Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11m18
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006140-1|AAH06140.1| 217|Homo sapiens HYI protein protein. 136 9e-32
AL583862-6|CAI14891.1| 229|Homo sapiens hydroxypyruvate isomera... 135 1e-31
AL583862-5|CAI14890.1| 204|Homo sapiens hydroxypyruvate isomera... 135 1e-31
AF284750-1|AAG59852.1| 204|Homo sapiens HT036-ISO protein. 135 1e-31
BC019041-1|AAH19041.1| 174|Homo sapiens HYI protein protein. 114 2e-25
AL583862-8|CAI14893.1| 247|Homo sapiens hydroxypyruvate isomera... 114 2e-25
AL583862-7|CAI14892.1| 165|Homo sapiens hydroxypyruvate isomera... 114 2e-25
AL583862-4|CAI14889.1| 180|Homo sapiens hydroxypyruvate isomera... 114 2e-25
AF284751-1|AAG59853.1| 174|Homo sapiens HT036 protein. 114 2e-25
AY775560-1|AAV84474.1| 229|Homo sapiens endothelial cell apopto... 83 6e-16
>BC006140-1|AAH06140.1| 217|Homo sapiens HYI protein protein.
Length = 217
Score = 136 bits (328), Expect = 9e-32
Identities = 61/134 (45%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = -3
Query: 662 LLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 486
L +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q
Sbjct: 60 LRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQI 119
Query: 485 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 306
+ G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG EY+
Sbjct: 120 MDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLENEGYKGFVGCEYQP 179
Query: 305 IGNTKDGLTWINNY 264
G+T +GL+W+ +Y
Sbjct: 180 RGDTVEGLSWLRSY 193
>AL583862-6|CAI14891.1| 229|Homo sapiens hydroxypyruvate isomerase
homolog (E. coli) protein.
Length = 229
Score = 135 bits (327), Expect = 1e-31
Identities = 61/134 (45%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = -3
Query: 662 LLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 486
L +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q
Sbjct: 85 LRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQI 144
Query: 485 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 306
+ G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG EY+
Sbjct: 145 MDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVGCEYQP 204
Query: 305 IGNTKDGLTWINNY 264
G+T +GL+W+ +Y
Sbjct: 205 RGDTVEGLSWLRSY 218
>AL583862-5|CAI14890.1| 204|Homo sapiens hydroxypyruvate isomerase
homolog (E. coli) protein.
Length = 204
Score = 135 bits (327), Expect = 1e-31
Identities = 61/134 (45%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = -3
Query: 662 LLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 486
L +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q
Sbjct: 60 LRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQI 119
Query: 485 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 306
+ G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG EY+
Sbjct: 120 MDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVGCEYQP 179
Query: 305 IGNTKDGLTWINNY 264
G+T +GL+W+ +Y
Sbjct: 180 RGDTVEGLSWLRSY 193
>AF284750-1|AAG59852.1| 204|Homo sapiens HT036-ISO protein.
Length = 204
Score = 135 bits (327), Expect = 1e-31
Identities = 61/134 (45%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = -3
Query: 662 LLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 486
L +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q
Sbjct: 60 LRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQI 119
Query: 485 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKA 306
+ G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG EY+
Sbjct: 120 MDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVGCEYQP 179
Query: 305 IGNTKDGLTWINNY 264
G+T +GL+W+ +Y
Sbjct: 180 RGDTVEGLSWLRSY 193
>BC019041-1|AAH19041.1| 174|Homo sapiens HYI protein protein.
Length = 174
Score = 114 bits (275), Expect = 2e-25
Identities = 53/115 (46%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Frame = -3
Query: 662 LLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 486
L +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q
Sbjct: 60 LRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQI 119
Query: 485 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 321
+ G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG
Sbjct: 120 MDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 174
>AL583862-8|CAI14893.1| 247|Homo sapiens hydroxypyruvate isomerase
homolog (E. coli) protein.
Length = 247
Score = 114 bits (275), Expect = 2e-25
Identities = 53/115 (46%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Frame = -3
Query: 662 LLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 486
L +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q
Sbjct: 133 LRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQI 192
Query: 485 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 321
+ G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG
Sbjct: 193 MDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 247
>AL583862-7|CAI14892.1| 165|Homo sapiens hydroxypyruvate isomerase
homolog (E. coli) protein.
Length = 165
Score = 114 bits (275), Expect = 2e-25
Identities = 53/115 (46%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Frame = -3
Query: 662 LLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 486
L +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q
Sbjct: 51 LRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQI 110
Query: 485 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 321
+ G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG
Sbjct: 111 MDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 165
>AL583862-4|CAI14889.1| 180|Homo sapiens hydroxypyruvate isomerase
homolog (E. coli) protein.
Length = 180
Score = 114 bits (275), Expect = 2e-25
Identities = 53/115 (46%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Frame = -3
Query: 662 LLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 486
L +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q
Sbjct: 66 LRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQI 125
Query: 485 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 321
+ G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG
Sbjct: 126 MDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 180
>AF284751-1|AAG59853.1| 174|Homo sapiens HT036 protein.
Length = 174
Score = 114 bits (275), Expect = 2e-25
Identities = 53/115 (46%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Frame = -3
Query: 662 LLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 486
L +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q
Sbjct: 60 LRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQI 119
Query: 485 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 321
+ G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L GY +VG
Sbjct: 120 MDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 174
>AY775560-1|AAV84474.1| 229|Homo sapiens endothelial cell apoptosis
protein E-CE1 protein.
Length = 229
Score = 83.4 bits (197), Expect = 6e-16
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = -3
Query: 662 LLYAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 486
L +A VL E++ GL+EPIN + + P+YFL +A I++++ PNL+L +DIFH Q
Sbjct: 133 LRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQI 192
Query: 485 IAGDITHNITKLLPYIGHVQIAQVPN-RNEPDTPG 384
+ G++T NI + LP +GHVQ+AQ P R PG
Sbjct: 193 MDGNLTGNIREFLPIVGHVQVAQGPRPRGAQQAPG 227
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,813,384
Number of Sequences: 237096
Number of extensions: 1740910
Number of successful extensions: 3087
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3077
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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