Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11i10
(348 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK123032-1|BAC85519.1| 274|Homo sapiens factor. protein. 31 1.3
BC108252-1|AAI08253.1| 532|Homo sapiens LRRC8E protein protein. 30 1.7
BC070089-1|AAH70089.1| 796|Homo sapiens leucine rich repeat con... 30 1.7
BC022216-1|AAH22216.2| 592|Homo sapiens LRRC8E protein protein. 30 1.7
AL834474-1|CAD39133.1| 622|Homo sapiens hypothetical protein pr... 30 1.7
BC001214-1|AAH01214.1| 334|Homo sapiens leucine carboxyl methyl... 29 4.0
AF151826-1|AAD34063.1| 334|Homo sapiens CGI-68 protein protein. 29 4.0
AF037601-1|AAF18267.1| 334|Homo sapiens leucine carboxyl methyl... 29 4.0
AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens ... 29 5.3
AF263918-1|AAF73293.1| 910|Homo sapiens inner nuclear membrane ... 28 7.0
AF112299-1|AAD31593.2| 911|Homo sapiens integral inner nuclear ... 28 7.0
M23115-1|AAA53194.1| 997|Homo sapiens HK2 protein. 28 9.3
M23114-1|AAA53193.1| 1042|Homo sapiens HK1 protein. 28 9.3
BC035588-1|AAH35588.1| 1042|Homo sapiens ATPase, Ca++ transporti... 28 9.3
>AK123032-1|BAC85519.1| 274|Homo sapiens factor. protein.
Length = 274
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +2
Query: 122 VCSCDQTKTCGCEQEVVFVLGVIHC---FFICYPLQLSVHYCHC 244
VC C C C V+V G +H ++C +++ V C C
Sbjct: 88 VCICVCAHVCTCVHSFVYVCGCVHVGMRVYLCEHVRMCVSLCAC 131
>BC108252-1|AAI08253.1| 532|Homo sapiens LRRC8E protein protein.
Length = 532
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 144 LVWSQLQTPLCPCRVESVEVEGALSFCC 61
LV+ + + L CRVE+ EV G SFCC
Sbjct: 10 LVYVEKISFLVACRVETSEVTGYASFCC 37
>BC070089-1|AAH70089.1| 796|Homo sapiens leucine rich repeat
containing 8 family, member E protein.
Length = 796
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 144 LVWSQLQTPLCPCRVESVEVEGALSFCC 61
LV+ + + L CRVE+ EV G SFCC
Sbjct: 274 LVYVEKISFLVACRVETSEVTGYASFCC 301
>BC022216-1|AAH22216.2| 592|Homo sapiens LRRC8E protein protein.
Length = 592
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 144 LVWSQLQTPLCPCRVESVEVEGALSFCC 61
LV+ + + L CRVE+ EV G SFCC
Sbjct: 70 LVYVEKISFLVACRVETSEVTGYASFCC 97
>AL834474-1|CAD39133.1| 622|Homo sapiens hypothetical protein
protein.
Length = 622
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 144 LVWSQLQTPLCPCRVESVEVEGALSFCC 61
LV+ + + L CRVE+ EV G SFCC
Sbjct: 100 LVYVEKISFLVACRVETSEVTGYASFCC 127
>BC001214-1|AAH01214.1| 334|Homo sapiens leucine carboxyl
methyltransferase 1 protein.
Length = 334
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 95 LSTRQGHKGVCSCDQTKTCGCEQEVVFVLGVIHCFFICYPLQLSVHYCHCP 247
++TRQ + SC T +C + E V G +C +S+ Y H P
Sbjct: 1 MATRQRESSITSCCSTSSCDADDE--GVRGTCEDASLCKRFAVSIGYWHDP 49
>AF151826-1|AAD34063.1| 334|Homo sapiens CGI-68 protein protein.
Length = 334
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 95 LSTRQGHKGVCSCDQTKTCGCEQEVVFVLGVIHCFFICYPLQLSVHYCHCP 247
++TRQ + SC T +C + E V G +C +S+ Y H P
Sbjct: 1 MATRQRESSITSCCSTSSCDADDE--GVRGTCEDASLCKRFAVSIGYWHDP 49
>AF037601-1|AAF18267.1| 334|Homo sapiens leucine carboxyl
methyltransferase protein.
Length = 334
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 95 LSTRQGHKGVCSCDQTKTCGCEQEVVFVLGVIHCFFICYPLQLSVHYCHCP 247
++TRQ + SC T +C + E V G +C +S+ Y H P
Sbjct: 1 MATRQRESSITSCCSTSSCDADDE--GVRGTCEDASLCKRFAVSIGYWHDP 49
>AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ12547 fis, clone NT2RM4000634. ).
Length = 307
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 122 VCSCDQTKTCGCEQEVVFVLGVIHCFFICYPLQLSVHYCHCPNLVI 259
VC+C CGC V V C F+C L + VH C C L +
Sbjct: 169 VCAC----VCGCTFVCVCAC-VCGCTFVCVCLCVWVHICVCVCLCV 209
>AF263918-1|AAF73293.1| 910|Homo sapiens inner nuclear membrane
protein protein.
Length = 910
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 133 RPDQNVWLRTRSSVRSRCHSLLLYLLPTAIVCPLLSLSKF 252
RP + W R R + + H LLL L +VC +L K+
Sbjct: 614 RPLMSFWCRFRRAFVTVTHRLLLLCLGVVMVCVVLRYMKY 653
>AF112299-1|AAD31593.2| 911|Homo sapiens integral inner nuclear
membrane protein MAN1 protein.
Length = 911
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 133 RPDQNVWLRTRSSVRSRCHSLLLYLLPTAIVCPLLSLSKF 252
RP + W R R + + H LLL L +VC +L K+
Sbjct: 615 RPLMSFWCRFRRAFVTVTHRLLLLCLGVVMVCVVLRYMKY 654
>M23115-1|AAA53194.1| 997|Homo sapiens HK2 protein.
Length = 997
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 91 NTLHT-ARTQRSLQLRPDQNVWLRTRSSVRSRCHSLLLYLLPTAIVCPLLSLS 246
N L++ + Q L++ P +N+WL + H L+LY+ P ++ + L+
Sbjct: 910 NALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLN 962
>M23114-1|AAA53193.1| 1042|Homo sapiens HK1 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 91 NTLHT-ARTQRSLQLRPDQNVWLRTRSSVRSRCHSLLLYLLPTAIVCPLLSLS 246
N L++ + Q L++ P +N+WL + H L+LY+ P ++ + L+
Sbjct: 910 NALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLN 962
>BC035588-1|AAH35588.1| 1042|Homo sapiens ATPase, Ca++ transporting,
cardiac muscle, slow twitch 2 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 91 NTLHT-ARTQRSLQLRPDQNVWLRTRSSVRSRCHSLLLYLLPTAIVCPLLSLS 246
N L++ + Q L++ P +N+WL + H L+LY+ P ++ + L+
Sbjct: 910 NALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLN 962
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,315,617
Number of Sequences: 237096
Number of extensions: 929593
Number of successful extensions: 2361
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2361
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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