Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt11e22
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025201-1|ABF17892.1| 1486|Drosophila melanogaster FI01114p pro...    29   5.2  
AY061438-1|AAL28986.1| 1486|Drosophila melanogaster LD36562p pro...    29   5.2  
AF356082-1|AAK49526.1| 1486|Drosophila melanogaster C2H2 zinc fi...    29   5.2  
AF285778-1|AAG45962.1| 1486|Drosophila melanogaster C2H2 zinc fi...    29   5.2  
AE013599-177|AAM68380.1| 1486|Drosophila melanogaster CG9403-PC,...    29   5.2  
AE013599-176|AAF57358.1| 1486|Drosophila melanogaster CG9403-PA,...    29   5.2  
AE013599-175|AAS64777.1| 1582|Drosophila melanogaster CG9403-PD,...    29   5.2  

>BT025201-1|ABF17892.1| 1486|Drosophila melanogaster FI01114p
           protein.
          Length = 1486

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 605 QHNTLVECQNINKNVNSTTGSKKSHS 528
           +H+ L +C N N N NS + S  SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889


>AY061438-1|AAL28986.1| 1486|Drosophila melanogaster LD36562p
           protein.
          Length = 1486

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 605 QHNTLVECQNINKNVNSTTGSKKSHS 528
           +H+ L +C N N N NS + S  SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889


>AF356082-1|AAK49526.1| 1486|Drosophila melanogaster C2H2 zinc
           finger transcriptionfactor JING protein.
          Length = 1486

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 605 QHNTLVECQNINKNVNSTTGSKKSHS 528
           +H+ L +C N N N NS + S  SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889


>AF285778-1|AAG45962.1| 1486|Drosophila melanogaster C2H2 zinc
           finger protein protein.
          Length = 1486

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 605 QHNTLVECQNINKNVNSTTGSKKSHS 528
           +H+ L +C N N N NS + S  SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889


>AE013599-177|AAM68380.1| 1486|Drosophila melanogaster CG9403-PC,
           isoform C protein.
          Length = 1486

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 605 QHNTLVECQNINKNVNSTTGSKKSHS 528
           +H+ L +C N N N NS + S  SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889


>AE013599-176|AAF57358.1| 1486|Drosophila melanogaster CG9403-PA,
           isoform A protein.
          Length = 1486

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 605 QHNTLVECQNINKNVNSTTGSKKSHS 528
           +H+ L +C N N N NS + S  SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889


>AE013599-175|AAS64777.1| 1582|Drosophila melanogaster CG9403-PD,
            isoform D protein.
          Length = 1582

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 605  QHNTLVECQNINKNVNSTTGSKKSHS 528
            +H+ L +C N N N NS + S  SHS
Sbjct: 960  KHDLLPDCTNSNSNSNSCSSSTYSHS 985


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,092,183
Number of Sequences: 53049
Number of extensions: 479502
Number of successful extensions: 1270
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)