Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt11m24
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U17298-1|AAC50158.1|  380|Homo sapiens kappa opioid receptor pro...    31   3.2  
U11053-1|AAA20985.1|  380|Homo sapiens kappa opioid receptor pro...    31   3.2  
L37362-1|AAA63906.1|  380|Homo sapiens kappa opioid receptor pro...    31   3.2  
BC099912-1|AAH99912.1|  380|Homo sapiens opioid receptor, kappa ...    31   3.2  
AY168006-1|AAN87342.1|  366|Homo sapiens DRG kappa 1 splice vari...    31   3.2  
AF498922-1|AAM21070.1|  380|Homo sapiens opioid receptor kappa p...    31   3.2  
AL121749-3|CAC10185.1|  694|Homo sapiens frizzled homolog 8 (Dro...    30   7.3  
AB043703-1|BAB41064.1|  694|Homo sapiens seven-transmembrane rec...    30   7.3  

>U17298-1|AAC50158.1|  380|Homo sapiens kappa opioid receptor
           protein.
          Length = 380

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = +3

Query: 396 VLLYNILKTVTPLAVYN---SSTLPSKLFPYQANIYIMNSFCF 515
           ++ Y  +KT T + ++N   +  L +   P+Q+ +Y+MNS+ F
Sbjct: 84  IIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSWPF 126


>U11053-1|AAA20985.1|  380|Homo sapiens kappa opioid receptor
           protein.
          Length = 380

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = +3

Query: 396 VLLYNILKTVTPLAVYN---SSTLPSKLFPYQANIYIMNSFCF 515
           ++ Y  +KT T + ++N   +  L +   P+Q+ +Y+MNS+ F
Sbjct: 84  IIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSWPF 126


>L37362-1|AAA63906.1|  380|Homo sapiens kappa opioid receptor
           protein.
          Length = 380

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = +3

Query: 396 VLLYNILKTVTPLAVYN---SSTLPSKLFPYQANIYIMNSFCF 515
           ++ Y  +KT T + ++N   +  L +   P+Q+ +Y+MNS+ F
Sbjct: 84  IIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSWPF 126


>BC099912-1|AAH99912.1|  380|Homo sapiens opioid receptor, kappa 1
           protein.
          Length = 380

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = +3

Query: 396 VLLYNILKTVTPLAVYN---SSTLPSKLFPYQANIYIMNSFCF 515
           ++ Y  +KT T + ++N   +  L +   P+Q+ +Y+MNS+ F
Sbjct: 84  IIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSWPF 126


>AY168006-1|AAN87342.1|  366|Homo sapiens DRG kappa 1 splice variant
           KOR 1A protein.
          Length = 366

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = +3

Query: 396 VLLYNILKTVTPLAVYN---SSTLPSKLFPYQANIYIMNSFCF 515
           ++ Y  +KT T + ++N   +  L +   P+Q+ +Y+MNS+ F
Sbjct: 70  IIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSWPF 112


>AF498922-1|AAM21070.1|  380|Homo sapiens opioid receptor kappa
           protein.
          Length = 380

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = +3

Query: 396 VLLYNILKTVTPLAVYN---SSTLPSKLFPYQANIYIMNSFCF 515
           ++ Y  +KT T + ++N   +  L +   P+Q+ +Y+MNS+ F
Sbjct: 84  IIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSWPF 126


>AL121749-3|CAC10185.1|  694|Homo sapiens frizzled homolog 8
           (Drosophila) protein.
          Length = 694

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 375 RAFLSLHVLLYNILKTVTPLAVYNSSTLPSKLFPYQANIYIMNSFCFLFISV 530
           RAF    + L+++L  V+  A  ++  +  + F Y     I  S C+LF+SV
Sbjct: 274 RAFTVFWIGLWSVLCFVSTFATVSTFLIDMERFKYPERPIIFLSACYLFVSV 325


>AB043703-1|BAB41064.1|  694|Homo sapiens seven-transmembrane
           receptor Frizzled-8 protein.
          Length = 694

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 375 RAFLSLHVLLYNILKTVTPLAVYNSSTLPSKLFPYQANIYIMNSFCFLFISV 530
           RAF    + L+++L  V+  A  ++  +  + F Y     I  S C+LF+SV
Sbjct: 274 RAFTVFWIGLWSVLCFVSTFATVSTFLIDMERFKYPERPIIFLSACYLFVSV 325


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,946,554
Number of Sequences: 237096
Number of extensions: 1335366
Number of successful extensions: 5405
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5405
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)