Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11i19
(175 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 0.78
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 0.78
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 0.78
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 0.78
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 0.78
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 0.78
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 0.78
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 0.78
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 0.78
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 0.78
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 1.0
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 1.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 1.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 1.8
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 20 2.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 2.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 3.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 20 3.2
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 19 4.2
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 19 5.5
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 18 9.6
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 18 9.6
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 18 9.6
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 18 9.6
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 18 9.6
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 18 9.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 18 9.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 18 9.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 18 9.6
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 18 9.6
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 18 9.6
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 0.78
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 0.78
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 0.78
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 0.78
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 0.78
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 0.78
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 0.78
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 0.78
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 0.78
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNY 339
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 0.78
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNY 339
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.0
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 116 ICSTDRLIFDTQTYSKIYNRYEKKNF 39
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNPLSNNYNYNNNYNNYNKHNY 106
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 77 YSKIYNRYEKKNFFGKN 27
Y+ YN Y KK ++ N
Sbjct: 97 YNNNYNNYNKKLYYNIN 113
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 1.8
Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -1
Query: 73 RKY--ITDTKKKIFLEKTNKKCNQK 5
R+Y + + K+K+ E+TN+K N +
Sbjct: 16 RRYEKLHNEKEKLLEERTNRKRNSR 40
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 1.8
Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -1
Query: 73 RKY--ITDTKKKIFLEKTNKKCNQK 5
R+Y + + K+K+ E+TN+K N +
Sbjct: 16 RRYEKLHNEKEKLLEERTNRKRNSR 40
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 20.2 bits (40), Expect = 2.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = -3
Query: 107 TDRLIFDTQTYSKIYNRYE---KKNFFGK 30
+DRL TQT S+I + Y+ + NF G+
Sbjct: 31 SDRLENVTQTISRILDGYDIRLRPNFGGE 59
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 165 ENAPLPP 145
ENAPLPP
Sbjct: 1106 ENAPLPP 1112
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = -3
Query: 92 FDTQTYSKIYNRYEKKNFF 36
++ Y YN Y KK ++
Sbjct: 324 YNNNNYKYNYNNYNKKLYY 342
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = +2
Query: 56 ICYIFSSMFEYRILSGRCY 112
ICY+ + Y I +C+
Sbjct: 658 ICYLGKAYLMYAIAGSQCF 676
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 19.4 bits (38), Expect = 4.2
Identities = 13/53 (24%), Positives = 20/53 (37%)
Frame = -1
Query: 163 ECSATPAEGCEPASGASVAPTA*YSILKHTRKYITDTKKKIFLEKTNKKCNQK 5
EC ATP G P Y+ Y+ + KI+ + + C Q+
Sbjct: 28 ECQATPVIHFLQYPGCVPKPIPSYACRGRCSSYLQVSGSKIWQMERSCMCCQE 80
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 68 IYNRYEKKNFFGKN*QKM*SKV 3
I E++N FG+N + + KV
Sbjct: 91 ILGHSERRNIFGENDELIAEKV 112
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 18.2 bits (35), Expect = 9.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 153 LPPLKDVNRPLVHL 112
LPP +N+PL+ L
Sbjct: 490 LPPPYRLNKPLMSL 503
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -1
Query: 85 LKHTRKYITDTKKKIF 38
L+H + + D+ KK+F
Sbjct: 81 LRHLPRSMQDSTKKLF 96
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 77 YSKIYNRYEK 48
Y K+YN EK
Sbjct: 19 YEKLYNEKEK 28
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 77 YSKIYNRYEK 48
Y K+YN EK
Sbjct: 19 YEKLYNEKEK 28
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 77 YSKIYNRYEK 48
Y K+YN EK
Sbjct: 19 YEKLYNEKEK 28
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 77 YSKIYNRYEK 48
Y K+YN EK
Sbjct: 19 YEKLYNEKEK 28
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 77 YSKIYNRYEK 48
Y K+YN EK
Sbjct: 19 YEKLYNEKEK 28
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 18.2 bits (35), Expect = 9.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 156 PLPPLKDVNRPLVHL*HRPLN 94
PLPP + P + L RP++
Sbjct: 639 PLPPKRIRKMPSMPLLPRPIS 659
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 18.2 bits (35), Expect = 9.6
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -1
Query: 172 NLGECSATPAEGCEPASGASVAP 104
NLG + G PAS V P
Sbjct: 97 NLGYTNKMSTRGKRPASPGYVQP 119
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 55 YLLYIFEYV 81
YLL+IF +V
Sbjct: 10 YLLFIFNFV 18
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 18.2 bits (35), Expect = 9.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 95 IFDTQTYSKI 66
IFDT TY I
Sbjct: 497 IFDTYTYDTI 506
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,641
Number of Sequences: 438
Number of extensions: 495
Number of successful extensions: 31
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 37
effective length of database: 130,137
effective search space used: 2602740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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