Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11f07
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 97 5e-20
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 97 5e-20
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 97 5e-20
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 97 5e-20
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 97 5e-20
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 97 5e-20
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 95 3e-19
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 95 3e-19
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 95 3e-19
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 95 3e-19
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 95 3e-19
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 95 3e-19
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 95 3e-19
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 95 3e-19
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 95 3e-19
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 95 3e-19
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 95 3e-19
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 95 3e-19
AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protei... 95 3e-19
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 95 3e-19
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 95 3e-19
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 95 3e-19
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 95 3e-19
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 95 3e-19
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 95 3e-19
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 93 8e-19
AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens ... 89 1e-17
AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open rea... 83 9e-16
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 83 9e-16
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 83 9e-16
AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open read... 71 5e-12
AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open read... 69 1e-11
AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open read... 69 1e-11
U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein. 62 2e-09
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote... 62 2e-09
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein. 62 2e-09
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 97.1 bits (231), Expect = 5e-20
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 442 QEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 500
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 97.1 bits (231), Expect = 5e-20
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 553 QEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 611
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 97.1 bits (231), Expect = 5e-20
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 556 QEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 614
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 97.1 bits (231), Expect = 5e-20
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 556 QEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 614
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 97.1 bits (231), Expect = 5e-20
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 556 QEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 614
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 97.1 bits (231), Expect = 5e-20
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 556 QEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 614
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 565 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 623
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 565 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 623
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++KVDEAVAVL
Sbjct: 551 QKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVL 609
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 581 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 639
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 581 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 639
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 552 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 610
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++KVDEAVAVL
Sbjct: 551 QKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVL 609
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++KVDEAVAVL
Sbjct: 551 QKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVL 609
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 565 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 623
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 581 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 639
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 536 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 594
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 331 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 389
>AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 194
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 119 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 177
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 565 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 623
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 581 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 639
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 536 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 594
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++KVDEAVAVL
Sbjct: 551 QKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVL 609
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++KVDEAVAVL
Sbjct: 551 QKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVL 609
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVL
Sbjct: 279 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 337
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 93.1 bits (221), Expect = 8e-19
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEA AVL
Sbjct: 292 QEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAAAVL 350
>AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ45986 fis, clone PUAEN2000594, highly similar
to Polyadenylate-binding protein 1. ).
Length = 146
Score = 89.4 bits (212), Expect = 1e-17
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = -1
Query: 656 RNRNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + + LGE LFPLIQ MHP LAGKITG+LLEIDNSELLHML+ ESL +KVDEAVAVL
Sbjct: 66 QEQKQMLGEWLFPLIQAMHPTLAGKITGVLLEIDNSELLHMLKSPESLHSKVDEAVAVL 124
>AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open
reading frame 119 protein.
Length = 168
Score = 83.0 bits (196), Expect = 9e-16
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = -1
Query: 650 RNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + +GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK+DEAVAVL
Sbjct: 98 QKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVL 154
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 83.0 bits (196), Expect = 9e-16
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = -1
Query: 650 RNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + +GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK+DEAVAVL
Sbjct: 544 QKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVL 600
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 83.0 bits (196), Expect = 9e-16
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = -1
Query: 650 RNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ + +GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK+DEAVAVL
Sbjct: 544 QKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVL 600
>AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 149
Score = 70.5 bits (165), Expect = 5e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = -1
Query: 650 RNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKV 501
+ + +GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK+
Sbjct: 98 QKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 147
>AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 171
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = -1
Query: 650 RNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 504
+ + +GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK
Sbjct: 98 QKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAK 146
>AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 151
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = -1
Query: 650 RNRCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 504
+ + +GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK
Sbjct: 79 QKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAK 127
>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
Length = 2798
Score = 61.7 bits (143), Expect = 2e-09
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = -1
Query: 644 RCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ ++
Sbjct: 2394 QALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELI 2448
>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
protein.
Length = 2799
Score = 61.7 bits (143), Expect = 2e-09
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = -1
Query: 644 RCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ ++
Sbjct: 2395 QALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELI 2449
>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
Length = 2820
Score = 61.7 bits (143), Expect = 2e-09
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = -1
Query: 644 RCLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 480
+ LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ ++
Sbjct: 2417 QALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELI 2471
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,254,176
Number of Sequences: 237096
Number of extensions: 1160508
Number of successful extensions: 2134
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2134
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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