Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt11k05
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130312-1|AAI30313.1|  281|Homo sapiens ELOVL family member 7, ...    30   7.0  
BC130310-1|AAI30311.1|  281|Homo sapiens ELOVL family member 7, ...    30   7.0  
AB181393-1|BAD93238.1|  281|Homo sapiens ELOVL7 protein.               30   7.0  

>BC130312-1|AAI30313.1|  281|Homo sapiens ELOVL family member 7,
           elongation of long chain fatty acids (yeast) protein.
          Length = 281

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 549 CQLYYFI*LIEMTIVVQKVMSKKKQRTQPLYI*GLSILPW 668
           C LYYF   IE+   +  V+ KK  +   L++   +I+PW
Sbjct: 117 CWLYYFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPW 156


>BC130310-1|AAI30311.1|  281|Homo sapiens ELOVL family member 7,
           elongation of long chain fatty acids (yeast) protein.
          Length = 281

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 549 CQLYYFI*LIEMTIVVQKVMSKKKQRTQPLYI*GLSILPW 668
           C LYYF   IE+   +  V+ KK  +   L++   +I+PW
Sbjct: 117 CWLYYFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPW 156


>AB181393-1|BAD93238.1|  281|Homo sapiens ELOVL7 protein.
          Length = 281

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 549 CQLYYFI*LIEMTIVVQKVMSKKKQRTQPLYI*GLSILPW 668
           C LYYF   IE+   +  V+ KK  +   L++   +I+PW
Sbjct: 117 CWLYYFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPW 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,291,628
Number of Sequences: 237096
Number of extensions: 1391952
Number of successful extensions: 1889
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1889
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)