Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11d05
(667 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ062792-1|AAY56665.1| 186|Drosophila melanogaster unknown prot... 316 1e-86
AY113562-1|AAM29567.1| 185|Drosophila melanogaster RH08585p pro... 316 1e-86
AF160889-1|AAD46829.1| 185|Drosophila melanogaster GM04682p pro... 316 1e-86
AE014297-493|AAF54100.1| 185|Drosophila melanogaster CG2358-PA ... 316 1e-86
AE001572-23|AAD19813.1| 185|Drosophila melanogaster SPC 21-kDa-... 316 1e-86
M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lo... 31 1.9
AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p pro... 31 1.9
AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic ... 31 1.9
AE014298-3124|AAS65412.1| 1000|Drosophila melanogaster CG1391-PC... 31 1.9
AE014298-3123|AAS65411.1| 1240|Drosophila melanogaster CG1391-PD... 31 1.9
AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB... 31 1.9
AY060367-1|AAL25406.1| 299|Drosophila melanogaster LD22381p pro... 30 2.5
AF221109-1|AAF59840.1| 299|Drosophila melanogaster CHARYBDE pro... 30 2.5
AE014296-1956|AAF50060.2| 299|Drosophila melanogaster CG7533-PC... 30 2.5
BT003502-1|AAO39506.1| 1028|Drosophila melanogaster RE41896p pro... 29 5.7
AE013599-668|AAF59075.1| 952|Drosophila melanogaster CG14748-PA... 29 5.7
AY071099-1|AAL48721.1| 153|Drosophila melanogaster RE16005p pro... 29 7.5
AE014296-1868|AAF50120.2| 153|Drosophila melanogaster CG14147-P... 29 7.5
>DQ062792-1|AAY56665.1| 186|Drosophila melanogaster unknown
protein.
Length = 186
Score = 316 bits (777), Expect = 1e-86
Identities = 147/176 (83%), Positives = 163/176 (92%)
Frame = -2
Query: 639 ESLFDDVRRMNKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR 460
+ + D RMNKRQ +YQVLSF MIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR
Sbjct: 10 DEMLGDFNRMNKRQSLYQVLSFAMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR 69
Query: 459 GDLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDR 280
GDLLFLTNY EEPVRVGEIVVFKVEGRDIPIVHRV+KLHEK +G+VKFLTKGDNN+VDDR
Sbjct: 70 GDLLFLTNYKEEPVRVGEIVVFKVEGRDIPIVHRVIKLHEKEDGSVKFLTKGDNNNVDDR 129
Query: 279 GLYAQGQLWLTKKDVVGRARGFLPYVGMVTIYMNEYPKFKFAVLACLAIYVLVHRE 112
GLYA QLWLTKKD+VGRARGFLPYVG++TI+MNEYPK K+A+L+ LAI+VL+HRE
Sbjct: 130 GLYAPNQLWLTKKDIVGRARGFLPYVGIITIFMNEYPKVKWAILSILAIFVLLHRE 185
>AY113562-1|AAM29567.1| 185|Drosophila melanogaster RH08585p
protein.
Length = 185
Score = 316 bits (777), Expect = 1e-86
Identities = 147/176 (83%), Positives = 163/176 (92%)
Frame = -2
Query: 639 ESLFDDVRRMNKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR 460
+ + D RMNKRQ +YQVLSF MIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR
Sbjct: 10 DEMLGDFNRMNKRQSLYQVLSFAMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR 69
Query: 459 GDLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDR 280
GDLLFLTNY EEPVRVGEIVVFKVEGRDIPIVHRV+KLHEK +G+VKFLTKGDNN+VDDR
Sbjct: 70 GDLLFLTNYKEEPVRVGEIVVFKVEGRDIPIVHRVIKLHEKEDGSVKFLTKGDNNNVDDR 129
Query: 279 GLYAQGQLWLTKKDVVGRARGFLPYVGMVTIYMNEYPKFKFAVLACLAIYVLVHRE 112
GLYA QLWLTKKD+VGRARGFLPYVG++TI+MNEYPK K+A+L+ LAI+VL+HRE
Sbjct: 130 GLYAPNQLWLTKKDIVGRARGFLPYVGIITIFMNEYPKVKWAILSILAIFVLLHRE 185
>AF160889-1|AAD46829.1| 185|Drosophila melanogaster GM04682p
protein.
Length = 185
Score = 316 bits (777), Expect = 1e-86
Identities = 147/176 (83%), Positives = 163/176 (92%)
Frame = -2
Query: 639 ESLFDDVRRMNKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR 460
+ + D RMNKRQ +YQVLSF MIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR
Sbjct: 10 DEMLGDFNRMNKRQSLYQVLSFAMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR 69
Query: 459 GDLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDR 280
GDLLFLTNY EEPVRVGEIVVFKVEGRDIPIVHRV+KLHEK +G+VKFLTKGDNN+VDDR
Sbjct: 70 GDLLFLTNYKEEPVRVGEIVVFKVEGRDIPIVHRVIKLHEKEDGSVKFLTKGDNNNVDDR 129
Query: 279 GLYAQGQLWLTKKDVVGRARGFLPYVGMVTIYMNEYPKFKFAVLACLAIYVLVHRE 112
GLYA QLWLTKKD+VGRARGFLPYVG++TI+MNEYPK K+A+L+ LAI+VL+HRE
Sbjct: 130 GLYAPNQLWLTKKDIVGRARGFLPYVGIITIFMNEYPKVKWAILSILAIFVLLHRE 185
>AE014297-493|AAF54100.1| 185|Drosophila melanogaster CG2358-PA
protein.
Length = 185
Score = 316 bits (777), Expect = 1e-86
Identities = 147/176 (83%), Positives = 163/176 (92%)
Frame = -2
Query: 639 ESLFDDVRRMNKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR 460
+ + D RMNKRQ +YQVLSF MIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR
Sbjct: 10 DEMLGDFNRMNKRQSLYQVLSFAMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR 69
Query: 459 GDLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDR 280
GDLLFLTNY EEPVRVGEIVVFKVEGRDIPIVHRV+KLHEK +G+VKFLTKGDNN+VDDR
Sbjct: 70 GDLLFLTNYKEEPVRVGEIVVFKVEGRDIPIVHRVIKLHEKEDGSVKFLTKGDNNNVDDR 129
Query: 279 GLYAQGQLWLTKKDVVGRARGFLPYVGMVTIYMNEYPKFKFAVLACLAIYVLVHRE 112
GLYA QLWLTKKD+VGRARGFLPYVG++TI+MNEYPK K+A+L+ LAI+VL+HRE
Sbjct: 130 GLYAPNQLWLTKKDIVGRARGFLPYVGIITIFMNEYPKVKWAILSILAIFVLLHRE 185
>AE001572-23|AAD19813.1| 185|Drosophila melanogaster SPC
21-kDa-like protein.
Length = 185
Score = 316 bits (777), Expect = 1e-86
Identities = 147/176 (83%), Positives = 163/176 (92%)
Frame = -2
Query: 639 ESLFDDVRRMNKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR 460
+ + D RMNKRQ +YQVLSF MIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR
Sbjct: 10 DEMLGDFNRMNKRQSLYQVLSFAMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHR 69
Query: 459 GDLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDR 280
GDLLFLTNY EEPVRVGEIVVFKVEGRDIPIVHRV+KLHEK +G+VKFLTKGDNN+VDDR
Sbjct: 70 GDLLFLTNYKEEPVRVGEIVVFKVEGRDIPIVHRVIKLHEKEDGSVKFLTKGDNNNVDDR 129
Query: 279 GLYAQGQLWLTKKDVVGRARGFLPYVGMVTIYMNEYPKFKFAVLACLAIYVLVHRE 112
GLYA QLWLTKKD+VGRARGFLPYVG++TI+MNEYPK K+A+L+ LAI+VL+HRE
Sbjct: 130 GLYAPNQLWLTKKDIVGRARGFLPYVGIITIFMNEYPKVKWAILSILAIFVLLHRE 185
>M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lobes
protein protein.
Length = 1597
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 157 CCAGLSCNLCISTQGVTEALRSEVLGRE 74
C A + C++C S +G+ A+ E LGR+
Sbjct: 944 CAASVVCDICSSPRGLASAVLGEALGRK 971
>AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p protein.
Length = 1593
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 157 CCAGLSCNLCISTQGVTEALRSEVLGRE 74
C A + C++C S +G+ A+ E LGR+
Sbjct: 940 CAASVVCDICSSPRGLASAVLGEALGRK 967
>AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic lobes
protein.
Length = 1597
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 157 CCAGLSCNLCISTQGVTEALRSEVLGRE 74
C A + C++C S +G+ A+ E LGR+
Sbjct: 944 CAASVVCDICSSPRGLASAVLGEALGRK 971
>AE014298-3124|AAS65412.1| 1000|Drosophila melanogaster CG1391-PC,
isoform C protein.
Length = 1000
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 157 CCAGLSCNLCISTQGVTEALRSEVLGRE 74
C A + C++C S +G+ A+ E LGR+
Sbjct: 347 CAASVVCDICSSPRGLASAVLGEALGRK 374
>AE014298-3123|AAS65411.1| 1240|Drosophila melanogaster CG1391-PD,
isoform D protein.
Length = 1240
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 157 CCAGLSCNLCISTQGVTEALRSEVLGRE 74
C A + C++C S +G+ A+ E LGR+
Sbjct: 587 CAASVVCDICSSPRGLASAVLGEALGRK 614
>AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB,
isoform B protein.
Length = 1594
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 157 CCAGLSCNLCISTQGVTEALRSEVLGRE 74
C A + C++C S +G+ A+ E LGR+
Sbjct: 941 CAASVVCDICSSPRGLASAVLGEALGRK 968
>AY060367-1|AAL25406.1| 299|Drosophila melanogaster LD22381p
protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/86 (24%), Positives = 33/86 (38%)
Frame = -2
Query: 498 VVLSGSMEPAFHRGDLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVK 319
++ EP R LF+ + EP +V I FKV+ + I L L + +G
Sbjct: 209 IIRMSEREPCGERACTLFI-EFESEPNKVKRIAYFKVDPDTVSIFELYLTLRQDKSGWSS 267
Query: 318 FLTKGDNNSVDDRGLYAQGQLWLTKK 241
+ + N + LTKK
Sbjct: 268 LVPQFIKNLTRSNTINISPDFTLTKK 293
>AF221109-1|AAF59840.1| 299|Drosophila melanogaster CHARYBDE
protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/86 (24%), Positives = 33/86 (38%)
Frame = -2
Query: 498 VVLSGSMEPAFHRGDLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVK 319
++ EP R LF+ + EP +V I FKV+ + I L L + +G
Sbjct: 209 IIRMSEREPCGERACTLFI-EFESEPNKVKRIAYFKVDPDTVSIFELYLTLRQDKSGWSS 267
Query: 318 FLTKGDNNSVDDRGLYAQGQLWLTKK 241
+ + N + LTKK
Sbjct: 268 LVPQFIKNLTRSNTINISPDFTLTKK 293
>AE014296-1956|AAF50060.2| 299|Drosophila melanogaster CG7533-PC
protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/86 (24%), Positives = 33/86 (38%)
Frame = -2
Query: 498 VVLSGSMEPAFHRGDLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVK 319
++ EP R LF+ + EP +V I FKV+ + I L L + +G
Sbjct: 209 IIRMSEREPCGERACTLFI-EFESEPNKVKRIAYFKVDPDTVSIFELYLTLRQDKSGWSS 267
Query: 318 FLTKGDNNSVDDRGLYAQGQLWLTKK 241
+ + N + LTKK
Sbjct: 268 LVPQFIKNLTRSNTINISPDFTLTKK 293
>BT003502-1|AAO39506.1| 1028|Drosophila melanogaster RE41896p
protein.
Length = 1028
Score = 29.1 bits (62), Expect = 5.7
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 511 KPNSSSTVRQYGASFSQRRLAV--FNQLP*GACPRWRNCCLQSRGPGYPDCSQSIETT*K 338
K +SSS+ +G + SQRR FN GA R N L G GY D +
Sbjct: 452 KHSSSSSSSYWGLTESQRRKDQHDFNYFQLGAPHRESNSVLSYPGSGYEDDYPRRRNDYR 511
Query: 337 EQW 329
+QW
Sbjct: 512 QQW 514
>AE013599-668|AAF59075.1| 952|Drosophila melanogaster CG14748-PA
protein.
Length = 952
Score = 29.1 bits (62), Expect = 5.7
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 511 KPNSSSTVRQYGASFSQRRLAV--FNQLP*GACPRWRNCCLQSRGPGYPDCSQSIETT*K 338
K +SSS+ +G + SQRR FN GA R N L G GY D +
Sbjct: 376 KHSSSSSSSYWGLTESQRRKDQHDFNYFQLGAPHRESNSVLSYPGSGYEDDYPRRRNDYR 435
Query: 337 EQW 329
+QW
Sbjct: 436 QQW 438
>AY071099-1|AAL48721.1| 153|Drosophila melanogaster RE16005p
protein.
Length = 153
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 523 YYHQTFPYHQGRRHYHTKA*HLVHELPLVHSPH 621
Y+H+ P+ +H+ HL H LVH H
Sbjct: 30 YHHEELPHLLDAEIHHSDGIHLGHSAALVHDDH 62
>AE014296-1868|AAF50120.2| 153|Drosophila melanogaster CG14147-PA
protein.
Length = 153
Score = 28.7 bits (61), Expect = 7.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 523 YYHQTFPYHQGRRHYHTKA*HLVHELPLVHSPH 621
Y+H+ P+ +H+ HL H LVH H
Sbjct: 30 YHHEELPHLLDAEIHHSDGIHLGHSAALVHDDH 62
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,107,379
Number of Sequences: 53049
Number of extensions: 654045
Number of successful extensions: 1683
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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