Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11d06
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2451|AAF49686.2| 333|Drosophila melanogaster CG17166-P... 190 1e-48
AY071425-1|AAL49047.1| 310|Drosophila melanogaster RE50565p pro... 151 8e-37
BT001848-1|AAN71609.1| 711|Drosophila melanogaster RH56418p pro... 47 3e-05
AE014134-2163|AAN10805.1| 690|Drosophila melanogaster CG5353-PC... 47 3e-05
AE014134-2162|AAF53167.1| 690|Drosophila melanogaster CG5353-PB... 47 3e-05
AE014134-2161|AAF53166.2| 747|Drosophila melanogaster CG5353-PA... 47 3e-05
AY119534-1|AAM50188.1| 747|Drosophila melanogaster GH20022p pro... 46 3e-05
BT011444-1|AAR99102.1| 967|Drosophila melanogaster RE49535p pro... 29 7.2
AE014297-2827|AAF55788.3| 919|Drosophila melanogaster CG15923-P... 29 7.2
AE014296-2963|AAF49303.1| 594|Drosophila melanogaster CG5589-PA... 29 7.2
>AE014296-2451|AAF49686.2| 333|Drosophila melanogaster CG17166-PA
protein.
Length = 333
Score = 190 bits (463), Expect = 1e-48
Identities = 93/188 (49%), Positives = 137/188 (72%), Gaps = 2/188 (1%)
Frame = -2
Query: 649 RTCSLMLGACATVAFKDTVPVHLHSFPLPDIRSGSFIYDVDLPTLSDWQPTHQEVLTLAA 470
RTCS MLGA AFK + LHSFP P+I+SGSF++D+ L T +W+P +E+ L+A
Sbjct: 137 RTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIVLQT-QNWEPGKEEMRALSA 195
Query: 469 EYVKLCRKAVPLERLEVGEELALEMFVDNEHKSKQIPNIA-KTNGKVILYRAGNHVDISR 293
E VKL + + +ERL+V ++LA EMF D+++KS+Q+P+I+ +TNG+V LYR G+H+DISR
Sbjct: 196 EMVKLAAQDLRIERLDVQQDLAQEMFKDSKYKSEQLPSISQQTNGRVTLYRLGDHIDISR 255
Query: 292 GPLISNTAQIGRLAVTAVHKLTGPTEDGVS-QLYRFQGVALPKGVVLDHFAFSILMDRAK 116
GP++++T+ +G+ ++A HK+ E+G S YR QGVALP G L+H AF +L +R+K
Sbjct: 256 GPMVASTSFLGKCVISAAHKV---AEEGPSGAFYRIQGVALPSGFQLNHVAFGVLEERSK 312
Query: 115 KLNPARSP 92
K +PAR P
Sbjct: 313 KPSPARLP 320
>AY071425-1|AAL49047.1| 310|Drosophila melanogaster RE50565p
protein.
Length = 310
Score = 151 bits (366), Expect = 8e-37
Identities = 69/141 (48%), Positives = 107/141 (75%), Gaps = 1/141 (0%)
Frame = -2
Query: 649 RTCSLMLGACATVAFKDTVPVHLHSFPLPDIRSGSFIYDVDLPTLSDWQPTHQEVLTLAA 470
RTCS MLGA AFK + LHSFP P+I+SGSF++D+ L T +W+P +E+ L+A
Sbjct: 137 RTCSFMLGAALNRAFKPEANLQLHSFPGPNIKSGSFVHDIVLQT-QNWEPGKEEMRALSA 195
Query: 469 EYVKLCRKAVPLERLEVGEELALEMFVDNEHKSKQIPNIA-KTNGKVILYRAGNHVDISR 293
E VKL + + +ERL+V ++LA EMF D+++KS+Q+P+I+ +TNG+V LYR G+H+DISR
Sbjct: 196 EMVKLAAQDLRIERLDVQQDLAQEMFKDSKYKSEQLPSISQQTNGRVTLYRLGDHIDISR 255
Query: 292 GPLISNTAQIGRLAVTAVHKL 230
GP++++T+ +G+ ++A HK+
Sbjct: 256 GPMVASTSFLGKCVISAAHKV 276
>BT001848-1|AAN71609.1| 711|Drosophila melanogaster RH56418p
protein.
Length = 711
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/132 (28%), Positives = 60/132 (45%)
Frame = -2
Query: 565 PDIRSGSFIYDVDLPTLSDWQPTHQEVLTLAAEYVKLCRKAVPLERLEVGEELALEMFVD 386
P I +G F YD+ L + + L + VK + ERLE+ + LEMF
Sbjct: 167 PPIENG-FYYDMHLEGEGISTNDYGAMEGLVKQIVK---EKQNFERLEMKKSDLLEMFKY 222
Query: 385 NEHKSKQIPNIAKTNGKVILYRAGNHVDISRGPLISNTAQIGRLAVTAVHKLTGPTEDGV 206
NE K + I N T + +Y+ G+ +D+ RGP + +T ++ L +T +
Sbjct: 223 NEFKVR-ILNEKVTTDRTTVYKCGSLIDLCRGPHVRHTGKVKALKITKNSSTYWEGKADA 281
Query: 205 SQLYRFQGVALP 170
L R G++ P
Sbjct: 282 ETLQRVYGISFP 293
>AE014134-2163|AAN10805.1| 690|Drosophila melanogaster CG5353-PC,
isoform C protein.
Length = 690
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/132 (28%), Positives = 60/132 (45%)
Frame = -2
Query: 565 PDIRSGSFIYDVDLPTLSDWQPTHQEVLTLAAEYVKLCRKAVPLERLEVGEELALEMFVD 386
P I +G F YD+ L + + L + VK + ERLE+ + LEMF
Sbjct: 146 PPIENG-FYYDMHLEGEGISTNDYGAMEGLVKQIVK---EKQNFERLEMKKSDLLEMFKY 201
Query: 385 NEHKSKQIPNIAKTNGKVILYRAGNHVDISRGPLISNTAQIGRLAVTAVHKLTGPTEDGV 206
NE K + I N T + +Y+ G+ +D+ RGP + +T ++ L +T +
Sbjct: 202 NEFKVR-ILNEKVTTDRTTVYKCGSLIDLCRGPHVRHTGKVKALKITKNSSTYWEGKADA 260
Query: 205 SQLYRFQGVALP 170
L R G++ P
Sbjct: 261 ETLQRVYGISFP 272
>AE014134-2162|AAF53167.1| 690|Drosophila melanogaster CG5353-PB,
isoform B protein.
Length = 690
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/132 (28%), Positives = 60/132 (45%)
Frame = -2
Query: 565 PDIRSGSFIYDVDLPTLSDWQPTHQEVLTLAAEYVKLCRKAVPLERLEVGEELALEMFVD 386
P I +G F YD+ L + + L + VK + ERLE+ + LEMF
Sbjct: 146 PPIENG-FYYDMHLEGEGISTNDYGAMEGLVKQIVK---EKQNFERLEMKKSDLLEMFKY 201
Query: 385 NEHKSKQIPNIAKTNGKVILYRAGNHVDISRGPLISNTAQIGRLAVTAVHKLTGPTEDGV 206
NE K + I N T + +Y+ G+ +D+ RGP + +T ++ L +T +
Sbjct: 202 NEFKVR-ILNEKVTTDRTTVYKCGSLIDLCRGPHVRHTGKVKALKITKNSSTYWEGKADA 260
Query: 205 SQLYRFQGVALP 170
L R G++ P
Sbjct: 261 ETLQRVYGISFP 272
>AE014134-2161|AAF53166.2| 747|Drosophila melanogaster CG5353-PA,
isoform A protein.
Length = 747
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/132 (28%), Positives = 60/132 (45%)
Frame = -2
Query: 565 PDIRSGSFIYDVDLPTLSDWQPTHQEVLTLAAEYVKLCRKAVPLERLEVGEELALEMFVD 386
P I +G F YD+ L + + L + VK + ERLE+ + LEMF
Sbjct: 203 PPIENG-FYYDMHLEGEGISTNDYGAMEGLVKQIVK---EKQNFERLEMKKSDLLEMFKY 258
Query: 385 NEHKSKQIPNIAKTNGKVILYRAGNHVDISRGPLISNTAQIGRLAVTAVHKLTGPTEDGV 206
NE K + I N T + +Y+ G+ +D+ RGP + +T ++ L +T +
Sbjct: 259 NEFKVR-ILNEKVTTDRTTVYKCGSLIDLCRGPHVRHTGKVKALKITKNSSTYWEGKADA 317
Query: 205 SQLYRFQGVALP 170
L R G++ P
Sbjct: 318 ETLQRVYGISFP 329
>AY119534-1|AAM50188.1| 747|Drosophila melanogaster GH20022p
protein.
Length = 747
Score = 46.4 bits (105), Expect = 3e-05
Identities = 37/132 (28%), Positives = 60/132 (45%)
Frame = -2
Query: 565 PDIRSGSFIYDVDLPTLSDWQPTHQEVLTLAAEYVKLCRKAVPLERLEVGEELALEMFVD 386
P I +G F YD+ L + + L + VK + ERLE+ + LEMF
Sbjct: 203 PPIENG-FYYDMHLEGEGISTNDYGAMEGLVKQIVK---EKQNFERLEMKKSDLLEMFKY 258
Query: 385 NEHKSKQIPNIAKTNGKVILYRAGNHVDISRGPLISNTAQIGRLAVTAVHKLTGPTEDGV 206
NE K + I N T + +Y+ G+ +D+ RGP + +T ++ L +T +
Sbjct: 259 NEFKVR-ILNEKVTTDRTTVYKCGSLIDLCRGPHVRHTGKVKALKITKNSPTYWEGKADA 317
Query: 205 SQLYRFQGVALP 170
L R G++ P
Sbjct: 318 ETLQRVYGISFP 329
>BT011444-1|AAR99102.1| 967|Drosophila melanogaster RE49535p
protein.
Length = 967
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 517 LSDWQPTHQEVLTLAAEYVKLCRKAVPLERLEVGEELALEMFVD 386
L W H E+L + + R A+P EV +L LE +D
Sbjct: 325 LKRWGAFHPEMLNMCQQKAPSLRVALPKRESEVSCQLTLERLID 368
>AE014297-2827|AAF55788.3| 919|Drosophila melanogaster CG15923-PA
protein.
Length = 919
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 517 LSDWQPTHQEVLTLAAEYVKLCRKAVPLERLEVGEELALEMFVD 386
L W H E+L + + R A+P EV +L LE +D
Sbjct: 336 LKRWGAFHPEMLNMCQQKAPSLRVALPKRESEVSCQLTLERLID 379
>AE014296-2963|AAF49303.1| 594|Drosophila melanogaster CG5589-PA
protein.
Length = 594
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -2
Query: 451 RKAVPLERLEVGEELALEMFVDNEHKSKQIPNIAKTNGKVILYRAGNHVDIS 296
R PL+R ++ ++ E D +HKS ++ + +T K++ R G D++
Sbjct: 510 RAKKPLDREDISTKIRPETKGDEKHKSTKLKKVERTE-KILKNRKGYEKDLN 560
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,106,762
Number of Sequences: 53049
Number of extensions: 686606
Number of successful extensions: 1740
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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