Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11p01
(478 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 64 1e-11
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 49 3e-07
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 43 2e-05
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 38 8e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 38 0.001
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 37 0.001
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 36 0.002
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 32 0.039
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 30 0.16
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 30 0.21
SPAC1002.06c |bqt2|mug18, rec23|bouquet formation protein Bqt2|S... 27 1.1
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 27 1.9
SPBC18H10.09 |||zinc finger protein, zf-CHY type|Schizosaccharom... 26 3.4
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 25 4.5
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch... 25 4.5
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 25 5.9
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 25 5.9
SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 7.9
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 25 7.9
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 25 7.9
SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 7.9
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 64.1 bits (149), Expect = 1e-11
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Frame = -3
Query: 470 LKLHMQLHNDVKKFKC--SKCEDMLPTKNCLKIHMKKHTKVKNFKCDY--CHKLFVSKIT 303
L+ H++ H++ + F C + C K+ LKIH + HT VK F C Y C F ++
Sbjct: 40 LEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQH 99
Query: 302 MERHRQTH-EGQPIDCQVK-CTQCDRTMHSTLLRTHIARAHSSSLDDDVKRPYKCT--TC 135
+ERH + H + +P C + C +C + H LR+HI+ H+ L PY CT C
Sbjct: 100 LERHIEVHRKPKPYACTWEGCDEC-FSKHQQ-LRSHISACHTHLL------PYPCTYQDC 151
Query: 134 GKSFIVKINLNLHIRVCH 81
F K L H+ H
Sbjct: 152 ELRFATKQKLQNHVNRAH 169
Score = 45.6 bits (103), Expect = 4e-06
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Frame = -3
Query: 452 LHNDVKKFKC--SKCEDMLPTKNCLKIHMKKHTKVKNFKCDY--CHKLFVSKITMERHRQ 285
L + K F C +C + L+ H++ H+ + F CDY C K F K ++ H++
Sbjct: 16 LRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKR 75
Query: 284 THEG-QPIDCQVKCTQCDRTMHSTL-LRTHIARAHSSSLDDDVKRPYKCT--TCGKSFIV 117
H +P C CD ++ L HI H +PY CT C + F
Sbjct: 76 CHTNVKPFSCHY--DGCDAQFYTQQHLERHI-EVHRK------PKPYACTWEGCDECFSK 126
Query: 116 KINLNLHIRVCH 81
L HI CH
Sbjct: 127 HQQLRSHISACH 138
Score = 45.2 bits (102), Expect = 5e-06
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Frame = -3
Query: 476 AYLKLHMQLHNDVKKFKC--SKCEDMLPTKNCLKIHMKKHTKVKNFKCDY--CHKLFVSK 309
++LK+H + H +VK F C C+ T+ L+ H++ H K K + C + C + F
Sbjct: 68 SHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKH 127
Query: 308 ITMERHRQTHEGQPIDCQVKCTQCD-RTMHSTLLRTHIARAHSSSLDDDVKRPYKCTTCG 132
+ H + C+ R L+ H+ RAH + P++
Sbjct: 128 QQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKII--SYSCPHESCVGH 185
Query: 131 KSFIVKINLNLHIRVCH 81
+ F L HIR H
Sbjct: 186 EGFEKWSQLQNHIREAH 202
Score = 27.9 bits (59), Expect = 0.84
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Frame = -3
Query: 476 AYLKLHMQLHNDV----KKFKCSK--CEDMLPTKNCLKIHMKK-HTKVKNFKCDYCHKLF 318
A+L+ H+ LH K + C C+ + LK H+ H F CD C F
Sbjct: 217 AHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKF 276
Query: 317 VSKITMERH 291
K ++RH
Sbjct: 277 GYKHMLQRH 285
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 49.2 bits (112), Expect = 3e-07
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = -3
Query: 470 LKLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERH 291
LK HM H + + F+CS C+ ++ + H + HT +K F C C++ F + RH
Sbjct: 587 LKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Query: 290 RQTHEGQ 270
++ GQ
Sbjct: 647 YKSEVGQ 653
Score = 41.9 bits (94), Expect = 5e-05
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 386 LKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQTHEGQPIDCQVKCTQ 240
LK HM HT + F+C C K F + RH Q H G V C Q
Sbjct: 587 LKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQ 635
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 43.2 bits (97), Expect = 2e-05
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 434 KFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDY--CHKLFVSKITMERHRQTH 279
+++C++C + LKIH HT + F CDY C K F + M RH++ H
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 26.6 bits (56), Expect = 1.9
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 311 KITMERHRQTHEGQPIDCQVKCTQCDRTMHSTLLRTHIARAHSSSLDDDVKRPYKC--TT 138
KI + + + +CT+C + R + H+ S + RP+ C
Sbjct: 449 KIAQSHTGSSSTSSAANVRYRCTECLQGFS----RPSSLKIHTYSHTGE--RPFVCDYAG 502
Query: 137 CGKSFIVKINLNLHIRV 87
CGK+F V+ N+ H R+
Sbjct: 503 CGKAFNVRSNMRRHQRI 519
Score = 25.4 bits (53), Expect = 4.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 224 HSTLLRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLH 96
HST + + SSS Y+CT C + F +L +H
Sbjct: 444 HSTSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIH 486
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 37.9 bits (84), Expect = 8e-04
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -3
Query: 434 KFKC--SKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQTHE-GQPI 264
K+ C + C + K ++ H++ H + ++CD C FV ++RH + HE G+P
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPY 501
Query: 263 DCQ 255
C+
Sbjct: 502 VCE 504
Score = 34.3 bits (75), Expect = 0.010
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = -3
Query: 461 HMQLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQ 285
H+Q H + ++C C+ + LK H++ H + + C+ C K F + RH+Q
Sbjct: 463 HIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHKQ 520
Score = 27.1 bits (57), Expect = 1.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 158 RPYKCTTCGKSFIVKINLNLHIRV 87
RPY+C C F+ +L H+R+
Sbjct: 471 RPYRCDLCKAGFVRHHDLKRHLRI 494
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.5 bits (83), Expect = 0.001
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 347 FKCDYCHKLFVSKITMERHRQTH-EGQPIDCQVKCTQCDRTMHSTLLRTHIARAHS 183
F CD C K F + RH+ H + +PI C +C R LL+ HI R H+
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKR---KDLLKRHIQRFHN 83
Score = 29.5 bits (63), Expect = 0.28
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = -3
Query: 431 FKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQ 285
F C +C L H H+K + C YC K ++RH Q
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 37.1 bits (82), Expect = 0.001
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 440 VKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDY--CHKLFVSKITMERHRQTH 279
+K ++C C+ + + H++ HT K F+C Y C K F + + RH +TH
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 32.7 bits (71), Expect = 0.030
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -3
Query: 356 VKNFKCDYCHKLFVSKITMERHRQTHEGQ-PIDCQVKCTQCDRTMHSTLL---RTHIARA 189
+K+++C +C ++F + RH ++H G+ P +C + T L+ RTH+ +A
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKA 60
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 36.3 bits (80), Expect = 0.002
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -3
Query: 434 KFKCS--KCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERHRQ 285
+F C+ C K L+ H + H VK F C +C++ F + RH Q
Sbjct: 25 RFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 32.7 bits (71), Expect = 0.030
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -3
Query: 347 FKCDY--CHKLFVSKITMERHRQTHEGQPIDCQVKCTQCDRTM-HSTLLRTHIARAH 186
F C Y C K F K + RH +THE C+ C+R S +L H+ + H
Sbjct: 26 FYCTYPDCPKSFTRKEHLRRHERTHENVK---AFSCSFCNRAFARSDVLNRHVQQMH 79
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 32.3 bits (70), Expect = 0.039
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = -3
Query: 434 KFKCS--KCEDMLPTKNCLKIHMKKHTKVKNFKCDYCHKLFVSKITMERH-RQTHEGQ 270
++KC C K + H + HT K F C +C F + RH Q H Q
Sbjct: 16 RYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQ 73
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 30.3 bits (65), Expect = 0.16
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 227 MHSTLLRTHIARAHSSSLDDDVKRPYKCTTCGKSFIVKINLNLHIR 90
M T + S+ + D RPYKC C K+F + HIR
Sbjct: 1 MSEATTATTTGKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIR 46
Score = 26.2 bits (55), Expect = 2.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 347 FKCDYCHKLFVSKITMERHRQTHEGQ-PIDCQVK-CTQCDRTMHSTLLRTHIARAHSSS 177
+KC C K F RH +TH G+ P C C + R S L H AR H+++
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAK--RFSRSDELTRH-ARIHTNA 81
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 29.9 bits (64), Expect = 0.21
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Frame = -3
Query: 440 VKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDY-------CHKLFVSKITMERHRQT 282
VK++ C C LK H++ HT K F C C + F + + RH+Q
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
Query: 281 HEGQP 267
P
Sbjct: 127 IHRNP 131
Score = 27.5 bits (58), Expect = 1.1
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -3
Query: 359 KVKNFKCDYCHKLFVSKITMERHRQTHEGQ-PIDC 258
KVK + C+ C + F ++RH ++H + P C
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC1002.06c |bqt2|mug18, rec23|bouquet formation protein
Bqt2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 118
Score = 27.5 bits (58), Expect = 1.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 455 QLHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYC 330
QLHN KF E+ +H++KH ++ N+K C
Sbjct: 22 QLHNGEAKFLAEGYENF---DYAFSMHLRKHVRLPNYKSVQC 60
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 26.6 bits (56), Expect = 1.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 347 FKCDYCHKLFVSKITMERHRQTH 279
F+CD C +FV + + H++T+
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTY 161
>SPBC18H10.09 |||zinc finger protein, zf-CHY
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 25.8 bits (54), Expect = 3.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 269 PIDCQVKCTQC 237
PIDCQV C +C
Sbjct: 244 PIDCQVSCMEC 254
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 4.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -1
Query: 100 YISEFAIRNWQILKTKMKI**RITHSL*DSCN 5
Y E AIR+W+I + + K+ ++T ++ + CN
Sbjct: 571 YEEELAIRDWKIAQLEDKL-AKLTEAIKEKCN 601
>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.4 bits (53), Expect = 4.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 254 LDSRSAVPHASDDVVPLLSSIQIIYDNNH 340
+D VP+ +D + LLS++ ++YD H
Sbjct: 253 MDLHKVVPNGEEDAIELLSAM-LVYDPAH 280
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 25.0 bits (52), Expect = 5.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 33 IRHYIFIFVFRICQFRMANSDM*IKIY 113
I HY++ FV R C + + IK Y
Sbjct: 301 ITHYLYGFVVRKCSYDLTKGTFKIKAY 327
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 25.0 bits (52), Expect = 5.9
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 467 KLHMQLHNDVKKFKCSKCEDMLPTKNCLKIHM--KKHTKVKNFKCDY 333
+L ++ N+++ F+C C K L+ HM K+H ++ +Y
Sbjct: 134 RLLEKIKNELESFRCLCCHVPCKNKKLLREHMNNKRHFRLDPKSSEY 180
>SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 416
Score = 24.6 bits (51), Expect = 7.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 137 TLCICKVVLHHRLVRMNEPSLYVCAV 214
T C CKV+++ +R+ E Y V
Sbjct: 274 TYCACKVIVYQFFLRIPETDTYTLVV 299
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 24.6 bits (51), Expect = 7.9
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = -3
Query: 452 LHNDVKKFKCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDY 333
L ++KF+C+ C D +C ++ H ++ DY
Sbjct: 165 LEFQIRKFQCNVCFDEFNGTDCFQLTRCGHVSCQSCLRDY 204
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 24.6 bits (51), Expect = 7.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 428 KCSKCEDMLPTKNCLKIHMKKHTKVKNFKCDYC 330
+C C + K CLK+ KK + + F C C
Sbjct: 1111 ECEICHEWYHAK-CLKMSKKKLRQDEKFTCPIC 1142
>SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 416
Score = 24.6 bits (51), Expect = 7.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 137 TLCICKVVLHHRLVRMNEPSLYVCAV 214
T C CKV+++ +R+ E Y V
Sbjct: 274 TYCACKVIVYQFFLRIPETDTYTLVV 299
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,937,894
Number of Sequences: 5004
Number of extensions: 38748
Number of successful extensions: 140
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 184476110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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