Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11e06
(584 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 54 1e-07
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 48 7e-06
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 46 2e-05
09_02_0430 - 9313768-9314259,9314347-9315299,9316875-9317022 45 5e-05
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 44 7e-05
02_01_0455 + 3266123-3266258,3266348-3266670,3267083-3267661,326... 43 2e-04
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 42 3e-04
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 41 8e-04
09_02_0311 + 7164774-7166327 41 8e-04
08_01_0526 + 4575160-4576719 39 0.003
03_02_0023 + 5065962-5066079,5066179-5067614 38 0.004
10_06_0088 - 10538037-10539463,10539696-10539789 38 0.008
09_02_0157 + 5083771-5083996,5084007-5084326,5085958-5086392,508... 38 0.008
12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387 37 0.014
07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936 37 0.014
07_03_0887 - 22299783-22300913,22301241-22301569,22301958-22302090 36 0.024
01_05_0390 - 21720118-21720573,21720667-21721296,21721427-217217... 36 0.024
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931 36 0.031
11_06_0421 + 23331702-23331723,23332161-23332197,23333397-233335... 36 0.031
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727... 35 0.041
01_05_0389 + 21716056-21716191,21716275-21716597,21716889-217175... 35 0.041
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 35 0.055
11_04_0293 + 15926561-15928834 34 0.072
03_01_0204 + 1611837-1611840,1611926-1612048,1614570-1614659,161... 34 0.072
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 34 0.096
03_05_0199 - 21893051-21893509,21893835-21894482,21894566-218948... 34 0.096
02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246 34 0.096
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 33 0.17
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 33 0.22
03_02_0024 + 5079690-5081351 33 0.22
02_05_1340 + 35797923-35799881 32 0.29
12_02_0762 - 22915841-22916473,22917044-22917057,22918945-22919983 32 0.39
04_04_1600 + 34704527-34704758,34705393-34706777 31 0.51
02_02_0424 + 10074206-10074287,10074389-10074485,10074584-100746... 31 0.51
06_01_0295 - 2154069-2155483,2155561-2155708 31 0.68
03_01_0010 - 94931-96034,96117-96442,97154-97283 31 0.68
11_06_0596 + 25385744-25388890 30 1.6
11_06_0592 - 25327128-25329566 30 1.6
11_06_0493 - 24310412-24311362,24311437-24311783,24311857-24311989 30 1.6
09_04_0120 + 14836644-14836949,14837038-14837664,14837916-14838359 29 2.1
08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128 29 2.1
02_04_0321 + 22020126-22020431,22020520-22021626 29 2.1
11_06_0495 - 24319531-24320831,24320923-24321109,24322919-243230... 29 2.7
04_03_1031 + 21850857-21851009,21852229-21852350,21852447-218528... 28 4.8
12_02_0795 + 23217463-23217684,23218296-23219155,23220001-232209... 28 6.3
11_06_0198 - 21158350-21159528 27 8.3
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 27 8.3
02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797 27 8.3
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 53.6 bits (123), Expect = 1e-07
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Frame = +3
Query: 216 YCIGPYVSMLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHF-V 392
Y +G V+ L + I+ +V S +PESP + K G + E E++L++LRGK V
Sbjct: 125 YIVGTMVTWRMLVIAGLVPSIILIVGLSFIPESPRWLAKVGRQKEFEIALQRLRGKDADV 184
Query: 393 RDELESMNSLVTENMKN--KSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQ 566
E + + E ++N K+ +DL R + +I+ +G+ QQF G I+ Y +
Sbjct: 185 SIEAAEIKEFI-ETIENLPKAGVQDLFN-RAYIRPVIVGVGLMVFQQFVGINGILFYASE 242
Query: 567 IFDAA 581
F +A
Sbjct: 243 TFVSA 247
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/107 (25%), Positives = 53/107 (49%)
Frame = +3
Query: 261 NIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSLVTENMK 440
+I IL + + PESP + + G +AE ++KKL G+ V + + + + + +
Sbjct: 232 SIVPSILLALGMAVSPESPRWLFQQGKLSQAETAIKKLYGREKVAEVMYDLKAASQGSSE 291
Query: 441 NKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIFDAA 581
+ W DL + R K + + ++ QQ G A++ Y+ +F +A
Sbjct: 292 PDAGWLDLFSKR-YWKVVSVGAAMFLFQQLAGINAVVYYSTSVFRSA 337
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 216 YCIGPYVSMLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHF-V 392
Y IG +S L + +V +PESP + G E SL+KLRG++ +
Sbjct: 1109 YIIGALLSWRSLVLVGLVPCAFLLVGLLFIPESPRWLANTGRVKEFNASLQKLRGENADI 1168
Query: 393 RDELESMNSLVTENMKN--KSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQ 566
+E + + E++++ ++R +DL R N +I+ +G+ QQ G A+ YT
Sbjct: 1169 SEEAAGIREYI-ESLRSLPEARVQDLFQ-RKNLFAVIVGVGLMVFQQLGGINALGFYTSY 1226
Query: 567 IFDAA 581
IF +A
Sbjct: 1227 IFSSA 1231
>09_02_0430 - 9313768-9314259,9314347-9315299,9316875-9317022
Length = 530
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +3
Query: 303 MPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSLVTENMKNKSRWKDLITVRGN 482
+PE+P ++ G +EA L+K+RG V E E + + ++ L+ R
Sbjct: 226 LPETPNSLVEMGRLEEARRVLEKVRGTRKVDAEFEDLREASEAARAVRGTFRSLLAARNR 285
Query: 483 KKGLIILLGIYFTQQFCGSTAIISYTQQIFDA 578
+ +I LGI QQ G +I+ Y+ IF +
Sbjct: 286 PQLIIGALGIPAFQQLSGMNSILFYSPVIFQS 317
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Frame = +3
Query: 225 GPYVSMLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDEL 404
G + MLG+A+ A+ F++ F +PESP + + G ++EAE L+K+ V E
Sbjct: 183 GTWRWMLGVAAIP-AVVQFFLMLF--LPESPRWLYRKGREEEAEAILRKIYSAEEVEREK 239
Query: 405 ESMNSLVTENMKNKSRWKD------LITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQ 566
E + V + +S + L+T ++GL+ +G+ QQ G ++ Y+
Sbjct: 240 EELKESVEAEARERSSSEKTSLVALLMTTATVRRGLVAGVGLQVFQQLVGINTVMYYSPT 299
Query: 567 IFDAA 581
I A
Sbjct: 300 IVQLA 304
>02_01_0455 +
3266123-3266258,3266348-3266670,3267083-3267661,
3267866-3268336
Length = 502
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/110 (27%), Positives = 50/110 (45%)
Frame = +3
Query: 243 LGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSL 422
+GLA + ++ + + A+P++P I G + A +L K+RG VR E E + +
Sbjct: 204 VGLAFGTVPAAVIALGSL-AIPDTPVSLIARGEGEAARATLAKIRGVDDVRAEFEDLTTA 262
Query: 423 VTENMKNKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
E+ W++L K L + I F QQ G I+ Y +F
Sbjct: 263 SEESKAVAHPWRELFFGGRYKPQLAFAVLIPFFQQLTGINVIMFYAPVLF 312
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/119 (26%), Positives = 54/119 (45%)
Frame = +3
Query: 216 YCIGPYVSMLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVR 395
Y +G +V LA L + +PESP + K + D+ E SL+ LRG
Sbjct: 206 YLLGMFVPWRLLAVIGSIPCTLLIPGLFFIPESPRWLAKMKMMDDFEASLQVLRG---FE 262
Query: 396 DELESMNSLVTENMKNKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
++ + ++ + N + R+K+L + + L+I G+ Q G I+ Y +IF
Sbjct: 263 TDITAERAVASANKRTTVRFKEL-NQKKYRTPLLIGTGLLVLQNLSGINGILFYASRIF 320
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/99 (26%), Positives = 47/99 (47%)
Frame = +3
Query: 276 ILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSLVTENMKNKSRW 455
+L V ESP + K G D+A ++ + G V +E + S+V N +++ W
Sbjct: 250 VLIVAGMQFAVESPRWLAKVGRIDDARNVVEHVWGPSEVEKSMEEIQSVVA-NDDSQASW 308
Query: 456 KDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
+L+ N+ L I ++F QQF G ++ ++ F
Sbjct: 309 SELLEEPHNRVAL-IGGSLFFLQQFAGINGVLYFSSLTF 346
>09_02_0311 + 7164774-7166327
Length = 517
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +3
Query: 303 MPESPYYYIKAGLKDEAELSLKKLRGKHF-VRDELESMNSLVTENMKNKSRWKDLITVRG 479
+PE+P ++ G + EA L+++RG+ + DE + + + S W+D++ R
Sbjct: 222 LPETPNSLLERGRRGEARRMLQRVRGEGVDMEDEYNDLVAAGEASHAVASPWRDILR-RR 280
Query: 480 NKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
N+ L++ + I QQ G I+ Y +F
Sbjct: 281 NRPPLVMAVAIPLFQQLTGINVIMFYAPVLF 311
>08_01_0526 + 4575160-4576719
Length = 519
Score = 38.7 bits (86), Expect = 0.003
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Frame = +3
Query: 243 LGLASFNIALPILFVVTFSAM--PESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMN 416
LGLA +P L ++T A+ P++P I G +A+ L K+RG V DE + M
Sbjct: 205 LGLAG----VPAL-IITLGALVLPDTPNSLIARGYAGDAKRVLVKIRGTDDVHDEYDDMV 259
Query: 417 SLVTENMKNKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
+ E + W++++ R + L I + I QQ G I+ Y +F
Sbjct: 260 AASEEAASIEHPWRNILH-RKYRPQLTIAILIPCFQQLTGINVIMFYAPVLF 310
>03_02_0023 + 5065962-5066079,5066179-5067614
Length = 517
Score = 38.3 bits (85), Expect = 0.004
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 21/124 (16%)
Frame = +3
Query: 273 PILFVVTFSAMPESPYYYIKAG---------LK-----DEAE---LSLKKLRGKHFVRDE 401
PI + AMPESP + + G LK DEAE L +KK G +
Sbjct: 192 PIFLGIAVLAMPESPRWLVMRGRIEDARRVLLKTSDSPDEAEDRLLDIKKAVGIPEDASD 251
Query: 402 LESMNSLVTENMKNKSR--WKDLI--TVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQI 569
E + ++V N ++ WK+L+ R ++ L+ LG+ F QQ G ++ Y+ ++
Sbjct: 252 GEDVVAIVRANKASQGEGVWKELLLNPTRPVRRMLVAGLGLMFIQQATGVDCVVMYSPRV 311
Query: 570 FDAA 581
F+ A
Sbjct: 312 FERA 315
>10_06_0088 - 10538037-10539463,10539696-10539789
Length = 506
Score = 37.5 bits (83), Expect = 0.008
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Frame = +3
Query: 237 SMLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRD----EL 404
+MLGL + A L V+ AMPESP + + G +EA L+++ + D E+
Sbjct: 175 AMLGLGALPSAALALGVL---AMPESPRWLVVQGRAEEALSVLRRVCDRPSEADARLAEI 231
Query: 405 ESMNSLVTEN-------MKNKSRWKDLI--TVRGNKKGLIILLGIYFTQQFCGSTAIISY 557
++ L ++ K W++L ++ +I LGI+F Q G A++ Y
Sbjct: 232 KAAAGLADDDGAAANAGSGGKGVWRELFLHPTPPVRRIVIAALGIHFFQHLTGIEAVVLY 291
Query: 558 TQQIFDAA 581
+ +IF AA
Sbjct: 292 SPRIFKAA 299
>09_02_0157 +
5083771-5083996,5084007-5084326,5085958-5086392,
5087277-5087921
Length = 541
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 303 MPESPYYYIKAGL-KDEAELSLKKLRGKHFVRDELESMNSLVTENMKNKSRWKDLITVRG 479
+PE+P ++ G K + L ++RG V DELE + + ++ + + ++T R
Sbjct: 252 LPETPNSLLQQGRDKRRVRVLLTRIRGVSDVEDELEDIVAANSDKANSSRGLQMIVTQRQ 311
Query: 480 NKKGLIILLGIYFTQQFCGSTAIISY 557
+ L++ + I F QQ G AI Y
Sbjct: 312 YRPQLVMAIMIPFFQQVTGINAISFY 337
>12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387
Length = 487
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Frame = +3
Query: 270 LPILFVVT-FSAMPESPYYYIKAGLKDEAELSLKKL--------RGKHFVRDELESMNSL 422
+P +F+ MPESP + G + EA + L + + + D + + S+
Sbjct: 198 VPTVFLAAGVLTMPESPRWLAMKGRRGEARVVLDRTSDTPAEAEQRLQEIEDVVAAAGSV 257
Query: 423 VTENMKNKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIFDAA 581
WK++ T G ++ L I+L + F QQ G +++ Y ++ AA
Sbjct: 258 AGNGNGGGGAWKEVATKPGVRRVLAIVLTLQFFQQASGIDSVVLYGPRVLAAA 310
>07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936
Length = 838
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +3
Query: 249 LASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMN---S 419
L + +LF+ + + E+P ++ G +D +L+++RG V DEL+ +
Sbjct: 209 LGGAGVPAAVLFLGSL-VITETPTSLVERGRRDAGRATLERIRGTRDVGDELDEIARACE 267
Query: 420 LVTENMKNKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
+S ++ L R ++ L+I + + QQF G AI+ Y +F
Sbjct: 268 AAAALSAEESAYRRL-RRRESRPPLVIAVAMQVFQQFTGINAIMFYAPVLF 317
>07_03_0887 - 22299783-22300913,22301241-22301569,22301958-22302090
Length = 530
Score = 35.9 bits (79), Expect = 0.024
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = +3
Query: 303 MPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSLVTENMKNKSRWKDLITVRGN 482
+P++P I G D A+ L+++RG + +E + + E+ W++++ R
Sbjct: 224 LPDTPNSLIDRGHTDAAKRMLRRVRGTDDIEEEYNDLVAASEESKLVAHPWRNILQ-RRY 282
Query: 483 KKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
+ L + + I QQ G I+ Y +F
Sbjct: 283 RPQLTMAIAIPLFQQLTGINVIMFYAPVLF 312
>01_05_0390 -
21720118-21720573,21720667-21721296,21721427-21721749,
21721844-21721973
Length = 512
Score = 35.9 bits (79), Expect = 0.024
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Frame = +3
Query: 243 LGLASFNIALP-ILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNS 419
LGLA A+P ++ V +P++P + G ++EA L+++RG + E + + +
Sbjct: 204 LGLA----AVPAVIMTVGSILLPDTPNSLLSRGKENEARTMLRRIRGTEDIGPEYDDLVA 259
Query: 420 LVTENMKNKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
++ W+ L+ R + L++ + I QQ G ++ Y +F
Sbjct: 260 ASEATKAIENPWRTLLE-RRYRPQLVMSVLIPTLQQLTGINVVMFYAPVLF 309
>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
Length = 478
Score = 35.5 bits (78), Expect = 0.031
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +3
Query: 273 PILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRD-ELESMNSLVTE-NMKNK 446
P+ AMPESP + G +A + L + D LE + V E +
Sbjct: 199 PVFLAAAVLAMPESPRWLAMRGRHADARVVLARTSDSAEEADLRLEEIKHAVAEPHDAGG 258
Query: 447 SRWKDLITVRGN--KKGLIILLGIYFTQQFCGSTAIISYTQQIFDAA 581
W++L+ ++ L ++G+ F QQ G AI+ Y+ +F A
Sbjct: 259 GVWRELLFRPSAMVRRILATVIGLQFFQQASGIDAIVLYSPLVFKKA 305
>11_06_0421 +
23331702-23331723,23332161-23332197,23333397-23333533,
23333675-23334241,23335068-23335777,23335915-23336102,
23336489-23336918
Length = 696
Score = 35.5 bits (78), Expect = 0.031
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 276 ILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSLVTENM 437
+ F + +PESP + + G EA +SL+ LRGK V D +L+ + M
Sbjct: 215 VYFALLVFYLPESPRWLVSDGKISEARISLQWLRGKDDVSDRSAGEIALIADGM 268
>02_02_0155 +
7272563-7272630,7272934-7273031,7273491-7274057,
7275121-7276085,7276201-7276388,7276497-7276938
Length = 775
Score = 35.1 bits (77), Expect = 0.041
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +3
Query: 264 IALPILFV--VTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDEL 404
+A+P LF +T +PESP + + G EA+ L+KLRG+ V E+
Sbjct: 199 LAIPSLFFFGLTIFYLPESPRWLVSKGRMAEAKKVLQKLRGREDVSGEM 247
>01_05_0389 +
21716056-21716191,21716275-21716597,21716889-21717518,
21717602-21718054
Length = 513
Score = 35.1 bits (77), Expect = 0.041
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +3
Query: 243 LGLASFNIALPILFVVTFSA-MPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNS 419
LGLA A+P + + S +P++P + G ++EA L+++RG V E + + +
Sbjct: 206 LGLA----AVPAVIMAGGSLFLPDTPNSLLSRGKENEARAMLRRIRGTDDVGPEYDDLVA 261
Query: 420 LVTENMKNKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
+ ++ W+ L+ R + L++ + I QQ G ++ Y +F
Sbjct: 262 ASEASKAIENPWRTLLE-RRYRPQLVMSVLIPTLQQLTGINVVMFYAPVLF 311
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 450 RWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIFDAA 581
+W DL G K L + +GI QQF G ++ YT QI + A
Sbjct: 509 KWADLFEP-GVKHALFVGIGIQILQQFAGINGVLYYTPQILEQA 551
Score = 33.9 bits (74), Expect = 0.096
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 240 MLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDEL 404
MLG+ S I I F +T +PESP + + G EA+ L+ LRG+ V E+
Sbjct: 166 MLGVLS--IPSLIYFALTIFYLPESPRWLVSKGRMAEAKRVLQGLRGREDVSGEM 218
>11_04_0293 + 15926561-15928834
Length = 757
Score = 34.3 bits (75), Expect = 0.072
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 240 MLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDEL 404
MLG+ F +L LFV F +PESP + + G EA + L+ LRG+ V E+
Sbjct: 166 MLGVL-FVPSLLYLFVTVFY-LPESPRWLVSKGRMKEARVVLEMLRGREDVSGEM 218
>03_01_0204 +
1611837-1611840,1611926-1612048,1614570-1614659,
1615529-1616095,1616235-1616959,1617065-1617252,
1617331-1617778
Length = 714
Score = 34.3 bits (75), Expect = 0.072
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 249 LASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSLVT 428
L S +I + ++ +PESP + + G +EA+ +K+LRG + V E+ + +T
Sbjct: 213 LGSLSIPSFVFLLLCIFYLPESPVFLVSKGKIEEAKNVMKRLRGTNEVSSEIAFLIQGLT 272
Query: 429 ENMKN 443
+ N
Sbjct: 273 VDQDN 277
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 33.9 bits (74), Expect = 0.096
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +3
Query: 216 YCIGPYVSMLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVR 395
Y +G +V LA I + + +PESP + K + D+ E SL+ LRG F
Sbjct: 205 YLLGMFVPWRLLAVIGILPCTVLIPGLFFIPESPRWLAKMNMMDDFETSLQVLRG--FET 262
Query: 396 DELESMNSLVTENMKNKS 449
D +N + + K +S
Sbjct: 263 DISAEVNDIKVASSKQQS 280
>03_05_0199 -
21893051-21893509,21893835-21894482,21894566-21894888,
21895978-21896116
Length = 522
Score = 33.9 bits (74), Expect = 0.096
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Frame = +3
Query: 303 MPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSLVTE------NMKNKSRWKDL 464
+P+SP I G ++A L+++RG V DE + + +E + W+D+
Sbjct: 224 LPDSPSSLINRGRHEQARRVLRRIRGTDEVDDEYGDLVAAASEIEVYSGCSARRRPWRDV 283
Query: 465 ITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
+ R + L + + I F QQ G I+ Y +F
Sbjct: 284 LQ-RRYRPQLAMAVLIPFFQQLTGINVIMFYAPVLF 318
>02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246
Length = 554
Score = 33.9 bits (74), Expect = 0.096
Identities = 23/99 (23%), Positives = 47/99 (47%)
Frame = +3
Query: 276 ILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSLVTENMKNKSRW 455
++ +V + +P++P G DEA SL+++RG V EL+ + E+ + KS
Sbjct: 256 VIVIVGAAFIPDTPNSLALRGRLDEARDSLRRIRGAADVDAELKDIVRAAEEDRRYKSGA 315
Query: 456 KDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
+ R + L++ + I + G+ + +T +F
Sbjct: 316 LRRLLRREYRPHLVMAVLIMVFFEMTGAIVVAIFTPLLF 354
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 33.1 bits (72), Expect = 0.17
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Frame = +3
Query: 225 GPYVSMLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDEL 404
G + MLG+A + + + +PESP + + K+EAE L+K+ V +E+
Sbjct: 183 GTWRWMLGIAGLPAFIQFILMCM---LPESPRWLYRQDRKEEAEAILRKIYPAAEVEEEI 239
Query: 405 ESM-NSLVTENMKNKS--------RWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISY 557
+SM S+ E S + ++ + ++GL+ + QQF G ++ Y
Sbjct: 240 DSMRRSIEHEKQLEGSIGEQSLVGKLTKALSSKVVRRGLMAGVIAQVAQQFVGINTVMYY 299
Query: 558 TQQIFDAA 581
+ I A
Sbjct: 300 SPTIVQLA 307
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 234 VSMLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRG 380
+S+LG+ +I +P LF + PESP + K G ++ E SL+ LRG
Sbjct: 194 LSVLGILPCSILIPGLFFI-----PESPRWLAKMGKMEDFESSLQVLRG 237
>03_02_0024 + 5079690-5081351
Length = 553
Score = 32.7 bits (71), Expect = 0.22
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Frame = +3
Query: 273 PILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDE--LESMNSL-VTENMKN 443
P V AMPESP + + G +A L+K +E + N++ + E + +
Sbjct: 226 PAFLAVGVLAMPESPRWLVMQGRIGDARRVLEKTSDSPAEAEERLADIKNAVGIPEGISD 285
Query: 444 ---------KSR-------WKDLIT--VRGNKKGLIILLGIYFTQQFCGSTAIISYTQQI 569
KSR W+DL+ ++ LI LG+ F QQ G A++ Y+ ++
Sbjct: 286 EDEVVAVVHKSRGSHGEGVWRDLLLRPTPAVRRILIACLGLQFFQQASGIDAVVLYSPRV 345
Query: 570 FDAA 581
FD A
Sbjct: 346 FDNA 349
>02_05_1340 + 35797923-35799881
Length = 652
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 240 MLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDEL 404
MLG+ L +L + F +PESP + + G EA L+ LRG+ V E+
Sbjct: 167 MLGVLLLPALLYLLLTIFF--LPESPRWLVSKGRMKEARTVLQMLRGRQDVSAEM 219
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 453 WKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIFDAA 581
W++++ G + L+ + I QQF G + ++ YT QI + A
Sbjct: 413 WREVLEPGGVRHALVCGVAIQILQQFSGISGVLLYTPQILEQA 455
>12_02_0762 - 22915841-22916473,22917044-22917057,22918945-22919983
Length = 561
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 324 YIKAGLKDEAELSLKKLRGKHFVRDELESMNSLV 425
+ K+ L +E L L R + F+RDELE MNS +
Sbjct: 19 FAKSTLVEEVSLQLGVQRDQAFIRDELEMMNSFL 52
>04_04_1600 + 34704527-34704758,34705393-34706777
Length = 538
Score = 31.5 bits (68), Expect = 0.51
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Frame = +3
Query: 231 YVSMLGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEA-ELSLKKLRGKHFVRD--- 398
+VS + + I + +PESP + + DEA E+ LK + ++
Sbjct: 216 HVSWRVMLAVGILPSVSIAFALLVIPESPRWLVMKNRADEAREVLLKVTDSEDEAKERLA 275
Query: 399 ELESMNSLVTE-NMKNKSRWKDLITVRG-NKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
E+E+ ++ + +K+ W++L ++ LI LGI QQ G A++ Y+ IF
Sbjct: 276 EIEAAAAVASAGKYGDKTVWQELTRPSPVIRRMLITGLGIQCFQQITGIDALVYYSPTIF 335
>02_02_0424 +
10074206-10074287,10074389-10074485,10074584-10074651,
10074727-10074859,10075102-10075137,10076109-10076208,
10076312-10076424,10076511-10076604,10077301-10077454,
10077563-10077706,10077802-10077875,10077949-10078037,
10078311-10078365,10078563-10078616
Length = 430
Score = 31.5 bits (68), Expect = 0.51
Identities = 20/88 (22%), Positives = 39/88 (44%)
Frame = +3
Query: 309 ESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSLVTENMKNKSRWKDLITVRGNKK 488
ESP + K G EAE+ +KL G V+ + ++ + ++ +L R N
Sbjct: 234 ESPQWLYKCGRTTEAEIQFEKLLGPLHVKSAMAELSRSERGDDGENVKYSELFYGR-NFN 292
Query: 489 GLIILLGIYFTQQFCGSTAIISYTQQIF 572
+ I ++ QQ G ++ ++ +F
Sbjct: 293 VVFIGTTLFALQQLSGINSVFYFSSTVF 320
>06_01_0295 - 2154069-2155483,2155561-2155708
Length = 520
Score = 31.1 bits (67), Expect = 0.68
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +3
Query: 303 MPESPYYYIKAGLKDEAELS--LKKLRGKHFVRDELESMNSLVTENM-KNKSRWKDLITV 473
+PE+P I+ G + ++ LKK+RG V DEL+++ + + L+T
Sbjct: 227 LPETPNSLIQQGKVERCDVEQLLKKIRGADDVADELDTIVAANSATAGVGGGGLLMLLTQ 286
Query: 474 RGNKKGLIILLGIYFTQQFCGSTAIISY 557
R + L + + I F QQ G AI Y
Sbjct: 287 RRYRPQLAMAVMIPFFQQVTGINAIAFY 314
>03_01_0010 - 94931-96034,96117-96442,97154-97283
Length = 519
Score = 31.1 bits (67), Expect = 0.68
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Frame = +3
Query: 267 ALPILFVVTFSA-MPESPYYYI-KAGLKDEAELSLKKLRGKHFVRDELES--MNSLVTEN 434
A+P F+ + +PE+P + I ++G D A L++LRG V ELE M S V++
Sbjct: 209 AVPAAFLTVGALFLPETPSFVIQRSGDVDSARALLQRLRGTAAVHKELEDLVMASEVSKT 268
Query: 435 MKNKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
+++ R +++ R + L+I + + Q G I Y +F
Sbjct: 269 IRHPLR--NMLR-RRYRPQLVIAVLVPLFNQVTGINVINFYAPVMF 311
>11_06_0596 + 25385744-25388890
Length = 1048
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 339 LKDEAELSLKKLRGK-HFVRDELESMNSLVTENMKNKSRWKD 461
++ EAEL L +RG F+RDE+ES+N L+ K R D
Sbjct: 16 IRKEAEL-LGGVRGDVQFIRDEMESINGLLRHLAGTKERASD 56
>11_06_0592 - 25327128-25329566
Length = 812
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 339 LKDEAELSLKKLRGK-HFVRDELESMNSLVTENMKNKSRWKD 461
+KDEA+L L + G F+RDE++SMN + K+K+ D
Sbjct: 20 VKDEAKL-LGGVEGDIQFIRDEMDSMNGFLLHLTKSKTPHND 60
>11_06_0493 - 24310412-24311362,24311437-24311783,24311857-24311989
Length = 476
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Frame = +3
Query: 273 PILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGK-HFVRDELESMNSLV--TENMKN 443
P+ AMPESP + G +A L + LE + V +
Sbjct: 197 PVFLAAGVLAMPESPRWLAMRGRHADARAVLVRTSDSVEEAELRLEEIKRAVEAPQESAG 256
Query: 444 KSRWKDLITVRGNKKGLII--LLGIYFTQQFCGSTAIISYTQQIFDAA 581
W++L+ I+ ++G++F QQ G AI+ Y+ +F A
Sbjct: 257 VGVWRELLLRPSAMVRRIVTCVVGLHFFQQASGIDAIVLYSPLVFKKA 304
>09_04_0120 + 14836644-14836949,14837038-14837664,14837916-14838359
Length = 458
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/112 (24%), Positives = 51/112 (45%)
Frame = +3
Query: 243 LGLASFNIALPILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRDELESMNSL 422
LGLA+ A +L V +PE+P I+ G +E L+++RG V E M
Sbjct: 154 LGLAA---APALLMTVGGLLLPETPNSLIERGRVEEGRRVLERIRGTADVDAEFTDMAEA 210
Query: 423 VTENMKNKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIFDA 578
+ +++++ R N+ L++ + + Q G +I+ Y +F +
Sbjct: 211 SELANSIEHPFRNILEPR-NRPQLVMAVCMPAFQILTGINSILFYAPVLFQS 261
>08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128
Length = 1226
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 324 YIKAGLKDEAELSLKKLRGKHFVRDELESMNSLV 425
Y + + +E L L R + F+RDELE M S +
Sbjct: 19 YAQTAIAEEGALKLGVQRDQSFIRDELEMMQSFL 52
>02_04_0321 + 22020126-22020431,22020520-22021626
Length = 470
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +3
Query: 279 LFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRD-ELESMNSLVTENMKNKSRW 455
+ +V + +P++P + G DEA SL+++RG D EL+ + E+ ++ +
Sbjct: 163 VILVGAAFIPDTPNSLVLRGKLDEARASLRRIRGAAANIDAELKDIARAAEEDRQHHTGA 222
Query: 456 KDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
I R + L++ + I + G + +T +F
Sbjct: 223 FRRIVRREYRPHLVMAIAIPVFFELTGMIVVTLFTPLLF 261
>11_06_0495 -
24319531-24320831,24320923-24321109,24322919-24323062,
24324467-24324469
Length = 544
Score = 29.1 bits (62), Expect = 2.7
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Frame = +3
Query: 273 PILFVVTFSAMPESPYYYIKAGLKDEAELSLKKLRGKHFVRD-ELESMNSLVTENMKNKS 449
P+ AMPESP + G EA L + D LE + V
Sbjct: 264 PVFLAAGVLAMPESPRWLAMRGRDAEARAVLARTSDTPAEADLRLEEITRAVAAQAGVAG 323
Query: 450 R-WKDLITVRGN---KKGLIILLGIYFTQQFCGSTAIISYTQQIFDAA 581
W+ L+ VR ++ + +L ++F QQ G I+ Y+ +F A
Sbjct: 324 GVWRQLL-VRPTPTVRRIMTNVLSLHFFQQASGIDVIVLYSPLVFKQA 370
>04_03_1031 +
21850857-21851009,21852229-21852350,21852447-21852891,
21852981-21853087,21853192-21854524,21854632-21854859,
21854951-21855181,21855278-21855537,21855651-21856113
Length = 1113
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 320 LLHQSRTERRSRIVVKETKRQTFCKRRAREYEQLSHRKHEK*KSVERSHNR*RKQKRTHH 499
LL + + ++RI+ + +T C +R E QL + K + +R KQ+ +
Sbjct: 197 LLEAEKRKAQARILHIQRAAKTVCSKRESERRQLQEQLESKLQKAKRQRAEYLKQRVSPR 256
Query: 500 SSGN 511
SS +
Sbjct: 257 SSAH 260
>12_02_0795 +
23217463-23217684,23218296-23219155,23220001-23220929,
23221184-23221968
Length = 931
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 333 AGLKDEAELSLKKLRGKHFVRDELESMNSLVTENMKNKSRWK 458
AGL LK LR +H + +++E + + V + K + R+K
Sbjct: 186 AGLVHRMAQHLKTLRVRHQIANQIEKLKARVEDASKRRLRYK 227
>11_06_0198 - 21158350-21159528
Length = 392
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 389 CKRRAREYEQLSHRKHEK*KSVERSHNR*RKQKRTHHSSGNLFHSTVLRQYCDHQ 553
C+R R Y RK E + E R+ ++ HH G+ R+ C+HQ
Sbjct: 87 CRRECRGYRDEPWRKQECMRQCEW-----RRHEQHHHGGGHGGSRPDCREQCEHQ 136
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 240 MLGLASFNIALPILFVVTFSAMPESPYYY--IKAGLKDEAELSLKKLRGKHFVRDELES 410
+ G+A F + + VV + E P Y IKA +K+EAE LK + G +V ++L S
Sbjct: 249 LTGMA-FRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILG--YVEEDLVS 304
>02_04_0324 + 22032748-22032895,22035274-22035593,22035709-22036797
Length = 518
Score = 27.5 bits (58), Expect = 8.3
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Frame = +3
Query: 270 LPILFVVTFSA-MPESPYYYIKAGLKDEAELSLKKLRGKHF----VRDELESMNSLVTEN 434
+P L V+ +A +P++P G DEA SL+++RG V EL+ + E+
Sbjct: 213 VPALIVIVGAASIPDTPNSLALRGRLDEARDSLRRIRGAGVAAADVDAELKDIVRAAEED 272
Query: 435 MKNKSRWKDLITVRGNKKGLIILLGIYFTQQFCGSTAIISYTQQIF 572
+ +S + R + L++ + I + G + +T +F
Sbjct: 273 RRYESGALRRLLRREYRPHLVMAVLITVFYEMTGGVVVSIFTPLLF 318
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,416,856
Number of Sequences: 37544
Number of extensions: 208019
Number of successful extensions: 608
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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