Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt11h05
         (644 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U83115-1|AAB53791.1| 1637|Homo sapiens non-lens beta gamma-cryst...    31   4.6  
AL390074-1|CAH72091.1| 1723|Homo sapiens absent in melanoma 1 pr...    31   4.6  
AL359292-2|CAI21046.1| 1723|Homo sapiens absent in melanoma 1 pr...    31   4.6  

>U83115-1|AAB53791.1| 1637|Homo sapiens non-lens beta gamma-crystallin
            like protein protein.
          Length = 1637

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
 Frame = -2

Query: 568  NDSIHSPKKVKFVLKNN---CMQKPVDY---YKSVRQSPSIPFDSSKTPARTNLKPSTPS 407
            ND +     ++ V+K+N   C     D+   +KS R  PSI F          L+ S  +
Sbjct: 870  NDDMEKANHIESVIKSNLPNCANSDTDFMGLFKSSRYDPSISFSGMSLSDTMTLRGSVQN 929

Query: 406  PINP 395
             +NP
Sbjct: 930  KLNP 933


>AL390074-1|CAH72091.1| 1723|Homo sapiens absent in melanoma 1
            protein.
          Length = 1723

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
 Frame = -2

Query: 568  NDSIHSPKKVKFVLKNN---CMQKPVDY---YKSVRQSPSIPFDSSKTPARTNLKPSTPS 407
            ND +     ++ V+K+N   C     D+   +KS R  PSI F          L+ S  +
Sbjct: 956  NDDMEKANHIESVIKSNLPNCANSDTDFMGLFKSSRYDPSISFSGMSLSDTMTLRGSVQN 1015

Query: 406  PINP 395
             +NP
Sbjct: 1016 KLNP 1019


>AL359292-2|CAI21046.1| 1723|Homo sapiens absent in melanoma 1
            protein.
          Length = 1723

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
 Frame = -2

Query: 568  NDSIHSPKKVKFVLKNN---CMQKPVDY---YKSVRQSPSIPFDSSKTPARTNLKPSTPS 407
            ND +     ++ V+K+N   C     D+   +KS R  PSI F          L+ S  +
Sbjct: 956  NDDMEKANHIESVIKSNLPNCANSDTDFMGLFKSSRYDPSISFSGMSLSDTMTLRGSVQN 1015

Query: 406  PINP 395
             +NP
Sbjct: 1016 KLNP 1019


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,544,337
Number of Sequences: 237096
Number of extensions: 1697350
Number of successful extensions: 3423
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3416
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)