Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11j05
(791 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 26 0.46
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 26 0.46
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 26 0.46
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 26 0.46
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 4.3
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 23 4.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.7
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 9.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.9
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.46
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 532 NYIIYNNSRCCNNSFGTHRYLIINYFR*HLLPLKTRLH 645
NY YNN+ NN++ +Y INY +P+ ++
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 427 NWIIYNHSRCCNNSFGTHRYLIINY 501
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.46
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 532 NYIIYNNSRCCNNSFGTHRYLIINYFR*HLLPLKTRLH 645
NY YNN+ NN++ +Y INY +P+ ++
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 427 NWIIYNHSRCCNNSFGTHRYLIINY 501
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.46
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 532 NYIIYNNSRCCNNSFGTHRYLIINYFR*HLLPLKTRLH 645
NY YNN+ NN++ +Y INY +P+ ++
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 427 NWIIYNHSRCCNNSFGTHRYLIINY 501
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.46
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 532 NYIIYNNSRCCNNSFGTHRYLIINYFR*HLLPLKTRLH 645
NY YNN+ NN++ +Y INY +P+ ++
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 427 NWIIYNHSRCCNNSFGTHRYLIINY 501
N+ YN++ NN++ +Y INY
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 532 NYIIYNNSRCCNNSFGTHRYLIINY 606
N I+NN+ NN++ + Y NY
Sbjct: 87 NKTIHNNNNYNNNNYNNYNYNNNNY 111
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 67 FLLRFDFNQSCSGFCSDSFYGFRFNNHNF 153
F L +++ + S YGF FN+ NF
Sbjct: 369 FPLEYEYVLAVSNRIQKVIYGFDFNDVNF 397
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 532 NYIIYNNSRCCNNSFGTHR--YLIINYFR*HLLPLKTRLH 645
N I+NN+ NN++ ++ Y INY +P+ ++
Sbjct: 87 NKTIHNNNNYNNNNYNNYKKLYYNINYIEQVPVPIPVPIY 126
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 532 NYIIYNNSRCCNNSFGTHRYLIINY 606
NY YNN N++ Y INY
Sbjct: 90 NYSNYNNYNNNYNNYNKKLYYNINY 114
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +1
Query: 427 NWIIYNHSRCCNNSFGTHRYLI 492
N ++YNH+R + + YL+
Sbjct: 217 NLLLYNHARLMSQDNHSKEYLV 238
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,688
Number of Sequences: 438
Number of extensions: 3670
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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