Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt11e02
         (212 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    21   5.2  
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    21   6.9  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    21   6.9  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    20   9.1  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 165 NRFTVRLPCTS 197
           NRFT R P TS
Sbjct: 303 NRFTTRTPATS 313


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 199 TLVHGRRTVNR 167
           T+VH  RTVNR
Sbjct: 671 TVVHNDRTVNR 681


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 199 TLVHGRRTVNR 167
           T+VH  RTVNR
Sbjct: 671 TVVHNDRTVNR 681


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 138 LMFEDDKYFNRFTVRLP 188
           ++  D+KYF+R T  +P
Sbjct: 414 VLLRDEKYFHRPTEFIP 430


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,804
Number of Sequences: 2352
Number of extensions: 2028
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 48
effective length of database: 451,083
effective search space used:  9923826
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)