Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11m01
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U75296-1|AAC50966.1| 485|Homo sapiens fatty aldehyde dehydrogen... 31 2.4
U75295-1|AAC50965.1| 508|Homo sapiens fatty aldehyde dehydrogen... 31 2.4
U46689-1|AAC51121.1| 485|Homo sapiens aldehyde dehydrogenase pr... 31 2.4
L47162-1|AAB01003.1| 485|Homo sapiens fatty aldehyde dehydrogen... 31 2.4
CR457422-1|CAG33703.1| 485|Homo sapiens ALDH3A2 protein. 31 2.4
BC002430-1|AAH02430.1| 508|Homo sapiens aldehyde dehydrogenase ... 31 2.4
AB208894-1|BAD92131.1| 461|Homo sapiens aldehyde dehydrogenase ... 31 2.4
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein. 30 5.6
AF273044-1|AAG34904.1| 761|Homo sapiens CTCL tumor antigen se2-... 30 5.6
AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein. 30 5.6
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 29 9.9
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 29 9.9
AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein. 29 9.9
>U75296-1|AAC50966.1| 485|Homo sapiens fatty aldehyde dehydrogenase
protein.
Length = 485
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 123 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 16
+ID +E+ + V KK VLT +DE YI P+ L
Sbjct: 67 EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102
>U75295-1|AAC50965.1| 508|Homo sapiens fatty aldehyde dehydrogenase
protein.
Length = 508
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 123 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 16
+ID +E+ + V KK VLT +DE YI P+ L
Sbjct: 67 EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102
>U46689-1|AAC51121.1| 485|Homo sapiens aldehyde dehydrogenase
protein.
Length = 485
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 123 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 16
+ID +E+ + V KK VLT +DE YI P+ L
Sbjct: 67 EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102
>L47162-1|AAB01003.1| 485|Homo sapiens fatty aldehyde dehydrogenase
protein.
Length = 485
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 123 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 16
+ID +E+ + V KK VLT +DE YI P+ L
Sbjct: 67 EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102
>CR457422-1|CAG33703.1| 485|Homo sapiens ALDH3A2 protein.
Length = 485
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 123 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 16
+ID +E+ + V KK VLT +DE YI P+ L
Sbjct: 67 EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102
>BC002430-1|AAH02430.1| 508|Homo sapiens aldehyde dehydrogenase 3
family, member A2 protein.
Length = 508
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 123 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 16
+ID +E+ + V KK VLT +DE YI P+ L
Sbjct: 67 EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102
>AB208894-1|BAD92131.1| 461|Homo sapiens aldehyde dehydrogenase 3A2
variant protein.
Length = 461
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 123 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 16
+ID +E+ + V KK VLT +DE YI P+ L
Sbjct: 43 EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 78
>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
Length = 2479
Score = 30.3 bits (65), Expect = 5.6
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = -2
Query: 393 SLLAKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQSHRL 214
+LL E + T + + SLTDN+ + N+ Q+K A K IL EK ++++++ L
Sbjct: 1797 NLLKLKEALKTSKNRENSLTDNLNDLNNELQKKQKAYNK---ILREKE---EIDQENDEL 1850
Query: 213 DR-VKRVXXXXXXXXXXXXXXXXLWFFENE-EKIDLQIEDKEKLVDKTQTKKK 61
R +KR+ + + + +K++ Q+E K + VD K+K
Sbjct: 1851 KRQIKRLTSGLQGKPLTDNKQSLIEELQRKVKKLENQLEGKVEEVDLKPMKEK 1903
>AF273044-1|AAG34904.1| 761|Homo sapiens CTCL tumor antigen se2-2
protein.
Length = 761
Score = 30.3 bits (65), Expect = 5.6
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = -2
Query: 393 SLLAKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQSHRL 214
+LL E + T + + SLTDN+ + N+ Q+K A K IL EK ++++++ L
Sbjct: 172 NLLKLKEALKTSKNRENSLTDNLNDLNNELQKKQKAYNK---ILREKE---EIDQENDEL 225
Query: 213 DR-VKRVXXXXXXXXXXXXXXXXLWFFENE-EKIDLQIEDKEKLVDKTQTKKK 61
R +KR+ + + + +K++ Q+E K + VD K+K
Sbjct: 226 KRQIKRLTSGLQGKPLTDNKQSLIEELQRKVKKLENQLEGKVEEVDLKPMKEK 278
>AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.
Length = 1540
Score = 30.3 bits (65), Expect = 5.6
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = -2
Query: 393 SLLAKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQSHRL 214
+LL E + T + + SLTDN+ + N+ Q+K A K IL EK ++++++ L
Sbjct: 858 NLLKLKEALKTSKNRENSLTDNLNDLNNELQKKQKAYNK---ILREKE---EIDQENDEL 911
Query: 213 DR-VKRVXXXXXXXXXXXXXXXXLWFFENE-EKIDLQIEDKEKLVDKTQTKKK 61
R +KR+ + + + +K++ Q+E K + VD K+K
Sbjct: 912 KRQIKRLTSGLQGKPLTDNKQSLIEELQRKVKKLENQLEGKVEEVDLKPMKEK 964
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -2
Query: 363 TKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQ 244
TK L+ + +N+ + +NK+QE +V+ QKE L E RQ
Sbjct: 577 TKQKLEDKV-ENLVDQLNKSQESNVSIQKENLELKEHIRQ 615
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -2
Query: 363 TKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQ 244
TK L+ + +N+ + +NK+QE +V+ QKE L E RQ
Sbjct: 292 TKQKLEDKV-ENLVDQLNKSQESNVSIQKENLELKEHIRQ 330
>AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.
Length = 1978
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -2
Query: 363 TKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQ 244
TK L+ + +N+ + +NK+QE +V+ QKE L E RQ
Sbjct: 577 TKQKLEDKV-ENLVDQLNKSQESNVSIQKENLELKEHIRQ 615
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,610,878
Number of Sequences: 237096
Number of extensions: 1088625
Number of successful extensions: 2554
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2554
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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