Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt11l02
         (674 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U86264-1|AAC39627.1|  216|Homo sapiens olfactory receptor protein.     31   3.7  
Y14442-1|CAA74794.1|  312|Homo sapiens olfactory receptor protei...    31   4.9  
U86239-1|AAC39619.1|  216|Homo sapiens olfactory receptor protein.     31   4.9  
U86236-1|AAC39616.1|  216|Homo sapiens olfactory receptor protein.     31   4.9  
U86234-1|AAC39614.1|  216|Homo sapiens olfactory receptor protein.     31   4.9  
BC069335-1|AAH69335.1|  312|Homo sapiens olfactory receptor, fam...    31   4.9  
AJ003147-2|CAA05903.1|  312|Homo sapiens olfactory receptor prot...    31   4.9  
AF399559-1|AAK95044.1|  216|Homo sapiens olfactory receptor prot...    31   4.9  
AB065907-1|BAC06122.1|  312|Homo sapiens seven transmembrane hel...    31   4.9  
U86235-1|AAC39615.1|  216|Homo sapiens olfactory receptor protein.     30   6.5  

>U86264-1|AAC39627.1|  216|Homo sapiens olfactory receptor protein.
          Length = 216

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 224 CIVLNIYIFFFLAPNSTILQALAY*HSELAFLSVCSN-YFSVSYNHKKSVCA*LLS--FI 394
           C+    ++F F+  ++ +L  +AY H    F++VC   +++    H+  +CA L++  ++
Sbjct: 30  CLTQMYFVFMFVDTDNFLLAVMAYDH----FVAVCHPLHYTAKMTHQ--LCALLVAGLWV 83

Query: 395 TLTISTMLHSLL 430
              ++ +LH+LL
Sbjct: 84  VANLNVLLHTLL 95


>Y14442-1|CAA74794.1|  312|Homo sapiens olfactory receptor protein
           protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 224 CIVLNIYIFFFLAPNSTILQALAY*HSELAFLSVCSN-YFSVSYNHKKSVCA*LLS--FI 394
           C+    ++F F+  ++ +L  +AY H    F++VC   +++    H+  +CA L++  ++
Sbjct: 97  CLTQMYFVFMFVDMDNFLLAVMAYDH----FVAVCHPLHYTAKMTHQ--LCALLVAGLWV 150

Query: 395 TLTISTMLHSLL 430
              ++ +LH+LL
Sbjct: 151 VANLNVLLHTLL 162


>U86239-1|AAC39619.1|  216|Homo sapiens olfactory receptor protein.
          Length = 216

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 224 CIVLNIYIFFFLAPNSTILQALAY*HSELAFLSVCSN-YFSVSYNHKKSVCA*LLS--FI 394
           C+    ++F F+  ++ +L  +AY H    F++VC   +++    H+  +CA L++  ++
Sbjct: 30  CLTQMYFVFMFVDMDNFLLAVMAYDH----FVAVCHPLHYTAKVTHQ--LCALLVAGLWV 83

Query: 395 TLTISTMLHSLL 430
              ++ +LH+LL
Sbjct: 84  VANLNVLLHTLL 95


>U86236-1|AAC39616.1|  216|Homo sapiens olfactory receptor protein.
          Length = 216

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 224 CIVLNIYIFFFLAPNSTILQALAY*HSELAFLSVCSN-YFSVSYNHKKSVCA*LLS--FI 394
           C+    ++F F+  ++ +L  +AY H    F++VC   +++    H+  +CA L++  ++
Sbjct: 30  CLTQMYFVFMFVDMDNFLLAVMAYDH----FVAVCHPLHYTAKMTHQ--LCALLVAGLWV 83

Query: 395 TLTISTMLHSLL 430
              ++ +LH+LL
Sbjct: 84  VANLNVLLHTLL 95


>U86234-1|AAC39614.1|  216|Homo sapiens olfactory receptor protein.
          Length = 216

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 224 CIVLNIYIFFFLAPNSTILQALAY*HSELAFLSVCSN-YFSVSYNHKKSVCA*LLS--FI 394
           C+    ++F F+  ++ +L  +AY H    F++VC   +++    H+  +CA L++  ++
Sbjct: 30  CLTQMYFVFMFVDMDNFLLAVMAYDH----FVAVCHPLHYTAKMTHQ--LCALLVAGLWV 83

Query: 395 TLTISTMLHSLL 430
              ++ +LH+LL
Sbjct: 84  VANLNVLLHTLL 95


>BC069335-1|AAH69335.1|  312|Homo sapiens olfactory receptor, family
           1, subfamily F, member 1 protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 224 CIVLNIYIFFFLAPNSTILQALAY*HSELAFLSVCSN-YFSVSYNHKKSVCA*LLS--FI 394
           C+    ++F F+  ++ +L  +AY H    F++VC   +++    H+  +CA L++  ++
Sbjct: 97  CLTQMYFVFMFVDMDNFLLAVMAYDH----FVAVCHPLHYTAKMTHQ--LCALLVAGLWV 150

Query: 395 TLTISTMLHSLL 430
              ++ +LH+LL
Sbjct: 151 VANLNVLLHTLL 162


>AJ003147-2|CAA05903.1|  312|Homo sapiens olfactory receptor
           protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 224 CIVLNIYIFFFLAPNSTILQALAY*HSELAFLSVCSN-YFSVSYNHKKSVCA*LLS--FI 394
           C+    ++F F+  ++ +L  +AY H    F++VC   +++    H+  +CA L++  ++
Sbjct: 97  CLTQMYFVFMFVDMDNFLLAVMAYDH----FVAVCHPLHYTAKMTHQ--LCALLVAGLWV 150

Query: 395 TLTISTMLHSLL 430
              ++ +LH+LL
Sbjct: 151 VANLNVLLHTLL 162


>AF399559-1|AAK95044.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 224 CIVLNIYIFFFLAPNSTILQALAY*HSELAFLSVCSN-YFSVSYNHKKSVCA*LLS--FI 394
           C+    ++F F+  ++ +L  +AY H    F++VC   +++    H+  +CA L++  ++
Sbjct: 30  CLTQMYFVFMFVDMDNFLLAVMAYDH----FVAVCHPLHYTAKMTHQ--LCALLVAGLWV 83

Query: 395 TLTISTMLHSLL 430
              ++ +LH+LL
Sbjct: 84  VANLNVLLHTLL 95


>AB065907-1|BAC06122.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 224 CIVLNIYIFFFLAPNSTILQALAY*HSELAFLSVCSN-YFSVSYNHKKSVCA*LLS--FI 394
           C+    ++F F+  ++ +L  +AY H    F++VC   +++    H+  +CA L++  ++
Sbjct: 97  CLTQMYFVFMFVDMDNFLLAVMAYDH----FVAVCHPLHYTAKMTHQ--LCALLVAGLWV 150

Query: 395 TLTISTMLHSLL 430
              ++ +LH+LL
Sbjct: 151 VANLNVLLHTLL 162


>U86235-1|AAC39615.1|  216|Homo sapiens olfactory receptor protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 18/72 (25%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +2

Query: 224 CIVLNIYIFFFLAPNSTILQALAY*HSELAFLSVCSN-YFSVSYNHKKSVCA*LLS--FI 394
           C+    ++F F+  ++ +L  +AY H    F++VC   +++    H+  +CA L++  ++
Sbjct: 30  CLTQMYFVFMFVDMDNFLLAVMAYDH----FVAVCHPLHYTARMTHQ--LCALLVAGLWV 83

Query: 395 TLTISTMLHSLL 430
              ++ +LH+LL
Sbjct: 84  VANLNVLLHTLL 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,401,898
Number of Sequences: 237096
Number of extensions: 1372617
Number of successful extensions: 1317
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)