Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt12a05
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 381 e-106
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 377 e-105
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 374 e-104
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 364 e-101
03_01_0034 + 318432-318825,318902-319851 144 4e-35
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 143 1e-34
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 143 1e-34
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 142 2e-34
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 142 2e-34
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 142 2e-34
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 142 2e-34
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 139 2e-33
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 60 2e-09
05_07_0242 + 28615573-28616304 33 0.26
01_06_1014 - 33810112-33811995 31 0.61
11_06_0030 - 19415263-19415388,19415649-19415728,19416196-194162... 31 0.80
07_03_1418 - 26421341-26421527,26421618-26423157,26424293-26424524 31 0.80
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 30 1.9
09_01_0005 - 193214-193228,193659-193776,193876-194072,194534-19... 29 2.4
02_05_0316 - 27825871-27826509 29 2.4
08_01_0496 + 4319646-4320371,4321007-4321045 29 3.2
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 3.2
01_01_1149 - 9134390-9134600,9134732-9134790,9135650-9135724,913... 29 3.2
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 4.3
05_05_0013 - 21509307-21509493,21509762-21510123 29 4.3
04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065 29 4.3
07_03_0033 + 12656255-12656297,12657402-12657408,12657484-126580... 28 5.6
04_03_0664 + 18501248-18502802,18503370-18505054 28 5.6
02_02_0574 - 11701359-11701460,11701469-11701570,11701725-117019... 28 5.6
01_01_1078 + 8489872-8490168,8490280-8490462,8490667-8490908,849... 28 5.6
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 28 7.5
03_06_0709 - 35670153-35670350,35671206-35671259,35672444-356725... 28 7.5
01_04_0043 + 15375459-15377606 28 7.5
10_08_0842 - 20954712-20957738 27 9.9
09_04_0514 - 18236061-18237392 27 9.9
06_01_0500 + 3584743-3585516 27 9.9
05_06_0230 + 26585439-26586608 27 9.9
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 27 9.9
01_01_1141 + 9052511-9052573,9052626-9052928 27 9.9
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 381 bits (938), Expect = e-106
Identities = 169/195 (86%), Positives = 185/195 (94%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
FDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSV EITNA FEP++ M
Sbjct: 244 FDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMA 303
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPP+VV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVV 363
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
PGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 115 DLAALEKDYEEVGMD 71
DLAALEKDYEEVG +
Sbjct: 424 DLAALEKDYEEVGAE 438
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 377 bits (928), Expect = e-105
Identities = 167/196 (85%), Positives = 185/196 (94%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
FDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSVAEITN+ FEP++ M
Sbjct: 244 FDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 303
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPP+VV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVV 363
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
P GDLAKVQRAVCM+SN+T++ E ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARE 423
Query: 115 DLAALEKDYEEVGMDS 68
DLAALEKDYEEVG +S
Sbjct: 424 DLAALEKDYEEVGAES 439
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 374 bits (919), Expect = e-104
Identities = 166/195 (85%), Positives = 184/195 (94%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
FDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSVAEITN+ FEP++ M
Sbjct: 244 FDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 303
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPP+VV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVV 363
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
PGGDLAKVQRAVCM+SN+T++ E ++R+D KFDLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEARE 423
Query: 115 DLAALEKDYEEVGMD 71
DLAALEKDYEEVG +
Sbjct: 424 DLAALEKDYEEVGSE 438
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 364 bits (896), Expect = e-101
Identities = 160/195 (82%), Positives = 180/195 (92%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
FDGA+NVD+TEFQTNLVPYPRIHF L +YAP+IS EKA+HEQ SV EITN+ FEPA+ M
Sbjct: 325 FDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVMA 384
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
KCDPRHGKYMACC++YRGDVVPKDVNAA+ +IKT+RT+QFVDWCPTGFK GINYQPPT V
Sbjct: 385 KCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAV 444
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
PGGDLAKV+RAVCM+SN TA+AE ++R+D KFDLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 445 PGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 504
Query: 115 DLAALEKDYEEVGMD 71
DLAALEKDYEEVG +
Sbjct: 505 DLAALEKDYEEVGAE 519
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 144 bits (350), Expect = 4e-35
Identities = 66/191 (34%), Positives = 110/191 (57%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
F G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++ N M
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT-- 359
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 ------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 115 DLAALEKDYEE 83
++ L +Y++
Sbjct: 414 NMNDLVSEYQQ 424
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 143 bits (346), Expect = 1e-34
Identities = 65/191 (34%), Positives = 109/191 (57%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
F G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++ N M
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP--- 358
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 359 -----RGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 115 DLAALEKDYEE 83
++ L +Y++
Sbjct: 414 NMNDLVAEYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 143 bits (346), Expect = 1e-34
Identities = 65/191 (34%), Positives = 109/191 (57%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
F G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++ N M
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPN-- 359
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 ------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 115 DLAALEKDYEE 83
++ L +Y++
Sbjct: 414 NMNDLVAEYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 142 bits (345), Expect = 2e-34
Identities = 65/191 (34%), Positives = 109/191 (57%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
F G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++ N M
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP--- 358
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 359 -----IGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 115 DLAALEKDYEE 83
++ L +Y++
Sbjct: 414 NMNDLVAEYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 142 bits (345), Expect = 2e-34
Identities = 65/191 (34%), Positives = 108/191 (56%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
F G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++ N M
Sbjct: 263 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 322
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 323 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--- 379
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
+ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 380 -----RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 434
Query: 115 DLAALEKDYEE 83
++ L +Y++
Sbjct: 435 NMNDLVSEYQQ 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 142 bits (345), Expect = 2e-34
Identities = 65/191 (34%), Positives = 108/191 (56%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
F G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++ N M
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 301
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 302 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--- 358
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
+ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 359 -----RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 115 DLAALEKDYEE 83
++ L +Y++
Sbjct: 414 NMNDLVSEYQQ 424
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 142 bits (344), Expect = 2e-34
Identities = 65/191 (34%), Positives = 108/191 (56%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
F G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++ N M
Sbjct: 422 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 481
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 482 AADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--- 538
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
+ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 539 -----RGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 593
Query: 115 DLAALEKDYEE 83
++ L +Y++
Sbjct: 594 NMNDLVSEYQQ 604
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 139 bits (337), Expect = 2e-33
Identities = 64/191 (33%), Positives = 107/191 (56%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 476
F G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++ N M
Sbjct: 258 FPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMC 317
Query: 475 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 296
DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 318 AADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--- 374
Query: 295 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 116
+ A + N+T+I E + R+ +F M+ ++AF+HWY EGM+E EF+EA
Sbjct: 375 -----VGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAES 429
Query: 115 DLAALEKDYEE 83
++ L +Y++
Sbjct: 430 NMNDLVAEYQQ 440
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 59.7 bits (138), Expect = 2e-09
Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
Frame = -1
Query: 655 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEKAYHEQLSVAEITNACFEPANQM 479
+ G +N DL +L+P PR HF + Y P+ + + + +V ++ + N M
Sbjct: 245 YPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIM 304
Query: 478 VKCDPRH-----GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 314
V R+ KY++ + +G+V P V+ ++ I+ ++ + F++W P
Sbjct: 305 VSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGP--------- 355
Query: 313 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY----VGEGM 146
A +Q + ML+N T+I +++ +++ + K+AF+ Y + E
Sbjct: 356 -----------ASIQVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDN 404
Query: 145 EEGEFSEAREDLAALEKDYE 86
+ EF E+RE + +L +Y+
Sbjct: 405 DLSEFDESREIIESLVDEYK 424
>05_07_0242 + 28615573-28616304
Length = 243
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +1
Query: 40 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTCGQGE 219
L +P P R P LL P + QP PH L PP+P+ T + T + +G
Sbjct: 91 LLIPSPPTPRVP--LLMPPPQPQPHPHPQHPYLHPPFPYHHTPSGSGGTTTESSSEERGP 148
Query: 220 P 222
P
Sbjct: 149 P 149
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.61
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 187 AKRAFVHWYVGEGMEEGEFSEAREDL 110
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>11_06_0030 -
19415263-19415388,19415649-19415728,19416196-19416232,
19416338-19416460,19417195-19417242,19417335-19417378,
19417461-19417506,19417581-19417623,19418329-19418422,
19418503-19418604,19419936-19420014,19420698-19420964
Length = 362
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 383 GSDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVG 544
G + ILG+ +TT ++T + + GV + G+ C G LF+ G
Sbjct: 166 GHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 219
>07_03_1418 - 26421341-26421527,26421618-26423157,26424293-26424524
Length = 652
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 359 LDSTLGFDGSDGRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 499
+ S L G G V I Y D+ + + +H L+ TG++ +H+ G++
Sbjct: 33 MSSALAAAGYTGPVSISAYGDIGRIGNAVTHALSSTGISLNHVPAGIK 80
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 49 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARK 177
P PR + P R + +P P RRT P P H T +R+
Sbjct: 265 PSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRR 307
>09_01_0005 -
193214-193228,193659-193776,193876-194072,194534-195493
Length = 429
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 551 REGLP*TAFRRRDHKRMLRARQPDGEMRPPSWQVHGL 441
REG P RR++ KRML RQP + Q+HG+
Sbjct: 75 REGPPAPEARRKERKRMLMPRQPSHD------QIHGI 105
>02_05_0316 - 27825871-27826509
Length = 212
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 455 AMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDWR 568
A+ V F LV A VC GD + + G+ GRD+ R
Sbjct: 93 ALPVVRFDELVASAPAAVCGGGDCAVCLSGICGRDEVR 130
>08_01_0496 + 4319646-4320371,4321007-4321045
Length = 254
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Frame = +2
Query: 323 TDLETGWTPVDELDSTLGFDGSDGRV----HILGYDVTTVQHTASHVLAMTGVAFHHLVG 490
T L+ W P+ + L FDG +GR+ ++ ++ T + +L + G H
Sbjct: 40 TALDAQWIPLPLIQRVLVFDGGEGRIPPFEDVVAALRASLAETVARLLPLAGRIVHLPET 99
Query: 491 GLEACVCD----LGDGKLFMVGLL-GRDDWRVRDQWEVDTGVRHQVS 616
G A C G G F+V G D RV + D + Q++
Sbjct: 100 GEAAIDCSGRGVAGGGVRFVVAECGGADAARVARDADHDVALLEQLA 146
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 109 PGPHGLRRTLPPPYPHRRTSARKH 180
P H LR + PPP+PH R H
Sbjct: 19 PSAHLLRLSRPPPFPHLRRRCAPH 42
>01_01_1149 -
9134390-9134600,9134732-9134790,9135650-9135724,
9135815-9135934,9136012-9136183,9136277-9136335,
9136516-9136572,9136900-9136998,9137088-9137114,
9137607-9137649,9137779-9138023
Length = 388
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 494 LEACVCDLGDGKLFMVGLLGRDDWRVRDQWEVDTGVRHQ 610
L+ C+C DG +GLL W V + ++ T +H+
Sbjct: 28 LKYCLCSTRDGMALTLGLLSVISWGVAEVPQIITNYKHK 66
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 43 RLPHPRLQRSPCRLLRNPS-RGQPGPHGLRRTLPPPYPHRRTSARKHAWR 189
R P+P L PC L PS G G G PPP PH R + + A+R
Sbjct: 15 RSPNPNLNL-PCPLPPIPSCGGGGGGAGPTPPPPPPPPHHRRARSEVAFR 63
>05_05_0013 - 21509307-21509493,21509762-21510123
Length = 182
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 527 KLFMVGL--LGRDDWRVRDQWEVDTGVRHQVSLELGEVHIQSA 649
+LF+ GL GR DWR +W V T QV+ + I+ A
Sbjct: 121 RLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFFIRQA 163
>04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065
Length = 194
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 646 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 518
A ++D T +N VPY + TY P ++ K E+ S A
Sbjct: 126 ASSIDHTLNSSNAVPYDGTRYEQTTYGPTLTKRKPGKERSSTA 168
>07_03_0033 +
12656255-12656297,12657402-12657408,12657484-12658016,
12658106-12658224,12658329-12658688,12659602-12659784
Length = 414
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -2
Query: 183 SVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKSTKPMKYLL 13
S+ GT V V R+ S + PS ++ + + +PL A ++EPK T+ + + L
Sbjct: 357 SMAGSAGTGVNVGRQRSP----QVTAPSPQVHEPPSISPLCAAIQEPKYTRDLLHAL 409
>04_03_0664 + 18501248-18502802,18503370-18505054
Length = 1079
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/34 (23%), Positives = 22/34 (64%)
Frame = +2
Query: 404 ILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEAC 505
+L +++ ++H + ++ + +++HHL L+AC
Sbjct: 416 MLRENISNIEHNSEGIMKILRLSYHHLAPHLQAC 449
>02_02_0574 -
11701359-11701460,11701469-11701570,11701725-11701922,
11702090-11704052,11705312-11706126
Length = 1059
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/35 (25%), Positives = 24/35 (68%)
Frame = -1
Query: 478 VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 374
++C PR+ +Y++C L ++P+ +N+++ ++ T
Sbjct: 737 IRCSPRYLRYLSCGQL---SILPRWINSSLLSLST 768
>01_01_1078 +
8489872-8490168,8490280-8490462,8490667-8490908,
8490988-8491240
Length = 324
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 479 HLVGGLEACVCDLGDGKLFMVGLLGRDDWRVRDQWEV 589
HLVG L A + DLG ++F+ G DW W++
Sbjct: 83 HLVGDLVALIADLGRPQVFVAG----HDWGAVVAWQL 115
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 61 LQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWR 189
L R+ CR+ +P +P H L +P P+PH +A + A+R
Sbjct: 285 LLRAACRVRASPCL-RPLAHHLLDHIPRPHPHLLHAAARLAYR 326
>03_06_0709 -
35670153-35670350,35671206-35671259,35672444-35672527,
35672688-35672902,35673959-35674058,35674178-35674276
Length = 249
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 59 AFSGVHADFFVILLEGSQVLTG 124
+F G ADFF +LL G+ VLTG
Sbjct: 88 SFRGRTADFFYMLLFGATVLTG 109
>01_04_0043 + 15375459-15377606
Length = 715
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -1
Query: 433 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 254
LY D DV A + + +Q ++ P G+++G PP V G + + R +C
Sbjct: 180 LYGQDQGDHDVQAPPLLVMGEEKLQ-IEARPQGYRIGRTSPPPLCVDAGHVVTMDR-ICR 237
Query: 253 L 251
L
Sbjct: 238 L 238
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 393 PSLPSKPSVLSNSSTGVQPVSRSVSTT 313
PSLPS+P+ L S++ QP +R V T
Sbjct: 257 PSLPSRPAGLGASTSLSQPSARPVQQT 283
>09_04_0514 - 18236061-18237392
Length = 443
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 350 VDELDSTLGFDGSDGRVHILGYDVTTVQHTASHVLAMTGVA 472
+D L + L GSDGRVH+ + ++ H T A
Sbjct: 254 LDHLAARLFAGGSDGRVHVASLSPAAITSSSWHASGNTNAA 294
>06_01_0500 + 3584743-3585516
Length = 257
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 97 SRGQPGPHGLRRTLPPPYPHRRTSA 171
S+ P P +R PPP PHRR A
Sbjct: 9 SKKMPTPAVMRIRSPPPDPHRRARA 33
>05_06_0230 + 26585439-26586608
Length = 389
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 610 LVPYPRI-HFPLVTYAPVISAEKAYHEQLSVAEITNAC 500
L+ P + HFP + Y PV+ K H Q+S+ T +C
Sbjct: 94 LLVLPNVTHFPDMVYPPVLGVVKRDH-QISIVAATLSC 130
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 49 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHR 159
P P S R PS P P + PPP PHR
Sbjct: 21 PKPFKPLSSAAPFRRPSPPPPPPSPVPSPAPPPPPHR 57
>01_01_1141 + 9052511-9052573,9052626-9052928
Length = 121
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +1
Query: 52 HPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTCGQG 216
H R+ L P G P PHG +R P R +A A ++ G +C G
Sbjct: 9 HCSAARAAVALPPLPLAGSPQPHGTKRRPVEPASRRLPAAAAPARQSTGGSCEVG 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,020,961
Number of Sequences: 37544
Number of extensions: 534731
Number of successful extensions: 2240
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2229
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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