Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11m23
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01042-1|AAD54608.1| 1093|Homo sapiens TATA element modulatory f... 60 7e-09
BC126123-1|AAI26124.1| 1093|Homo sapiens TATA element modulatory... 60 7e-09
BC117418-1|AAI17419.1| 1093|Homo sapiens TATA element modulatory... 60 7e-09
AB209109-1|BAD92346.1| 1096|Homo sapiens TATA element modulatory... 60 7e-09
DQ444714-1|ABE01857.1| 805|Homo sapiens cenexin 1 protein. 34 0.42
DQ444713-1|ABE01856.1| 824|Homo sapiens cenexin 1 variant 1 pro... 34 0.42
BC091500-1|AAH91500.1| 829|Homo sapiens ODF2 protein protein. 34 0.42
BC010629-1|AAH10629.1| 763|Homo sapiens outer dense fiber of sp... 34 0.42
AY366499-1|AAQ73195.1| 805|Homo sapiens outer dense fiber of sp... 34 0.42
AY319414-1|AAP83847.1| 657|Homo sapiens outer dense fiber of sp... 34 0.42
AL445287-6|CAH71069.1| 805|Homo sapiens outer dense fiber of sp... 34 0.42
AL445287-5|CAH71068.1| 765|Homo sapiens outer dense fiber of sp... 34 0.42
AL445287-4|CAH71067.1| 638|Homo sapiens outer dense fiber of sp... 34 0.42
AL445287-3|CAH71066.1| 701|Homo sapiens outer dense fiber of sp... 34 0.42
AL359091-23|CAI13506.1| 805|Homo sapiens outer dense fiber of s... 34 0.42
AL359091-22|CAI13505.1| 765|Homo sapiens outer dense fiber of s... 34 0.42
AL359091-17|CAI13500.1| 638|Homo sapiens outer dense fiber of s... 34 0.42
AL359091-16|CAI13499.1| 701|Homo sapiens outer dense fiber of s... 34 0.42
AF053970-1|AAC08409.1| 610|Homo sapiens outer dense fiber prote... 34 0.42
AF012549-1|AAB66337.1| 638|Homo sapiens outer dense fiber prote... 34 0.42
X03445-1|CAA27174.1| 572|Homo sapiens protein ( Human mRNA for ... 31 5.1
X03444-1|CAA27173.1| 702|Homo sapiens protein ( Human mRNA for ... 31 5.1
M13452-1|AAA36160.1| 515|Homo sapiens protein ( Human lamin A m... 31 5.1
M13451-1|AAA36164.1| 572|Homo sapiens protein ( Human lamin C m... 31 5.1
BC033088-1|AAH33088.1| 465|Homo sapiens LMNA protein protein. 31 5.1
BC014507-1|AAH14507.1| 664|Homo sapiens lamin A/C protein. 31 5.1
BC003162-1|AAH03162.1| 572|Homo sapiens lamin A/C protein. 31 5.1
BC000511-1|AAH00511.1| 572|Homo sapiens lamin A/C protein. 31 5.1
AY847597-1|AAW32540.1| 664|Homo sapiens lamin A/C transcript va... 31 5.1
AY847596-1|AAW32539.1| 480|Homo sapiens lamin A/C transcript va... 31 5.1
AY847595-1|AAW32538.1| 664|Homo sapiens lamin A/C transcript va... 31 5.1
AY528714-1|ABB04050.1| 487|Homo sapiens rhabdomyosarcoma antige... 31 5.1
AY357727-1|AAR29466.1| 614|Homo sapiens progerin protein. 31 5.1
AL135927-8|CAI15527.1| 491|Homo sapiens lamin A/C protein. 31 5.1
AL135927-7|CAI15526.1| 513|Homo sapiens lamin A/C protein. 31 5.1
AL135927-4|CAI15522.1| 664|Homo sapiens lamin A/C protein. 31 5.1
AL135927-3|CAI15523.1| 614|Homo sapiens lamin A/C protein. 31 5.1
AL135927-2|CAI15521.1| 572|Homo sapiens lamin A/C protein. 31 5.1
AL135927-1|CAI15520.1| 465|Homo sapiens lamin A/C protein. 31 5.1
>L01042-1|AAD54608.1| 1093|Homo sapiens TATA element modulatory factor
protein.
Length = 1093
Score = 60.1 bits (139), Expect = 7e-09
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = -2
Query: 608 LQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDELV 477
L+ L ++Y+ +LQMYGEK EE ELRLDL+DV +YK Q+DEL+
Sbjct: 1045 LRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELL 1088
>BC126123-1|AAI26124.1| 1093|Homo sapiens TATA element modulatory
factor 1 protein.
Length = 1093
Score = 60.1 bits (139), Expect = 7e-09
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = -2
Query: 608 LQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDELV 477
L+ L ++Y+ +LQMYGEK EE ELRLDL+DV +YK Q+DEL+
Sbjct: 1045 LRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELL 1088
>BC117418-1|AAI17419.1| 1093|Homo sapiens TATA element modulatory
factor 1 protein.
Length = 1093
Score = 60.1 bits (139), Expect = 7e-09
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = -2
Query: 608 LQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDELV 477
L+ L ++Y+ +LQMYGEK EE ELRLDL+DV +YK Q+DEL+
Sbjct: 1045 LRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELL 1088
>AB209109-1|BAD92346.1| 1096|Homo sapiens TATA element modulatory
factor 1 variant protein.
Length = 1096
Score = 60.1 bits (139), Expect = 7e-09
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = -2
Query: 608 LQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDELV 477
L+ L ++Y+ +LQMYGEK EE ELRLDL+DV +YK Q+DEL+
Sbjct: 1048 LRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELL 1091
>DQ444714-1|ABE01857.1| 805|Homo sapiens cenexin 1 protein.
Length = 805
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 253 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 301
>DQ444713-1|ABE01856.1| 824|Homo sapiens cenexin 1 variant 1
protein.
Length = 824
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 272 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 320
>BC091500-1|AAH91500.1| 829|Homo sapiens ODF2 protein protein.
Length = 829
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 277 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 325
>BC010629-1|AAH10629.1| 763|Homo sapiens outer dense fiber of sperm
tails 2 protein.
Length = 763
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 211 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 259
>AY366499-1|AAQ73195.1| 805|Homo sapiens outer dense fiber of sperm
tails 2 protein.
Length = 805
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 253 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 301
>AY319414-1|AAP83847.1| 657|Homo sapiens outer dense fiber of sperm
tails 2 isoform 3 protein.
Length = 657
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 277 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 325
>AL445287-6|CAH71069.1| 805|Homo sapiens outer dense fiber of sperm
tails 2 protein.
Length = 805
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 253 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 301
>AL445287-5|CAH71068.1| 765|Homo sapiens outer dense fiber of sperm
tails 2 protein.
Length = 765
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 272 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 320
>AL445287-4|CAH71067.1| 638|Homo sapiens outer dense fiber of sperm
tails 2 protein.
Length = 638
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 258 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 306
>AL445287-3|CAH71066.1| 701|Homo sapiens outer dense fiber of sperm
tails 2 protein.
Length = 701
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 321 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 369
>AL359091-23|CAI13506.1| 805|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 805
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 253 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 301
>AL359091-22|CAI13505.1| 765|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 765
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 272 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 320
>AL359091-17|CAI13500.1| 638|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 638
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 258 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 306
>AL359091-16|CAI13499.1| 701|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 701
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 321 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 369
>AF053970-1|AAC08409.1| 610|Homo sapiens outer dense fiber protein
2/2 protein.
Length = 610
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 230 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 278
>AF012549-1|AAB66337.1| 638|Homo sapiens outer dense fiber protein
2 protein.
Length = 638
Score = 34.3 bits (75), Expect = 0.42
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 626 QHALDDLQSLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLDEL 480
QH +D + L EQ ALL+ E + E A L L LQD ++ L E+
Sbjct: 258 QHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI 306
>X03445-1|CAA27174.1| 572|Homo sapiens protein ( Human mRNA for
nuclear envelope protein lamin C precursor. ).
Length = 572
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>X03444-1|CAA27173.1| 702|Homo sapiens protein ( Human mRNA for
nuclear envelope protein lamin A precursor. ).
Length = 702
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>M13452-1|AAA36160.1| 515|Homo sapiens protein ( Human lamin A
mRNA, 3'end. ).
Length = 515
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 171 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 215
>M13451-1|AAA36164.1| 572|Homo sapiens protein ( Human lamin C
mRNA, complete cds. ).
Length = 572
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>BC033088-1|AAH33088.1| 465|Homo sapiens LMNA protein protein.
Length = 465
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>BC014507-1|AAH14507.1| 664|Homo sapiens lamin A/C protein.
Length = 664
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>BC003162-1|AAH03162.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>BC000511-1|AAH00511.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>AY847597-1|AAW32540.1| 664|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 664
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>AY847596-1|AAW32539.1| 480|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 480
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>AY847595-1|AAW32538.1| 664|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 664
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>AY528714-1|ABB04050.1| 487|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.12 protein.
Length = 487
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>AY357727-1|AAR29466.1| 614|Homo sapiens progerin protein.
Length = 614
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>AL135927-8|CAI15527.1| 491|Homo sapiens lamin A/C protein.
Length = 491
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 239 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 283
>AL135927-7|CAI15526.1| 513|Homo sapiens lamin A/C protein.
Length = 513
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 261 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 305
>AL135927-4|CAI15522.1| 664|Homo sapiens lamin A/C protein.
Length = 664
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>AL135927-3|CAI15523.1| 614|Homo sapiens lamin A/C protein.
Length = 614
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>AL135927-2|CAI15521.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
>AL135927-1|CAI15520.1| 465|Homo sapiens lamin A/C protein.
Length = 465
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 617 LDDLQ-SLQEQYDALLQMYGEKEEELAELRLDLQDVTALYKQQLD 486
L DL+ SL + D ++ EKE E+AE+R +Q Y++ LD
Sbjct: 320 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 364
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,991,045
Number of Sequences: 237096
Number of extensions: 1087514
Number of successful extensions: 3291
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3283
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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