + FV + LP
Sbjct: 477 FGSNIIGVLLESYCSLTFGVFSGFVLVCASLTLLLP 512
>AE014297-3738|AAN14042.1| 515|Drosophila melanogaster CG31106-PA
protein.
Length = 515
Score = 63.7 bits (148), Expect = 2e-10
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Frame = -2
Query: 664 KLQNYTETVICNDEISHNTIYSGIFYGFFFCV---VTAIVAQGASRRRMLLIGILIVSGV 494
++Q IC+D I+ + I YG V + +V R+ + IG+ +
Sbjct: 359 QMQANASNKICDDHINTKSYIDTITYGSALIVGYILMGLVINTIGRKASISIGLTLAGAC 418
Query: 493 SCILVELKHPVANIIFFIL-MQSTAIGIGNVCSYFVDVYPTSYRGLATSLGMMTARLVSF 317
+ L+ +K VA ++ F L + + + + VD+ PT RG A + +M R S
Sbjct: 419 AIALIFIKDEVAIVVCFCLYLVLPGLCVSILSGAVVDLVPTHLRGKAVCICLMLGRTGSV 478
Query: 316 AGVNIIGNVITDYCTPTFYISAAFVFSGVIVCFFLP 209
G NIIG ++ YC+ TF + + FV + LP
Sbjct: 479 FGSNIIGVLLESYCSLTFGVFSGFVLVCASLTLLLP 514
>BT003805-1|AAO41488.1| 489|Drosophila melanogaster AT15560p
protein.
Length = 489
Score = 58.0 bits (134), Expect = 1e-08
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Frame = -2
Query: 649 TETVICNDEISHNTIYSGIFYGFFF--CVVTA-IVAQGASRRRMLLIGILIVSGVSCILV 479
+E+ CNDE+++ + ++YGF + C + A ++ +R+ ++ + ILI + L
Sbjct: 336 SESPKCNDEMTN--LIDPVYYGFTYIGCFILASVLVHWMTRKYVIALHILISMILGISLN 393
Query: 478 ELKHPVANIIFFILMQ-STAIGIGNVCSYFVDVYPTSYRGLATSLGMMTARLVSFAGVNI 302
+K P +IFF+LM + I S VD P + RG A + AR G +
Sbjct: 394 IMKQPTVVLIFFVLMMVLPGVLIPLATSVLVDCLPVNLRGKALCMVRSLARFGGVLGSTM 453
Query: 301 IGNVITDYCTPTFYISAAFVFSGVIVCFFLPAD 203
IG I C TF I + V++ F P D
Sbjct: 454 IGLFIRVTCDVTFNIFNLCLAICVVLAVFQPKD 486
>AE014296-501|AAS64949.1| 488|Drosophila melanogaster CG33233-PA,
isoform A protein.
Length = 488
Score = 54.0 bits (124), Expect = 2e-07
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Frame = -2
Query: 649 TETVICNDEISHNTIYSGIFYGFFF--CVVTA-IVAQGASRRRMLLIGILIVSGVSCILV 479
+E+ CNDE+++ + ++YGF + C + A ++ +R+ ++ + ILI + L
Sbjct: 336 SESPKCNDEMTN--LIDPVYYGFTYIGCFILASVLVHWMTRKYVIALHILISMILGISLN 393
Query: 478 ELKHPVANIIFFILMQ-STAIGIGNVCSYFVDVYPTSYRGLATSLGMMTARLVSFAGVNI 302
+K P +IFF+LM + I S VD P + RG A + AR G +
Sbjct: 394 IMKQPTVVLIFFVLMMVLPGVLIPLATSVLVDCLPVNLRGKALCMVRSLARFGGVLGSTM 453
Query: 301 IGNVITDYCTPTFYI 257
IG I C TF I
Sbjct: 454 IGLFIRVTCDVTFNI 468
>AE014298-941|AAN09181.1| 632|Drosophila melanogaster CG3168-PC,
isoform C protein.
Length = 632
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Frame = -2
Query: 562 AIVAQGASRRRMLLIGILIVSGV-SCILVELKHPVANIIFFILMQSTAIGIGNVC--SYF 392
AI+ R+ LI + +G+ S ++ ++ V N++ + S AI N
Sbjct: 505 AILGMDMLGRKFFLIAGTMTAGICSALMYFVRSSVQNLVVSAIF-SGAISAANAALDCLI 563
Query: 391 VDVYPTSYRGLATSLGMMTARLVSFAGVNIIGNVITDYC-TPTFYISAAFVFSGVIVCFF 215
+V+PT R ++ M+ ARL G +I ++ +YC +PTF +S + G ++C
Sbjct: 564 TEVFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCPSPTFIVSGLLIGGG-LMCLL 622
Query: 214 LP 209
LP
Sbjct: 623 LP 624
>AE014298-940|AAN09180.1| 632|Drosophila melanogaster CG3168-PB,
isoform B protein.
Length = 632
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Frame = -2
Query: 562 AIVAQGASRRRMLLIGILIVSGV-SCILVELKHPVANIIFFILMQSTAIGIGNVC--SYF 392
AI+ R+ LI + +G+ S ++ ++ V N++ + S AI N
Sbjct: 505 AILGMDMLGRKFFLIAGTMTAGICSALMYFVRSSVQNLVVSAIF-SGAISAANAALDCLI 563
Query: 391 VDVYPTSYRGLATSLGMMTARLVSFAGVNIIGNVITDYC-TPTFYISAAFVFSGVIVCFF 215
+V+PT R ++ M+ ARL G +I ++ +YC +PTF +S + G ++C
Sbjct: 564 TEVFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCPSPTFIVSGLLIGGG-LMCLL 622
Query: 214 LP 209
LP
Sbjct: 623 LP 624
>AE014298-939|AAF46193.2| 632|Drosophila melanogaster CG3168-PA,
isoform A protein.
Length = 632
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Frame = -2
Query: 562 AIVAQGASRRRMLLIGILIVSGV-SCILVELKHPVANIIFFILMQSTAIGIGNVC--SYF 392
AI+ R+ LI + +G+ S ++ ++ V N++ + S AI N
Sbjct: 505 AILGMDMLGRKFFLIAGTMTAGICSALMYFVRSSVQNLVVSAIF-SGAISAANAALDCLI 563
Query: 391 VDVYPTSYRGLATSLGMMTARLVSFAGVNIIGNVITDYC-TPTFYISAAFVFSGVIVCFF 215
+V+PT R ++ M+ ARL G +I ++ +YC +PTF +S + G ++C
Sbjct: 564 TEVFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCPSPTFIVSGLLIGGG-LMCLL 622
Query: 214 LP 209
LP
Sbjct: 623 LP 624
>AL109630-12|CAB65877.1| 558|Drosophila melanogaster EG:BACR7A4.13
protein.
Length = 558
Score = 50.4 bits (115), Expect = 2e-06
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Frame = -2
Query: 640 VICNDEISHNTIYSGIFYGFFFCVVTAIVAQGASRRRMLLIGILIVSGVSCILV---ELK 470
+I ++N I +G GF ++ + + ++ G+LI +G S +
Sbjct: 408 IITPSTYTNNLIVAGA--GFVAYMLAGFLVNLVGVKLIMTSGLLIAAGCSIGMYWSSSAA 465
Query: 469 HPVANIIFFILMQSTAIGIGNVCSYFVDVYPTSYRGLATSLGMMTARLVSFAGVNIIGNV 290
VA F+ M S I +V S V ++PTS R + SL MM RL S G +
Sbjct: 466 STVALASLFVTMGS--ISATSVISASVSLFPTSLRTMIVSLEMMFGRLGSLLGNIFFPAL 523
Query: 289 ITDYCTPTFYISAAFVFSGVIVCFFLPADRK 197
+ C P F + +AF+ +G + FLP K
Sbjct: 524 MGLGCVPPFLMISAFMLAGCFMAAFLPLKNK 554
>AE014298-135|AAF45574.3| 558|Drosophila melanogaster CG3690-PA
protein.
Length = 558
Score = 50.4 bits (115), Expect = 2e-06
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Frame = -2
Query: 640 VICNDEISHNTIYSGIFYGFFFCVVTAIVAQGASRRRMLLIGILIVSGVSCILV---ELK 470
+I ++N I +G GF ++ + + ++ G+LI +G S +
Sbjct: 408 IITPSTYTNNLIVAGA--GFVAYMLAGFLVNLVGVKLIMTSGLLIAAGCSIGMYWSSSAA 465
Query: 469 HPVANIIFFILMQSTAIGIGNVCSYFVDVYPTSYRGLATSLGMMTARLVSFAGVNIIGNV 290
VA F+ M S I +V S V ++PTS R + SL MM RL S G +
Sbjct: 466 STVALASLFVTMGS--ISATSVISASVSLFPTSLRTMIVSLEMMFGRLGSLLGNIFFPAL 523
Query: 289 ITDYCTPTFYISAAFVFSGVIVCFFLPADRK 197
+ C P F + +AF+ +G + FLP K
Sbjct: 524 MGLGCVPPFLMISAFMLAGCFMAAFLPLKNK 554
>BT024986-1|ABE01216.1| 338|Drosophila melanogaster IP12106p
protein.
Length = 338
Score = 47.2 bits (107), Expect = 2e-05
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Frame = -2
Query: 646 ETVICNDEISHNTIYSGIFYGFFFCVVTAIVAQ--GASRRRMLLIGILIVSGVSCILVEL 473
E C+ E+ +T I F V+ I A ++ LL+ ++++ + C LV L
Sbjct: 159 EASSCSVEVDTSTYQVMIIIAACFVVIYLIFAYIIDYMGKKNLLMAWMVLTMI-C-LVAL 216
Query: 472 KHPVANIIFFILMQSTAIGIGN----VCSYFVDVYPTSYRGLATSLGMMTARLVSFAGVN 305
H V ++ + + IGN V + ++ YPT + MM RL + G N
Sbjct: 217 -HYVEQFALVVIALTVVMAIGNCGGLVSTIAMEFYPTHINAMGMCFIMMVGRLGAVVGSN 275
Query: 304 IIGNVITDYCTPTFYISAAFVFSGVIVCFFLPADRKTNE 188
I+G ++ C P F+ A V + +FLP ++ +
Sbjct: 276 ILGRLLFASCDPIFWALLALVVLLCTLGYFLPEKARSQQ 314
>AE014298-1677|AAF48086.1| 529|Drosophila melanogaster CG15221-PA
protein.
Length = 529
Score = 47.2 bits (107), Expect = 2e-05
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Frame = -2
Query: 646 ETVICNDEISHNTIYSGIFYGFFFCVVTAIVAQ--GASRRRMLLIGILIVSGVSCILVEL 473
E C+ E+ +T I F V+ I A ++ LL+ ++++ + C LV L
Sbjct: 350 EASSCSVEVDTSTYQVMIIIAACFVVIYLIFAYIIDYMGKKNLLMAWMVLTMI-C-LVAL 407
Query: 472 KHPVANIIFFILMQSTAIGIGN----VCSYFVDVYPTSYRGLATSLGMMTARLVSFAGVN 305
H V ++ + + IGN V + ++ YPT + MM RL + G N
Sbjct: 408 -HYVEQFALVVIALTVVMAIGNCGGLVSTIAMEFYPTHINAMGMCFIMMVGRLGAVVGSN 466
Query: 304 IIGNVITDYCTPTFYISAAFVFSGVIVCFFLPADRKTNE 188
I+G ++ C P F+ A V + +FLP ++ +
Sbjct: 467 ILGRLLFASCDPIFWALLALVVLLCTLGYFLPEKARSQQ 505
>AE014297-1184|AAF54546.3| 563|Drosophila melanogaster CG31272-PA
protein.
Length = 563
Score = 41.9 bits (94), Expect = 8e-04
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Frame = -2
Query: 640 VICNDEISHNTIYSGI-FYGFFFCVVTAIVAQGASRRRMLLIGILIVSGVSCILV-ELKH 467
VI D +N I S F G+FF + + +RM+ G+ + +L +
Sbjct: 413 VISMDMYLNNIIVSATGFVGYFFA---GGILRALGPKRMMTYGLFLSGTFGLMLYFSVSS 469
Query: 466 PVANIIFFILMQSTAIGIGNVCSYFVDVYPTSYRGLATSLGMMTARLVSFAGVNIIGNVI 287
+ I+ + T I + ++ V ++PT R + ++ MM R + +G + +
Sbjct: 470 LMTLIVSATFLTITGIAVSSLLGAVVALFPTQLRTVVVAIAMMCGRFGALSGNLLFPVFV 529
Query: 286 TDYCTPTF-YISAAFVFSGVI 227
C P F +S+ + SG++
Sbjct: 530 QTGCLPPFIMVSSVLILSGIL 550
>AY070961-1|AAL48583.1| 563|Drosophila melanogaster RE06169p
protein.
Length = 563
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Frame = -2
Query: 640 VICNDEISHNTIYSGI-FYGFFFCVVTAIVAQGASRRRMLLIGILIVSGVSCILV-ELKH 467
VI D +N I S F G FF + + +RM+ G+ + +L +
Sbjct: 413 VISMDMYLNNIIVSATGFVGHFFA---GGILRALGPKRMMTYGLFLSGTFGLMLYFSVSS 469
Query: 466 PVANIIFFILMQSTAIGIGNVCSYFVDVYPTSYRGLATSLGMMTARLVSFAGVNIIGNVI 287
+ I+ + T I + ++ V ++PT R + ++ MM R + +G + +
Sbjct: 470 LMTLIVSATFLTITGIAVSSLLGAVVALFPTQLRTVVVAIAMMCGRFGALSGNLLFPVFV 529
Query: 286 TDYCTPTF-YISAAFVFSGVI 227
C P F +S+ + SG++
Sbjct: 530 QTGCLPPFIMVSSVLILSGIL 550
>L19876-1|AAA65877.1| 601|Drosophila melanogaster molybdenum
cofactor protein.
Length = 601
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 104 YFFLFPNNPNHFWISFLLFFFPVIQIAS 187
YFF P NP +++F LF P I+ A+
Sbjct: 479 YFFGLPGNPVSAFVTFHLFALPAIRFAA 506
>AY069078-1|AAL39223.1| 601|Drosophila melanogaster GH09380p
protein.
Length = 601
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 104 YFFLFPNNPNHFWISFLLFFFPVIQIAS 187
YFF P NP +++F LF P I+ A+
Sbjct: 479 YFFGLPGNPVSAFVTFHLFALPAIRFAA 506
>AY051412-1|AAK92836.1| 555|Drosophila melanogaster GH09241p
protein.
Length = 555
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 568 VTAIVAQGASRRRMLLIGILIVSGVSCILVELKHPVANIIFFILMQSTAIGIGN---VCS 398
+T + RR + +++ G+ CI+ + ++M + G+ + +
Sbjct: 380 ITIVFVLDRLGRRSITSTLMLGGGLCCIVAAYIAQGSTTSTAVVMAGKLLIAGSFAVIYN 439
Query: 397 YFVDVYPTSYRGLATSLGMMTARL 326
Y +++PT R A LG M ARL
Sbjct: 440 YSAELFPTVVRNSAMGLGSMCARL 463
>AL050231-4|CAB65852.1| 601|Drosophila melanogaster
EG:BACR37P7.3,FBgn0000316;cin protein.
Length = 601
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 104 YFFLFPNNPNHFWISFLLFFFPVIQIAS 187
YFF P NP +++F LF P I+ A+
Sbjct: 479 YFFGLPGNPVSAFVTFHLFALPAIRFAA 506
>AL050231-3|CAB65851.1| 674|Drosophila melanogaster
EG:BACR37P7.3,FBgn0000316;cin protein.
Length = 674
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 104 YFFLFPNNPNHFWISFLLFFFPVIQIAS 187
YFF P NP +++F LF P I+ A+
Sbjct: 552 YFFGLPGNPVSAFVTFHLFALPAIRFAA 579
>AE014298-7|AAF45488.1| 601|Drosophila melanogaster CG2945-PB,
isoform B protein.
Length = 601
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 104 YFFLFPNNPNHFWISFLLFFFPVIQIAS 187
YFF P NP +++F LF P I+ A+
Sbjct: 479 YFFGLPGNPVSAFVTFHLFALPAIRFAA 506
>AE014298-6|AAN09010.1| 601|Drosophila melanogaster CG2945-PA,
isoform A protein.
Length = 601
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 104 YFFLFPNNPNHFWISFLLFFFPVIQIAS 187
YFF P NP +++F LF P I+ A+
Sbjct: 479 YFFGLPGNPVSAFVTFHLFALPAIRFAA 506
>AE014297-2185|AAF55297.1| 485|Drosophila melanogaster CG6901-PA
protein.
Length = 485
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 571 VVTAIVAQGASRRRMLLIGILIVSGVSCILVELKHPVANIIFFILMQS 428
+V I R+ + L+G+L+++G+ L L V N+I F LM S
Sbjct: 329 MVALIFLDTLGRKAVSLVGLLVMAGLMLGLAGLYANVTNLISFNLMTS 376
>AE014297-2164|AAF55286.3| 555|Drosophila melanogaster CG6126-PA
protein.
Length = 555
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 568 VTAIVAQGASRRRMLLIGILIVSGVSCILVELKHPVANIIFFILMQSTAIGIGN---VCS 398
+T + RR + +++ G+ CI+ + ++M + G+ + +
Sbjct: 380 ITIVFVLDRLGRRSITSTLMLGGGLCCIVAAYIAQGSTTSTAVVMAGKLLIAGSFAVIYN 439
Query: 397 YFVDVYPTSYRGLATSLGMMTARL 326
Y +++PT R A LG M ARL
Sbjct: 440 YSAELFPTVVRNSAMGLGSMCARL 463
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,354,829
Number of Sequences: 53049
Number of extensions: 554900
Number of successful extensions: 1295
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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