Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11d24
(826 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 34 0.72
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 34 0.72
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 34 0.72
X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for ... 33 0.95
BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1 ... 33 0.95
BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein. 33 0.95
BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein. 33 0.95
BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein. 33 0.95
AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein. 33 0.95
AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2, tr... 33 0.95
AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2, tr... 33 0.95
AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2, tr... 33 0.95
AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2, tr... 33 0.95
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 31 5.1
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 5.1
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 31 5.1
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 30 8.8
M64594-1|AAA63230.1| 610|Homo sapiens mucin protein. 30 8.8
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 33.9 bits (74), Expect = 0.72
Identities = 41/185 (22%), Positives = 65/185 (35%), Gaps = 7/185 (3%)
Frame = -2
Query: 726 ASASRSINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIV--AAPA 553
AS+S I D S+ + T + N S T V++ E S S T V + P
Sbjct: 49 ASSSPPIADGTSMPTSTYSEGSTPLTN------MSFSTTPVVSSEASTLSTTPVDTSTPV 102
Query: 552 VVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEALV 373
+ S T A T + S G+ + + P V + S +T ++ LV
Sbjct: 103 TTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-VSTTPVVSSEVNTLSTTPVDSNTLV 161
Query: 372 SSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLSTKILADAVPEAVIVTAPEAETAIT 208
++ +E LST +A + + T + T +T
Sbjct: 162 TTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVASSEASTLSTTPVDTSTPVT 221
Query: 207 TGSPT 193
T SPT
Sbjct: 222 TSSPT 226
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 33.9 bits (74), Expect = 0.72
Identities = 41/185 (22%), Positives = 65/185 (35%), Gaps = 7/185 (3%)
Frame = -2
Query: 726 ASASRSINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIV--AAPA 553
AS+S I D S+ + T + N S T V++ E S S T V + P
Sbjct: 3318 ASSSPPIADGTSMPTSTYSEGSTPLTN------MSFSTTPVVSSEASTLSTTPVDTSTPV 3371
Query: 552 VVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEALV 373
+ S T A T + S G+ + + P V + S +T ++ LV
Sbjct: 3372 TTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-VSTTPVVSSEVNTLSTTPVDSNTLV 3430
Query: 372 SSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLSTKILADAVPEAVIVTAPEAETAIT 208
++ +E LST +A + + T + T +T
Sbjct: 3431 TTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVASSEASTLSTTPVDTSTPVT 3490
Query: 207 TGSPT 193
T SPT
Sbjct: 3491 TSSPT 3495
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 377 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 556
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 557 GAATIVLEPTDTSSLITS 610
A+T+ P D++S +T+
Sbjct: 822 EASTLSTTPVDSNSPVTT 839
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +2
Query: 443 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS--VA 616
T++ A+T+ P DTS+ IT+ ++ S TTT G + + P++ S L+TS V+
Sbjct: 760 TSSEASTLSTTPLDTSTHITTST-----EASCSPTTTEGTSMPISTPSEGSPLLTSIPVS 814
Query: 617 LAPV 628
+ PV
Sbjct: 815 ITPV 818
Score = 30.3 bits (65), Expect = 8.8
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +2
Query: 413 PVEDSIGSFTTTAG--AATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPT 586
P+ + + S T A A+T+ P DTS+ +T+ A ++ +S TT G + + P+
Sbjct: 2693 PLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSA-----EASSSPTTAEGTSMRISTPS 2747
Query: 587 DTSSLITSVALA--PVEDS 637
D S+ +TS+ ++ PV S
Sbjct: 2748 DGSTPLTSILVSTLPVASS 2766
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 33.9 bits (74), Expect = 0.72
Identities = 41/185 (22%), Positives = 65/185 (35%), Gaps = 7/185 (3%)
Frame = -2
Query: 726 ASASRSINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIV--AAPA 553
AS+S I D S+ + T + N S T V++ E S S T V + P
Sbjct: 3318 ASSSPPIADGTSMPTSTYSEGSTPLTN------MSFSTTPVVSSEASTLSTTPVDTSTPV 3371
Query: 552 VVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEALV 373
+ S T A T + S G+ + + P V + S +T ++ LV
Sbjct: 3372 TTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-VSTTPVVSSEVNTLSTTPVDSNTLV 3430
Query: 372 SSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLSTKILADAVPEAVIVTAPEAETAIT 208
++ +E LST +A + + T + T +T
Sbjct: 3431 TTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVASSEASTLSTTPVDTSTPVT 3490
Query: 207 TGSPT 193
T SPT
Sbjct: 3491 TSSPT 3495
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 377 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 556
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 557 GAATIVLEPTDTSSLITS 610
A+T+ P D++S +T+
Sbjct: 822 EASTLSTTPVDSNSPVTT 839
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +2
Query: 443 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITS--VA 616
T++ A+T+ P DTS+ IT+ ++ S TTT G + + P++ S L+TS V+
Sbjct: 760 TSSEASTLSTTPLDTSTHITTST-----EASCSPTTTEGTSMPISTPSEGSPLLTSIPVS 814
Query: 617 LAPV 628
+ PV
Sbjct: 815 ITPV 818
Score = 30.3 bits (65), Expect = 8.8
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +2
Query: 413 PVEDSIGSFTTTAG--AATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPT 586
P+ + + S T A A+T+ P DTS+ +T+ A ++ +S TT G + + P+
Sbjct: 2693 PLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSA-----EASSSPTTAEGTSMRISTPS 2747
Query: 587 DTSSLITSVALA--PVEDS 637
D S+ +TS+ ++ PV S
Sbjct: 2748 DGSTPLTSILVSTLPVASS 2766
>X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for
octamer-binding protein Oct-1. ).
Length = 743
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 434 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 613
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 614 ALAP 625
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 572 VLEPTDTSSLITS 610
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1
protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 434 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 613
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 614 ALAP 625
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 572 VLEPTDTSSLITS 610
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein.
Length = 561
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 434 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 613
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 374 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 430
Query: 614 ALAP 625
+L+P
Sbjct: 431 SLSP 434
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 450
Query: 572 VLEPTDTSSLITS 610
TS+ ++S
Sbjct: 451 TSTTQTTSTPLSS 463
>BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 434 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 613
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 614 ALAP 625
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 572 VLEPTDTSSLITS 610
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 434 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 613
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 614 ALAP 625
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 572 VLEPTDTSSLITS 610
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein.
Length = 755
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 434 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 613
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 478 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 534
Query: 614 ALAP 625
+L+P
Sbjct: 535 SLSP 538
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAA-T 568
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+ T
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 555
Query: 569 IVLEPTDT 592
++ T T
Sbjct: 556 STIQTTST 563
>AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 561
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 434 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 613
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 374 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 430
Query: 614 ALAP 625
+L+P
Sbjct: 431 SLSP 434
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 450
Query: 572 VLEPTDTSSLITS 610
TS+ ++S
Sbjct: 451 TSTTQTTSTPLSS 463
>AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 741
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 434 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 613
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 464 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 520
Query: 614 ALAP 625
+L+P
Sbjct: 521 SLSP 524
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 482 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 540
Query: 572 VLEPTDTSSLITS 610
TS+ ++S
Sbjct: 541 TSTTQTTSTPLSS 553
>AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 434 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 613
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 614 ALAP 625
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 572 VLEPTDTSSLITS 610
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 755
Score = 33.5 bits (73), Expect = 0.95
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 434 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 613
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 478 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 534
Query: 614 ALAP 625
+L+P
Sbjct: 535 SLSP 538
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 392 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 571
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 554
Query: 572 VLEPTDTSSLITS 610
TS+ ++S
Sbjct: 555 TSTTQTTSTPLSS 567
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 31.1 bits (67), Expect = 5.1
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +2
Query: 374 TNASSLITSVALAPVEDSIGS---FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITS- 541
+ S+ TS AP +I + TT+A A+ PT TSS T+ + S TS
Sbjct: 703 STTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSA 762
Query: 542 -FTTTAGAATIVLEPTDTSSLITS 610
T+T A T T +S I+S
Sbjct: 763 PITSTISAPTTSTTSTPQTSTISS 786
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 413 PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 583
PV + SF+ ++ AT V+ T+ SS + + + +TS T++GAAT P
Sbjct: 11702 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 11761
Query: 584 TDTSS 598
T T S
Sbjct: 11762 TLTHS 11766
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 413 PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 583
PV + SF+ ++ AT V+ T+ SS + + + +TS T++GAAT P
Sbjct: 3406 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 3465
Query: 584 TDTSS 598
T T S
Sbjct: 3466 TLTHS 3470
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +2
Query: 383 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGA 562
+ L T+ S + ++T G I+ EP+ T+++ AP + T+ +T A A
Sbjct: 3038 TELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATV-----TAPPGSTATASSTQATA 3092
Query: 563 ATIVLEPTDTSSLITSVALAP 625
T + T T+ +TS P
Sbjct: 3093 GTPHVSTTATTPTVTSSKATP 3113
>M64594-1|AAA63230.1| 610|Homo sapiens mucin protein.
Length = 610
Score = 30.3 bits (65), Expect = 8.8
Identities = 30/123 (24%), Positives = 49/123 (39%)
Frame = -2
Query: 735 SPGASASRSINDEVSVGSKTIVAAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAP 556
S G + + D SV + P V +STG + + D SV +
Sbjct: 341 STGHATPLHVTDASSVSTGDTTPLP---VTSPSSASTGDTTPLPVTDTSSVSTGDTTP-- 395
Query: 555 AVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVINDEAL 376
++V D ST + + + D SV + + P V DP +STG + + D +
Sbjct: 396 -LLVTDTSSVSTSHATSLPVTDTSSVSTSHATSLP---VTDPSSASTGDTTPLPVTDTSS 451
Query: 375 VSS 367
VS+
Sbjct: 452 VST 454
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,129,397
Number of Sequences: 237096
Number of extensions: 1628778
Number of successful extensions: 3721
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3674
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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