Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11d03
(626 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 155 7e-39
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 70 2e-13
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 58 1e-09
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 56 4e-09
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 53 3e-08
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 51 2e-07
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 50 3e-07
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 42 6e-05
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 41 2e-04
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 41 2e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 41 2e-04
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 37 0.003
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 36 0.005
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 35 0.011
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 31 0.10
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 31 0.10
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 31 0.18
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 28 0.96
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 28 1.3
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 27 1.7
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 5.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 5.1
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 26 5.1
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 155 bits (375), Expect = 7e-39
Identities = 79/167 (47%), Positives = 108/167 (64%), Gaps = 3/167 (1%)
Frame = -1
Query: 590 DFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 417
D+ARTRLA D K G+R+F+GL + K ++SDGL GLYRGFG SV GI++YR YF
Sbjct: 154 DYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYF 213
Query: 416 GFYDTARG-MLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILY 240
G YDT + +L P + S+ + VTT +G+ SYP DT+RRRMMM SG A + Y
Sbjct: 214 GMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTSGEA---VKY 270
Query: 239 KNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 99
++ C I EG +FFKGA +N+LRG GA VL +YD+++ ++
Sbjct: 271 SSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSIYDQVQLLM 317
Score = 33.5 bits (73), Expect = 0.026
Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 7/127 (5%)
Frame = -1
Query: 533 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVIS 354
+ G+G C + +G+I L+RG +V +A F F D + M K
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAK 130
Query: 353 WAIAQTVT-TVAGIIS----YPFDTVRRRMMMQSGRAK--SDILYKNTIHCWATIAKTEG 195
W + AG S Y D R R+ + AK + + + + +++G
Sbjct: 131 WFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDG 190
Query: 194 TSAFFKG 174
++G
Sbjct: 191 LRGLYRG 197
Score = 27.5 bits (58), Expect = 1.7
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -1
Query: 389 LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDIL---YKNTIHCW 219
+ + KN+ + + V+ + P + V+ + Q ++ L YK C+
Sbjct: 19 ITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECF 78
Query: 218 ATIAKTEGTSAFFKGAFSNVLR 153
A EG + ++G +NVLR
Sbjct: 79 KRTAAEEGVISLWRGNTANVLR 100
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 70.1 bits (164), Expect = 2e-13
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Frame = -1
Query: 536 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML-PDPKNTPIV 360
+++G +C +KI K + ++ LY GF ++ +++ A YFG R L P +
Sbjct: 140 KYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIRNSLTPASSRIGEI 199
Query: 359 ISWAIAQTVTTVAG-IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAF 183
+ IA T+ + G +S PFD ++ R+ A Y T+A+ EG +A
Sbjct: 200 RNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTAL 259
Query: 182 FKGAFSNVLR-GTGGAFVLVLYDEI 111
+KG VLR G GG +LV+++ +
Sbjct: 260 YKGFVPKVLRLGPGGGILLVVFNSV 284
Score = 44.8 bits (101), Expect = 1e-05
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 3/144 (2%)
Frame = -1
Query: 596 PXDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 417
P D +TR+ VGK D ++G +C+ KI K++G LYRG + RA F
Sbjct: 28 PLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKF 83
Query: 416 GFYDTARGM---LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDI 246
DT + + K++ +S + PF+ ++ R+ +K
Sbjct: 84 ASNDTYSKLWRKVFKRKDSSPALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK--- 140
Query: 245 LYKNTIHCWATIAKTEGTSAFFKG 174
Y T+ C+ I K E A + G
Sbjct: 141 -YNGTVDCFTKIVKQERILALYNG 163
Score = 38.7 bits (86), Expect = 7e-04
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = -1
Query: 374 NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 198
N P +++A A V ++ +++ YP D V+ RM + G KSD Y T C I K E
Sbjct: 5 NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59
Query: 197 GTSAFFKGAFSNVL 156
G ++G +L
Sbjct: 60 GPHRLYRGILPPIL 73
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 58.0 bits (134), Expect = 1e-09
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 11/177 (6%)
Frame = -1
Query: 596 PXDFARTR--LAADVGKGD-GQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 426
P + +TR L + K D +R + +G S I + +G+ GL RG G + I
Sbjct: 43 PFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNG 102
Query: 425 SYFGFYDTAR-----GMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR 261
GFY+ R L DPK + I+ A + PF V+ RM S +
Sbjct: 103 CRLGFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLCGALFGSPFFLVKTRMQSYSPK 162
Query: 260 --AKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV-LVLYDEIKKVL 99
YK+ + ++ I K G F GA + +LR G+ V L +Y+ K+++
Sbjct: 163 FPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMI 219
Score = 39.1 bits (87), Expect = 5e-04
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Frame = -1
Query: 542 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPI 363
Q + + N S+I K +G+ GL+ G ++ + + Y+ A+ M+
Sbjct: 168 QYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMIEHYNLLEE 227
Query: 362 VISWAIAQTVTTVAGIISYP--FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTS 189
+ + + + G+ FDTV RM Q K+ LYKN I C ++EG
Sbjct: 228 GMIKHLTASAVSGFGVCCTMQIFDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFF 283
Query: 188 AFFKGAFSNVLR 153
A +KG +++ R
Sbjct: 284 ALYKGFGAHLAR 295
Score = 29.1 bits (62), Expect = 0.55
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 518 NCISKIFKSDGLIGLYRGFGVSVQGI 441
+CI K +S+G LY+GFG + I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 56.0 bits (129), Expect = 4e-09
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Frame = -1
Query: 596 PXDFARTRLAADVGKGDGQREFSG-LGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 420
P D +TR+ G R SG + N + KI ++G+ L+RG + G A Y
Sbjct: 39 PVDAIKTRMQMLNGVS---RSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHAIY 95
Query: 419 FGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILY 240
F + + + + P+ + A A +T ++ PFD +++RM + S + Y
Sbjct: 96 FSVLEFFKSKINASPDRPLASALAGACAIT-ISDAFMTPFDVIKQRMQLPSRK------Y 148
Query: 239 KNTIHCWATIAKTEGTSAFF 180
K+ +HC T+ + EG AF+
Sbjct: 149 KSALHCATTVFRNEGLGAFY 168
Score = 32.7 bits (71), Expect = 0.045
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Frame = -1
Query: 539 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML-PDPKNTPI 363
R++ +C + +F+++GL Y + + I + A YDT L P+ P
Sbjct: 146 RKYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTCMSFLNPNAVYDPT 205
Query: 362 --VISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDI-LYKNTIHCWATIAKTEGT 192
+IS ++ +A ++ P D V+ + + + ++ K ++ I G
Sbjct: 206 SHIISGGLS---GAIASSLTTPLDVVKTLLQTRGSSSIPEVRKCKGSLDVVRFIYNYGGI 262
Query: 191 SAFFKG 174
+FFKG
Sbjct: 263 PSFFKG 268
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 53.2 bits (122), Expect = 3e-08
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Frame = -1
Query: 503 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV 324
I +G+ GLYRG +V F Y++ + L +S V +V
Sbjct: 153 IVHENGIRGLYRGLAATVARQAANSGVRFTAYNSIKQSLQSRLPPDEKLSTVTTFLVGSV 212
Query: 323 AGIISY----PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVL 156
AGII+ P DTV+ RM QS A + YKN+IHC I +G F+ GA +
Sbjct: 213 AGIITVYCTQPIDTVKSRM--QSLSASKE--YKNSIHCAYKILTQDGLLRFWSGATPRLA 268
Query: 155 R-GTGGAFVLVLYDEIKKVL 99
R G V +Y+++ ++L
Sbjct: 269 RLILSGGIVFTVYEKVMEIL 288
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 50.8 bits (116), Expect = 2e-07
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Frame = -1
Query: 596 PXDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 420
P D + R+ +D+ +G + L N +++KS G+ G YRG V + G+ Y A+
Sbjct: 248 PVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGVLVGILGMFPYSATD 305
Query: 419 FGFYD----TARGMLP-----DPKNT--PIVISWAIAQTVTTVAGIISYPFDTVRRRMMM 273
G ++ T G+L DP++ P + A + I +P + +R R+
Sbjct: 306 LGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGATIVFPLNVIRTRLQT 365
Query: 272 QSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 99
Q G + Y I C+ K EG +KG N+L+ A ++Y+ KK L
Sbjct: 366 Q-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKKWL 423
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 50.0 bits (114), Expect = 3e-07
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Frame = -1
Query: 536 EFSGLGNCISKIFKSDGLI-GLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIV 360
+++G+ C S I +G+ GLY G + G + A +F Y+ + L N P
Sbjct: 51 KYNGMVKCYSTILCEEGVFHGLYSGVCPMLIGSLPATALFFSSYEYTKRHLMSNYNLPET 110
Query: 359 ISWAIAQTVTTV-AGIISYPFDTVRRRMMMQ----SGRAKSDILYKNTIHCWATIAKTEG 195
+ + +A V + A ++ P + ++ R+ +Q + +S+ Y + IAK EG
Sbjct: 111 LCFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEG 170
Query: 194 TSAFFKGAFSNVLRGTG-GAFVLVLYDEIKKV 102
FF G + +LR F L+ Y+++++V
Sbjct: 171 MKTFFYGYRATILRDIPFSGFQLLFYEKLRQV 202
Score = 33.9 bits (74), Expect = 0.019
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 527 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 405
G+ + + ++KS+GL+GL+RGFG + + F FY+
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 42.3 bits (95), Expect = 6e-05
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = -1
Query: 518 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQ 339
N IS + +S+GL G YRG+ + V + S++ Y+ ++ L N I + I
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICS 180
Query: 338 TV-TTVAGIISYPFDTVRRRMMMQSGRA 258
+ T VA IS P D V+ R + + A
Sbjct: 181 ALGTVVATTISTPLDIVKTRYQVATSSA 208
Score = 33.5 bits (73), Expect = 0.026
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Frame = -1
Query: 500 FKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVA 321
FK+ L YRG +S+ I Y Y A+ ++ T V+
Sbjct: 38 FKTMPLKAYYRGLPISLTLITPATCLYLSTYVEAKRRFKPSVGEGAILYSICGMTAEVVS 97
Query: 320 GIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNV-LRGTG 144
+ P + ++ R + K ++ NTI +T+A++EG F++G + V +
Sbjct: 98 SFVWTPLEVIKARTQISQ---KGSVI--NTI---STLARSEGLKGFYRGYWMGVAIYLPT 149
Query: 143 GAFVLVLYDEIKKVL 99
V Y+E KK L
Sbjct: 150 TVSWWVCYEESKKYL 164
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 40.7 bits (91), Expect = 2e-04
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Frame = -1
Query: 533 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLP---DPKNTPI 363
++ + + I I+K +G+ G +RGFGV+ + Y FY+ ++ L D +
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSKQNLHKLFDRFSPSS 200
Query: 362 VISWAI--AQTVTTVAGIIS--------YPFDTVRRRMMMQSGRAKSDILYKNTIHCWAT 213
+ + V ++G+IS PFD ++ R+ ++ +YKN +H
Sbjct: 201 SVQGTVPHRNIVNVMSGLISGATATAITNPFDMLKTRVQLEPH------IYKNFLHSAKL 254
Query: 212 IAKTEGTSAFFKGAFSNVLR 153
+ EG F G F VLR
Sbjct: 255 VYANEGFRGFLDGFFLRVLR 274
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 40.7 bits (91), Expect = 2e-04
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Frame = -1
Query: 491 DGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD-----PKNTPI-VISWAIAQTVT 330
+G L+RG G ++ G I R+ F Y + +L D +N+ I +++ AIA +T
Sbjct: 117 EGTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQENSQIHLMAAAIAGVIT 176
Query: 329 TVAGIISYPFDTVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVL 156
+ A + P V+ R+ + +SG+A Y+++I C + EG +KG +++L
Sbjct: 177 SAA---TNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYKGLSASLL 230
Query: 155 RGTGGAFVLVLYDEIK 108
VLY++ K
Sbjct: 231 GVGESTLQWVLYEKFK 246
Score = 38.7 bits (86), Expect = 7e-04
Identities = 43/174 (24%), Positives = 67/174 (38%), Gaps = 14/174 (8%)
Frame = -1
Query: 608 ASCTPXDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI---I 438
A+ P +TRL D G + S + +CI K + +G GLY+G S+ G+
Sbjct: 178 AATNPIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSASLLGVGEST 236
Query: 437 IYRASYFGFYDTARGMLPDPKNTPI-------VISW----AIAQTVTTVAGIISYPFDTV 291
+ Y F K I V+ W A +A I+YP + V
Sbjct: 237 LQWVLYEKFKHAVAIRQLRRKELGIQETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVV 296
Query: 290 RRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVL 129
R R + QS Y I C+ + +G + G +++LR A +L
Sbjct: 297 RTR-LRQSPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACIL 349
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 40.7 bits (91), Expect = 2e-04
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Frame = -1
Query: 518 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVI-SWAIA 342
+C+ KI K++GL Y+G + + GI + F ++ + TP+ + + ++
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFF-SRDGTPVTMPQYYVS 118
Query: 341 QTVTTVA-GIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFS 165
++ +A + P + VR R+ +Q+G+ ++LY C I+ G S KG
Sbjct: 119 GAISGLANSFLVGPVEHVRIRLQIQTGK---NVLYHGPWDCIKKISSQYGLSGIMKGYNP 175
Query: 164 NVLRGTGG-AFVLVLYDEIKK 105
R G + Y+ + K
Sbjct: 176 TAAREAHGLGMYFLAYEALVK 196
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 317 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 174
++ PFD V+ R+ QS + +Y N + C I+K EG +AF+KG
Sbjct: 33 LVGQPFDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG 77
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 36.7 bits (81), Expect = 0.003
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = -1
Query: 506 KIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT 327
KI+K +GL YRG S+ G ++ F Y+ + L D +A T++
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFKSFLDDFFGKKSNFHIVLAATLSK 297
Query: 326 V-AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRG 150
+ A ++YP + +R R +QS A + + + I ++EG ++ G +N +R
Sbjct: 298 IAASTVTYPHEVLRTR--LQSLDAPT---HNSATLLIRDIWRSEGWRKYYSGMATNFIRT 352
Query: 149 TGGAFVLVLYDEI 111
+ V L EI
Sbjct: 353 IPASSVTFLSFEI 365
Score = 29.9 bits (64), Expect = 0.31
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 242 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 99
Y NT + I K EG +AF++G F ++ LY+ K L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 35.9 bits (79), Expect = 0.005
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = -1
Query: 527 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML-PDPKNTPIVISW 351
GL I I+ GL GLY+G ++ + Y F Y+ R +L DP++ +
Sbjct: 61 GLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRF 120
Query: 350 AIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNT 231
T + +YP + +R R+ + K+ L + T
Sbjct: 121 LSGSLAGTCSVFFTYPLELIRVRLAYITNTGKNPTLTQVT 160
Score = 33.5 bits (73), Expect = 0.026
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 13/117 (11%)
Frame = -1
Query: 485 LIGLYRGFGVSVQGIIIYRASYFGFYDTARGM---------LPDPKNTPIVISW--AIAQ 339
+ YRGF V++ GI Y F YD A + K+ + +W +
Sbjct: 184 ICNFYRGFSVTLTGIFPYAGMSFLAYDLATDFFHKQKIDEWVSTKKSDKKLKTWPELLCG 243
Query: 338 TVTTVAG-IISYPFDTVRRRMMMQSGRA-KSDILYKNTIHCWATIAKTEGTSAFFKG 174
V G +SYPF+ RR+M + R KS + K + T K G FF G
Sbjct: 244 AFAGVCGQTVSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQ---TTYKEAGMRGFFVG 297
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 34.7 bits (76), Expect = 0.011
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 14/167 (8%)
Frame = -1
Query: 611 CASCTPXDFARTRLAADV-GKGDGQREFSGLGNCISKIFK-------------SDGLIGL 474
CA+ P D ARTRL+ + G + + N K+ G L
Sbjct: 130 CATTYPLDIARTRLSIETAGLTSRSLAINNVANNSLKVKPLTLWSTLLYIVQHEGGYPAL 189
Query: 473 YRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDT 294
Y G ++ ++ Y + F ++ + + + + +++P D
Sbjct: 190 YNGLPATLLNVVPYVSICFFTFEFCKQKFFSNADLTAFQKLFLGGFTGIIGQTLTFPADV 249
Query: 293 VRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 153
+RRR + YKN I KTEG + FF+G SN+L+
Sbjct: 250 LRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
Score = 33.5 bits (73), Expect = 0.026
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 596 PXDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 417
P D R R + G G + + + I I+K++G+ G +RG+ ++ II + +
Sbjct: 246 PADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
Query: 416 GFYDTARGMLPD 381
Y+T ML D
Sbjct: 305 YTYETVSKMLHD 316
Score = 33.1 bits (72), Expect = 0.034
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = -1
Query: 539 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML------PDP 378
+E++ L + + KI+ +GLIG +RG G + Y A F ++ + +
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNRSHQNL 113
Query: 377 KNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTI 228
+N ++ AIA + +YP D R R+ +++ S L N +
Sbjct: 114 ENHERLLFGAIAGAASCAT---TYPLDIARTRLSIETAGLTSRSLAINNV 160
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.5 bits (68), Expect = 0.10
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 533 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 396
F + +C K++GL GLYRG + + + R+ F YD+ +
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 31.5 bits (68), Expect = 0.10
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 3/166 (1%)
Frame = -1
Query: 596 PXDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 417
P D A+ ++ A + + D + F S I + + LY G ++V G +YF
Sbjct: 20 PLDLAKIQMQASMNQ-DSKSLFQVFK---SNIGSNGSIRSLYHGLSINVLGSAASWGAYF 75
Query: 416 GFYDTARG--MLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSD-I 246
YD ++ M P N + ++ QT+ + +G + + + R S +
Sbjct: 76 CIYDFSKRVVMSMTPFNNGEI---SVLQTLCS-SGFAGCIVAALTNPIWVVKSRILSKRV 131
Query: 245 LYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIK 108
Y N + + K EG + G ++L + GA + Y+++K
Sbjct: 132 NYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVSQGALQFMAYEKLK 177
Score = 30.7 bits (66), Expect = 0.18
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = -1
Query: 503 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV 324
+ K++GL G Y GF S+ G + A F Y+ + + P + + + V
Sbjct: 143 LIKNEGLRGCYAGFAPSLLG-VSQGALQFMAYEKLKLW---KQRRPTSLDYIFMSAASKV 198
Query: 323 -AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 153
A + YP +R R+ + +S + + W + +G F+KG ++LR
Sbjct: 199 FAAVNMYPLLVIRTRLQVMRSPHRS--IMNLVLQTW----RLQGILGFYKGFLPHLLR 250
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 30.7 bits (66), Expect = 0.18
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -1
Query: 596 PXDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 417
P + AR + + + KG Q G+ I I+K++G+ GLYRG V G+ Y+
Sbjct: 224 PLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRG-AVPRMGLGAYQTFVM 280
Query: 416 GFY-DTARGML 387
F D RG L
Sbjct: 281 VFLADCVRGYL 291
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 28.3 bits (60), Expect = 0.96
Identities = 17/83 (20%), Positives = 37/83 (44%)
Frame = -1
Query: 530 SGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISW 351
S L + + +G+ L+RG V+ ++Y A+ F + + + + +++
Sbjct: 49 SSLRPVFKETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHLTENLAMNDHAVNF 108
Query: 350 AIAQTVTTVAGIISYPFDTVRRR 282
+ A + SYP DT+R +
Sbjct: 109 LCGTSAGIFATLTSYPLDTMRTK 131
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 527 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDP 378
G G ++I+K G GL+ G GV + I + + YD+ + M P
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDSFKIMCGFP 307
Score = 26.6 bits (56), Expect = 2.9
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Frame = -1
Query: 503 IFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR---GMLPDPKNT---PIVISWAIA 342
I +GL GLY G ++ G + +GFY+ + L + I A +
Sbjct: 68 ILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAAS 127
Query: 341 QTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 174
+ +A I+ P + ++ R+ + R T W+ I EG ++G
Sbjct: 128 ASAELLADIMLCPMEAIKVRVQTSNPR-----FANTTREAWSKIVTNEGFGTLYRG 178
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -1
Query: 512 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 387
+ +I+K +G+ G +G G+ V + + Y G Y+ + L
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYEHVKSHL 247
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 395 GMLPDPKNTPIVISWAIAQTVTTV 324
GMLPDPK+ P++ +T V
Sbjct: 89 GMLPDPKSIPVISQALTKYKITDV 112
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 124 KTSTKAPPVPLRTLEKAPL 180
K S+KAPPVPL + + P+
Sbjct: 1016 KLSSKAPPVPLPSADAPPI 1034
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -1
Query: 461 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG 318
G+ + G+I+ + Y+T R M+P P +S + T+ G
Sbjct: 12 GIPICGVILLILWGYSLYNTLRFMVPGKATEPFTLSLSDVSDDTSAPG 59
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,172,664
Number of Sequences: 5004
Number of extensions: 39694
Number of successful extensions: 177
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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