Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11m21
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007306-1|AAP35970.1| 174|Homo sapiens eukaryotic translation ... 65 3e-10
BC005291-1|AAH05291.1| 174|Homo sapiens eukaryotic translation ... 65 3e-10
AL451187-1|CAI14747.1| 174|Homo sapiens eukaryotic translation ... 65 3e-10
AL355499-1|CAH72539.1| 174|Homo sapiens eukaryotic translation ... 65 3e-10
AL023694-1|CAI21644.1| 174|Homo sapiens eukaryotic translation ... 65 3e-10
AB011079-1|BAA24926.1| 174|Homo sapiens p18 component of aminoa... 65 3e-10
BC126275-1|AAI26276.1| 1512|Homo sapiens EPRS protein protein. 35 0.31
BC105983-1|AAI05984.1| 975|Homo sapiens EPRS protein protein. 35 0.31
BC058921-1|AAH58921.1| 869|Homo sapiens EPRS protein protein. 35 0.31
BC046156-1|AAH46156.1| 328|Homo sapiens EPRS protein protein. 35 0.31
BC034797-1|AAH34797.1| 970|Homo sapiens EPRS protein protein. 35 0.31
BC015494-1|AAH15494.1| 328|Homo sapiens Unknown (protein for IM... 35 0.31
X54326-1|CAA38224.1| 1440|Homo sapiens glutaminyl-tRNA synthetas... 33 0.71
AY493416-1|AAS72877.1| 1440|Homo sapiens proliferation-inducing ... 33 0.71
U24169-1|AAC50391.1| 312|Homo sapiens JTV-1 protein. 30 6.6
BC013630-1|AAH13630.1| 320|Homo sapiens JTV1 gene protein. 30 6.6
BC010156-1|AAH10156.1| 320|Homo sapiens JTV1 gene protein. 30 6.6
BC002853-1|AAH02853.1| 320|Homo sapiens JTV1 gene protein. 30 6.6
AC005995-2|AAS00389.1| 320|Homo sapiens unknown protein. 30 6.6
BC011713-1|AAH11713.1| 448|Homo sapiens tRNA methyltransferase ... 30 8.8
BC003057-1|AAH03057.1| 375|Homo sapiens TRMT12 protein protein. 30 8.8
AK222727-1|BAD96447.1| 448|Homo sapiens hypothetical protein FL... 30 8.8
AK000779-1|BAA91374.1| 448|Homo sapiens protein ( Homo sapiens ... 30 8.8
>BT007306-1|AAP35970.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 64.9 bits (151), Expect = 3e-10
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Frame = -2
Query: 544 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 386
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 385 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 209
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 208 YPLLEHMSVAERDAFVHLCRWSKHIQAQPRV 116
+ + ++V E++ ++++ RW HIQ P +
Sbjct: 125 HRFIVDLTVQEKEKYLNVSRWFCHIQHYPGI 155
>BC005291-1|AAH05291.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 64.9 bits (151), Expect = 3e-10
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Frame = -2
Query: 544 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 386
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 385 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 209
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 208 YPLLEHMSVAERDAFVHLCRWSKHIQAQPRV 116
+ + ++V E++ ++++ RW HIQ P +
Sbjct: 125 HRFIVDLTVQEKEKYLNVSRWFCHIQHYPGI 155
>AL451187-1|CAI14747.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 64.9 bits (151), Expect = 3e-10
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Frame = -2
Query: 544 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 386
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 385 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 209
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 208 YPLLEHMSVAERDAFVHLCRWSKHIQAQPRV 116
+ + ++V E++ ++++ RW HIQ P +
Sbjct: 125 HRFIVDLTVQEKEKYLNVSRWFCHIQHYPGI 155
>AL355499-1|CAH72539.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 64.9 bits (151), Expect = 3e-10
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Frame = -2
Query: 544 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 386
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 385 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 209
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 208 YPLLEHMSVAERDAFVHLCRWSKHIQAQPRV 116
+ + ++V E++ ++++ RW HIQ P +
Sbjct: 125 HRFIVDLTVQEKEKYLNVSRWFCHIQHYPGI 155
>AL023694-1|CAI21644.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 64.9 bits (151), Expect = 3e-10
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Frame = -2
Query: 544 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 386
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 385 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 209
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 208 YPLLEHMSVAERDAFVHLCRWSKHIQAQPRV 116
+ + ++V E++ ++++ RW HIQ P +
Sbjct: 125 HRFIVDLTVQEKEKYLNVSRWFCHIQHYPGI 155
>AB011079-1|BAA24926.1| 174|Homo sapiens p18 component of
aminoacyl-tRNA synthetase complex protein.
Length = 174
Score = 64.9 bits (151), Expect = 3e-10
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Frame = -2
Query: 544 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKN---VEGFVTIILSMVSKCGT----ASSEE 386
+ ++ K L +S G + VL+ N + G TI +V + S+ E
Sbjct: 7 LSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYLLGSTAE 66
Query: 385 QRLLTYQWLEY-ISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIV 209
++ + QWLEY ++ + N L+++N L+ YLTG T+AD+ LYY +
Sbjct: 67 EKAIVQQWLEYRVTQVDGHSSKNDIHTL--LKDLNSYLEDKVYLTGYNFTLADILLYYGL 124
Query: 208 YPLLEHMSVAERDAFVHLCRWSKHIQAQPRV 116
+ + ++V E++ ++++ RW HIQ P +
Sbjct: 125 HRFIVDLTVQEKEKYLNVSRWFCHIQHYPGI 155
>BC126275-1|AAI26276.1| 1512|Homo sapiens EPRS protein protein.
Length = 1512
Score = 34.7 bits (76), Expect = 0.31
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = -2
Query: 469 VLENKNVEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQE 290
V EN +I+ + TA L+ + +++ FS +++ + E
Sbjct: 42 VSENVIFTDVNSILRYLARVATTAGLYGSNLMEHTEIDHWLEFSATKLSSCDSFTSTINE 101
Query: 289 INRALQSNTYLTGQFLTIADVALYYIVY-PLLEHMSVAERDAFVHLCRWSKHIQAQ 125
+N L TYL G L++AD+ ++ + + ++ A VH+ RW ++AQ
Sbjct: 102 LNHCLSLRTYLVGNSLSLADLCVWATLKGNAAWQEQLKQKKAPVHVKRWFGFLEAQ 157
>BC105983-1|AAI05984.1| 975|Homo sapiens EPRS protein protein.
Length = 975
Score = 34.7 bits (76), Expect = 0.31
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = -2
Query: 469 VLENKNVEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQE 290
V EN +I+ + TA L+ + +++ FS +++ + E
Sbjct: 42 VSENVIFTDVNSILRYLARVATTAGLYGSNLMEHTEIDHWLEFSATKLSSCDSFTSTINE 101
Query: 289 INRALQSNTYLTGQFLTIADVALYYIVY-PLLEHMSVAERDAFVHLCRWSKHIQAQ 125
+N L TYL G L++AD+ ++ + + ++ A VH+ RW ++AQ
Sbjct: 102 LNHCLSLRTYLVGNSLSLADLCVWATLKGNAAWQEQLKQKKAPVHVKRWFGFLEAQ 157
>BC058921-1|AAH58921.1| 869|Homo sapiens EPRS protein protein.
Length = 869
Score = 34.7 bits (76), Expect = 0.31
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = -2
Query: 469 VLENKNVEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQE 290
V EN +I+ + TA L+ + +++ FS +++ + E
Sbjct: 42 VSENVIFTDVNSILRYLARVATTAGLYGSNLMEHTEIDHWLEFSATKLSSCDSFTSTINE 101
Query: 289 INRALQSNTYLTGQFLTIADVALYYIVY-PLLEHMSVAERDAFVHLCRWSKHIQAQ 125
+N L TYL G L++AD+ ++ + + ++ A VH+ RW ++AQ
Sbjct: 102 LNHCLSLRTYLVGNSLSLADLCVWATLKGNAAWQEQLKQKKAPVHVKRWFGFLEAQ 157
>BC046156-1|AAH46156.1| 328|Homo sapiens EPRS protein protein.
Length = 328
Score = 34.7 bits (76), Expect = 0.31
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = -2
Query: 469 VLENKNVEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQE 290
V EN +I+ + TA L+ + +++ FS +++ + E
Sbjct: 42 VSENVIFTDVNSILRYLARVATTAGLYGSNLMEHTEIDHWLEFSATKLSSCDSFTSTINE 101
Query: 289 INRALQSNTYLTGQFLTIADVALYYIVY-PLLEHMSVAERDAFVHLCRWSKHIQAQ 125
+N L TYL G L++AD+ ++ + + ++ A VH+ RW ++AQ
Sbjct: 102 LNHCLSLRTYLVGNSLSLADLCVWATLKGNAAWQEQLKQKKAPVHVKRWFGFLEAQ 157
>BC034797-1|AAH34797.1| 970|Homo sapiens EPRS protein protein.
Length = 970
Score = 34.7 bits (76), Expect = 0.31
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = -2
Query: 469 VLENKNVEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQE 290
V EN +I+ + TA L+ + +++ FS +++ + E
Sbjct: 42 VSENVIFTDVNSILRYLARVATTAGLYGSNLMEHTEIDHWLEFSATKLSSCDSFTSTINE 101
Query: 289 INRALQSNTYLTGQFLTIADVALYYIVY-PLLEHMSVAERDAFVHLCRWSKHIQAQ 125
+N L TYL G L++AD+ ++ + + ++ A VH+ RW ++AQ
Sbjct: 102 LNHCLSLRTYLVGNSLSLADLCVWATLKGNAAWQEQLKQKKAPVHVKRWFGFLEAQ 157
>BC015494-1|AAH15494.1| 328|Homo sapiens Unknown (protein for
IMAGE:3887698) protein.
Length = 328
Score = 34.7 bits (76), Expect = 0.31
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = -2
Query: 469 VLENKNVEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQE 290
V EN +I+ + TA L+ + +++ FS +++ + E
Sbjct: 42 VSENVIFTDVNSILRYLARVATTAGLYGSNLMEHTEIDHWLEFSATKLSSCDSFTSTINE 101
Query: 289 INRALQSNTYLTGQFLTIADVALYYIVY-PLLEHMSVAERDAFVHLCRWSKHIQAQ 125
+N L TYL G L++AD+ ++ + + ++ A VH+ RW ++AQ
Sbjct: 102 LNHCLSLRTYLVGNSLSLADLCVWATLKGNAAWQEQLKQKKAPVHVKRWFGFLEAQ 157
>X54326-1|CAA38224.1| 1440|Homo sapiens glutaminyl-tRNA synthetase
protein.
Length = 1440
Score = 33.5 bits (73), Expect = 0.71
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -2
Query: 364 WLEYISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIVY-PLLEHM 188
WLE FS +++ + E+N L TYL G L++AD+ ++ +
Sbjct: 9 WLE----FSATKLSSCDSFTSTINELNHCLSLRTYLVGNSLSLADLCVWATLKGNAAWQE 64
Query: 187 SVAERDAFVHLCRWSKHIQAQ 125
+ ++ A VH+ RW ++AQ
Sbjct: 65 QLKQKKAPVHVKRWFGFLEAQ 85
>AY493416-1|AAS72877.1| 1440|Homo sapiens proliferation-inducing
protein 32 protein.
Length = 1440
Score = 33.5 bits (73), Expect = 0.71
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -2
Query: 364 WLEYISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFLTIADVALYYIVY-PLLEHM 188
WLE FS +++ + E+N L TYL G L++AD+ ++ +
Sbjct: 9 WLE----FSATKLSSCDSFTSTINELNHCLSLRTYLVGNSLSLADLCVWATLKGNAAWQE 64
Query: 187 SVAERDAFVHLCRWSKHIQAQ 125
+ ++ A VH+ RW ++AQ
Sbjct: 65 QLKQKKAPVHVKRWFGFLEAQ 85
>U24169-1|AAC50391.1| 312|Homo sapiens JTV-1 protein.
Length = 312
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -2
Query: 451 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 272
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 271 SNTYLTGQFLTIADVALYYIV 209
+ +L G LT+ADV L+ ++
Sbjct: 265 KSPWLAGNELTVADVVLWSVL 285
>BC013630-1|AAH13630.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -2
Query: 451 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 272
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 271 SNTYLTGQFLTIADVALYYIV 209
+ +L G LT+ADV L+ ++
Sbjct: 265 KSPWLAGNELTVADVVLWSVL 285
>BC010156-1|AAH10156.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -2
Query: 451 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 272
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 271 SNTYLTGQFLTIADVALYYIV 209
+ +L G LT+ADV L+ ++
Sbjct: 265 KSPWLAGNELTVADVVLWSVL 285
>BC002853-1|AAH02853.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -2
Query: 451 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 272
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 271 SNTYLTGQFLTIADVALYYIV 209
+ +L G LT+ADV L+ ++
Sbjct: 265 KSPWLAGNELTVADVVLWSVL 285
>AC005995-2|AAS00389.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = -2
Query: 451 VEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAFKFLQEINRALQ 272
+EG I + S G + L W++ I++F + ++ A F + +N AL
Sbjct: 207 IEGEGNIARFLFSLFGQKHNAVNATLIDSWVD-IAIFQLKEGSSKEKAAVF-RSMNSALG 264
Query: 271 SNTYLTGQFLTIADVALYYIV 209
+ +L G LT+ADV L+ ++
Sbjct: 265 KSPWLAGNELTVADVVLWSVL 285
>BC011713-1|AAH11713.1| 448|Homo sapiens tRNA methyltransferase 12
homolog (S. cerevisiae) protein.
Length = 448
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Frame = -2
Query: 418 VSKCGTASSEEQRLL-TYQWLEYISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFL 242
VS GT + LL + W+E++ + F F + ++ G+ L
Sbjct: 179 VSPDGTRTPAVTLLLGDHGWVEHVDNGIRYKFDVTQCMFSFGNITEKLRVASLSCAGEVL 238
Query: 241 TIADVALYYIVYPLLEHMSVAERDAFVHLCRWSKH 137
+ Y P L H A FVH C W+ H
Sbjct: 239 VDLYAGIGYFTLPFLVHAGAA----FVHACEWNPH 269
>BC003057-1|AAH03057.1| 375|Homo sapiens TRMT12 protein protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Frame = -2
Query: 418 VSKCGTASSEEQRLL-TYQWLEYISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFL 242
VS GT + LL + W+E++ + F F + ++ G+ L
Sbjct: 179 VSPDGTRTPAVTLLLGDHGWVEHVDNGIRYKFDVTQCMFSFGNITEKLRVASLSCAGEVL 238
Query: 241 TIADVALYYIVYPLLEHMSVAERDAFVHLCRWSKH 137
+ Y P L H A FVH C W+ H
Sbjct: 239 VDLYAGIGYFTLPFLVHAGAA----FVHACEWNPH 269
>AK222727-1|BAD96447.1| 448|Homo sapiens hypothetical protein
FLJ20772 variant protein.
Length = 448
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Frame = -2
Query: 418 VSKCGTASSEEQRLL-TYQWLEYISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFL 242
VS GT + LL + W+E++ + F F + ++ G+ L
Sbjct: 179 VSPDGTRTPAVTLLLGDHGWVEHVDNGIRYKFDVTQCMFSFGNITEKLRVASLSCAGEVL 238
Query: 241 TIADVALYYIVYPLLEHMSVAERDAFVHLCRWSKH 137
+ Y P L H A FVH C W+ H
Sbjct: 239 VDLYAGIGYFTLPFLVHAGAA----FVHACEWNPH 269
>AK000779-1|BAA91374.1| 448|Homo sapiens protein ( Homo sapiens
cDNA FLJ20772 fis, clone COL06053. ).
Length = 448
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Frame = -2
Query: 418 VSKCGTASSEEQRLL-TYQWLEYISMFSNQAVANSTFAFKFLQEINRALQSNTYLTGQFL 242
VS GT + LL + W+E++ + F F + ++ G+ L
Sbjct: 179 VSPDGTRTPAVTLLLGDHGWVEHVDNGIRYKFDVTQCMFSFGNITEKLRVASLSCAGEVL 238
Query: 241 TIADVALYYIVYPLLEHMSVAERDAFVHLCRWSKH 137
+ Y P L H A FVH C W+ H
Sbjct: 239 VDLYAGIGYFTLPFLVHAGAA----FVHACEWNPH 269
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,147,137
Number of Sequences: 237096
Number of extensions: 2018995
Number of successful extensions: 3198
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3192
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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