Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11c22
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 250 7e-67
02_01_0160 + 1116160-1116678 244 4e-65
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 239 1e-63
09_06_0359 + 22508900-22509439 235 2e-62
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 215 2e-56
10_01_0309 + 3417602-3418147 203 1e-52
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 188 3e-48
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 180 9e-46
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 178 3e-45
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 161 4e-40
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 151 3e-37
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 123 4e-37
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 146 1e-35
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 135 2e-32
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 126 1e-29
06_01_0214 + 1634171-1634173,1634263-1634742 126 2e-29
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 101 4e-22
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 98 6e-21
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 64 4e-15
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 77 2e-14
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 65 5e-11
08_02_0053 + 11721658-11721689,11721960-11722710 60 1e-09
02_01_0086 + 613113-613532 58 6e-09
01_01_0077 - 585670-585787,585921-586687 50 2e-06
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 45 4e-05
10_01_0310 + 3425099-3425218 38 0.009
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 9.5
01_01_0662 - 5052390-5053022,5053182-5053319,5053429-5053656,505... 27 9.5
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 250 bits (612), Expect = 7e-67
Identities = 117/165 (70%), Positives = 136/165 (82%), Gaps = 4/165 (2%)
Frame = -3
Query: 585 NQVYFDVTAD---GEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDF 415
N+VYFD++ G+ +GR+VI L D+VP+TAENFRALCTGEKGFGYKGSSFHR+I DF
Sbjct: 83 NKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDF 142
Query: 414 MCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTP 235
M QGGDF NGTGGKSIYGRTF DENFKL HTGPG++SMANAGPNTNGSQFFI TV TP
Sbjct: 143 MIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTP 202
Query: 234 WLDRKHVVFGSVVEGMDVVQKMEKLGSKSG-KPIKKVVISDSGEL 103
WLD +HVVFG V+EGMD+V+ +E + G +P KKVVIS+ GEL
Sbjct: 203 WLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKKVVISECGEL 247
>02_01_0160 + 1116160-1116678
Length = 172
Score = 244 bits (598), Expect = 4e-65
Identities = 114/169 (67%), Positives = 133/169 (78%), Gaps = 7/169 (4%)
Frame = -3
Query: 588 DNQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHR 430
+ +V+FD+T G P GRIV++L +VP+TAENFRALCTGEKG G YKGS+FHR
Sbjct: 3 NTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHR 62
Query: 429 IIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFIT 250
+IP+FMCQGGDFT NGTGG+SIYG F+DE FK KH PGILSMANAGPNTNGSQFFI
Sbjct: 63 VIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFIC 122
Query: 249 TVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSGEL 103
TVP WLD KHVVFG VVEGMDVV+ +EK+GS+ G K VVI+D G+L
Sbjct: 123 TVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGGSTAKPVVIADCGQL 171
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 239 bits (585), Expect = 1e-63
Identities = 116/172 (67%), Positives = 134/172 (77%), Gaps = 7/172 (4%)
Frame = -3
Query: 597 TQPDNQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSS 439
T+ ++VYFDV DG+P GR+V+ L VPKTAENFRALCTGEKG G +KGS+
Sbjct: 47 TEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSA 106
Query: 438 FHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQF 259
FHRIIP FM QGGDFT +G GG+SIYG F+DENFK+KHTGPG+LSMANAG +TNGSQF
Sbjct: 107 FHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQF 166
Query: 258 FITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSGEL 103
FITTV T WLD KHVVFG V+ GMDVV K+E G +SG P KVVI+DSGEL
Sbjct: 167 FITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGSPKSKVVIADSGEL 218
>09_06_0359 + 22508900-22509439
Length = 179
Score = 235 bits (575), Expect = 2e-62
Identities = 113/174 (64%), Positives = 133/174 (76%), Gaps = 7/174 (4%)
Frame = -3
Query: 603 ASTQPDNQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKG 445
AS P +V+FD+ GR+V++L D VPKTAENFR LCTGEKG G YKG
Sbjct: 2 ASKNP--KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKG 59
Query: 444 SSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGS 265
S+FHRIIP+FMCQGGDFT NGTGG+SIYG F+DENFKL+HTGPG+LSMANAGPNTNGS
Sbjct: 60 SAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGS 119
Query: 264 QFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSGEL 103
QFFI T T WLD KHVVFG VV+G VV+KME++GS SG ++V+I D G+L
Sbjct: 120 QFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGGTAERVLIEDCGQL 173
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 215 bits (525), Expect = 2e-56
Identities = 107/172 (62%), Positives = 126/172 (73%), Gaps = 7/172 (4%)
Frame = -3
Query: 597 TQPDNQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSS 439
T+ +V+FD+T +G+P GRIV+ L + VPKTAENFRA+CTGEKG G YKG+
Sbjct: 36 TKVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTP 95
Query: 438 FHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQF 259
FHRIIP FM QGGD + NGTG SIYG F DENFK+ H+ PG+LSMAN +TNGSQF
Sbjct: 96 FHRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQF 155
Query: 258 FITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSGEL 103
FITTV LD KHVVFG V+ GMDVV K+E GS+SG P KV+ISDSGEL
Sbjct: 156 FITTVKLTRLDGKHVVFGKVLSGMDVVYKIEAEGSQSGTPRSKVLISDSGEL 207
>10_01_0309 + 3417602-3418147
Length = 181
Score = 203 bits (495), Expect = 1e-52
Identities = 98/177 (55%), Positives = 124/177 (70%), Gaps = 10/177 (5%)
Frame = -3
Query: 603 ASTQPDNQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKG-------FGYKG 445
AS++ + +V+ D+ GE +GR+VI+L D+VP TAENFR LCTGE+ YKG
Sbjct: 5 ASSKSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKG 64
Query: 444 SSFHRIIPDFMCQGGDFTNHNGTGGKSIY---GRTFSDENFKLKHTGPGILSMANAGPNT 274
S+FHR++P FMCQGGD T NGTGG+S R F DE F +KH GPG++SMANAGPNT
Sbjct: 65 SAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNT 124
Query: 273 NGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSGEL 103
NGSQFFIT PWLD +HV FG VV GM V+ +++ G+ SGK +K VVI+D G L
Sbjct: 125 NGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVVITDCGVL 181
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 188 bits (458), Expect = 3e-48
Identities = 84/115 (73%), Positives = 96/115 (83%)
Frame = -3
Query: 588 DNQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMC 409
+++ +FDV GEP GRIVI L + VPKT +NFRALCTG+KG+GYKG SFHRII DFM
Sbjct: 65 NSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFMI 124
Query: 408 QGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 244
QGGDF N+NGTGG+SIYG F DENF LKHTGPG+LSMANAGP+TNGSQFFI TV
Sbjct: 125 QGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTV 179
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 180 bits (438), Expect = 9e-46
Identities = 98/181 (54%), Positives = 115/181 (63%), Gaps = 23/181 (12%)
Frame = -3
Query: 576 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGY------------------ 451
Y DV+ G+ GRIV++L P+TAENFRALCTGEKG
Sbjct: 36 YLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLKAASVC 95
Query: 450 ----KGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAG 283
KGS HRI+ FM QGGD T +GTGG+SIYG F DENF LKH G+LSMANAG
Sbjct: 96 TRWTKGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAG 155
Query: 282 PNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLG-SKSGKPIKKVVISDSGE 106
P+TNGSQFFITT TP LD KHVVFG V++GM VV+ ME + +S +PI +VI D GE
Sbjct: 156 PDTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGE 215
Query: 105 L 103
L
Sbjct: 216 L 216
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 178 bits (434), Expect = 3e-45
Identities = 95/175 (54%), Positives = 115/175 (65%), Gaps = 11/175 (6%)
Frame = -3
Query: 579 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG--------YKGSSFHRII 424
V+ DV+ EP R+V +L D P+TAENFRALCTGE G G YKGS FHR+I
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 423 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 244
FM QGGDF+N +G+GG+SIYG TF DENF L+H G+LSMANAGPNTNGSQFFIT
Sbjct: 69 KGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFITFK 128
Query: 243 PTPWLDRKHVVFGSVVEGMDVVQKME--KLGSKSGKPIKKVVISDSGEL-D*SCL 88
LDRK VFG ++ G DV++++E + P+ V I D GEL D CL
Sbjct: 129 HNSRLDRKSTVFGKLILGNDVLKRIEYVDVHGAGSTPVVPVRIVDCGELVDGKCL 183
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 161 bits (391), Expect = 4e-40
Identities = 88/169 (52%), Positives = 109/169 (64%), Gaps = 8/169 (4%)
Frame = -3
Query: 585 NQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRI 427
N+VY DV DG+ +GRIVI L D VPKT NFRALCTGE+G G YKGS FHRI
Sbjct: 38 NRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRI 97
Query: 426 IPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITT 247
IP FM QGGD +G G +++MAN+GP++NGSQF+ITT
Sbjct: 98 IPGFMIQGGDIVRGDGKG---------------------SVIAMANSGPDSNGSQFYITT 136
Query: 246 VPTPWLDRKHVVFGSVVEGMDVVQKME-KLGSKSGKPIKKVVISDSGEL 103
+ T WLD +HVVFG V++GMD V +E G+ +GKP KKVVI+DSGE+
Sbjct: 137 IKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEI 185
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 151 bits (367), Expect = 3e-37
Identities = 82/144 (56%), Positives = 99/144 (68%), Gaps = 2/144 (1%)
Frame = -3
Query: 546 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 367
+G I ++L +E PKT ENF C G+ Y FHR+I FM Q GD +GTGG+
Sbjct: 504 MGDIHLRLYPEECPKTVENFTTHC--RNGY-YDNLIFHRVIKGFMIQTGDPLG-DGTGGQ 559
Query: 366 SIYGRTFSDENFK-LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 190
SI+GR F DE K L+H P LSMANAGPNTNGSQFFITTV TPWLD KH VFG VV+G
Sbjct: 560 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKG 619
Query: 189 MDVVQKMEKLGS-KSGKPIKKVVI 121
MDVVQ++EK+ + K+ KP + V I
Sbjct: 620 MDVVQQIEKVKTDKNDKPYQDVKI 643
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 123 bits (296), Expect(2) = 4e-37
Identities = 70/132 (53%), Positives = 79/132 (59%), Gaps = 24/132 (18%)
Frame = -3
Query: 579 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGE---KGF--GYKGSSFHRIIPDF 415
V+FDVT P GRI ++L D VPKTAENFR CTGE G GYKG FHR+I DF
Sbjct: 39 VFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDF 98
Query: 414 MCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSM-------------------A 292
M QGGD+ +GTG SIYG F DENF KHTGPG+LSM A
Sbjct: 99 MIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRSYYIYIKLEQDIEASSKA 158
Query: 291 NAGPNTNGSQFF 256
N+G N+NGSQ F
Sbjct: 159 NSGVNSNGSQIF 170
Score = 49.6 bits (113), Expect(2) = 4e-37
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = -3
Query: 264 QFFITTVPTPWLDRKHVVFGSVV-EGMDVVQKMEKLGS-KSGKPIKKVVISDSGEL 103
QFFIT WLD KHVVFG V+ +GM V+K+E + + + +P VIS+ GE+
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISECGEM 255
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 146 bits (355), Expect = 1e-35
Identities = 73/122 (59%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Frame = -3
Query: 465 KGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANA 286
K F +GS FHR+I FM QGGD T +GTGG+SIYG F DENF LKH G+LSMAN+
Sbjct: 113 KIFHVQGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANS 172
Query: 285 GPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLG-SKSGKPIKKVVISDSG 109
GPNTNGSQFFITT TP LD KHVVFG V++GM VV+ +E ++ +P V I D G
Sbjct: 173 GPNTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVEHAPVGEADRPTSDVEIVDCG 232
Query: 108 EL 103
EL
Sbjct: 233 EL 234
Score = 62.1 bits (144), Expect = 4e-10
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = -3
Query: 630 IYSAAALRFASTQPDNQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG- 454
+ SAAA P + + DV+ GE GRIVI+L VP+TAENFRALCTGEKG G
Sbjct: 13 VASAAAAEVEVKNP--RCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVGA 70
Query: 453 YKGSSFHRIIPDFMCQGGDFTN-HNGTGGKSI 361
G H DF DF N H+ T G+ +
Sbjct: 71 VTGKHLH--YKDF---DADFINMHSETFGRLV 97
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 135 bits (327), Expect = 2e-32
Identities = 74/144 (51%), Positives = 93/144 (64%), Gaps = 2/144 (1%)
Frame = -3
Query: 546 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 367
+G I++ PKT NF L +G+ Y FHRII DF+ QGGD T G GG+
Sbjct: 18 MGAFTIEMYYKHAPKTCRNFLEL--SRRGY-YDNVIFHRIIKDFIVQGGDPTG-TGRGGE 73
Query: 366 SIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 190
SIYG F DE +LKHTG GILSMANAGPNTNGSQFFIT P LD KH +FG V +G
Sbjct: 74 SIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFGRVSKG 133
Query: 189 MDVVQKMEKLGS-KSGKPIKKVVI 121
M++V+++ + + KS +PI +V I
Sbjct: 134 MEIVKRLGSVQTDKSDRPIHEVKI 157
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 126 bits (304), Expect = 1e-29
Identities = 68/143 (47%), Positives = 93/143 (65%), Gaps = 2/143 (1%)
Frame = -3
Query: 543 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 364
G + ++L+ D P+T ENF C E G+ Y G FHR I +FM QGGD T G+GG+S
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC--ENGY-YNGLIFHRSIKNFMIQGGDPTG-TGSGGES 409
Query: 363 IYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 187
I+G+ F DE N KL H+G G++SMAN+GP+TNGSQFFI P L+ KH VFG VV G+
Sbjct: 410 IWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGL 469
Query: 186 DVVQKMEKLG-SKSGKPIKKVVI 121
+ MEK+ +P++++ I
Sbjct: 470 TTLSAMEKVPVDDDDRPLEEIKI 492
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 126 bits (303), Expect = 2e-29
Identities = 68/142 (47%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Frame = -3
Query: 546 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 367
LG I ++ D+ P+TAENF ALC G+ Y G+ FHR I FM QGGD T G GG
Sbjct: 9 LGDIKCEVFCDQAPRTAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGDPTG-TGKGGT 64
Query: 366 SIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 190
SI+G+ F+DE LKH G++SMAN+GPNTNGSQFFIT P L+ + VF V+ G
Sbjct: 65 SIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTVFAKVIHG 124
Query: 189 MDVVQKMEKLGSKSG-KPIKKV 127
+V+ MEK + G +P+ ++
Sbjct: 125 FEVLDLMEKAQTGPGDRPLAEI 146
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 101 bits (243), Expect = 4e-22
Identities = 55/117 (47%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Frame = -3
Query: 543 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 364
G + I+L E PK NF LC +G+ Y G+ FHR+I F+ QGGD T +GTGG+S
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQGGDPTG-SGTGGES 77
Query: 363 IYGRTFSDE-NFKLKHTGPGILSMANAG-PNTNGSQFFITTVPTPWLDRKHVVFGSV 199
IYG F+DE + +L+ G+++ ANAG P++NGSQFFI+ WLD+K+ +FG V
Sbjct: 78 IYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFGKV 134
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 97.9 bits (233), Expect = 6e-21
Identities = 64/159 (40%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Frame = -3
Query: 546 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 367
+G I + L+TD P T +NF LC K Y G FH++ DF+ Q GD T G GG
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLC---KMKYYNGCLFHKVEKDFLAQTGDPTG-TGAGGD 64
Query: 366 SIY-------GRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFIT-TVPTPWLDRKHV 214
S+Y R F DE L+H+ G ++MA+AG N N SQF+IT +LD KH
Sbjct: 65 SVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHT 124
Query: 213 VFGSVVEGMDVVQKM-EKLGSKSGKPIKKVVISDSGELD 100
VFG V EG D + K+ E G+P K + I + LD
Sbjct: 125 VFGMVAEGFDTLTKISETYVDDKGRPFKDIRIKHTYVLD 163
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 63.7 bits (148), Expect(2) = 4e-15
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = -3
Query: 354 RTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVP-TPWLDRKHVVFGSVVEGMDV 181
R F DE + +L+H+ G ++MA+AG N N SQF+IT +LD KH VFG V EG D
Sbjct: 106 RFFDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDT 165
Query: 180 VQKM-EKLGSKSGKPIKKVVISDSGELD 100
+ K+ E G+P K + I + LD
Sbjct: 166 ITKINETYVDDKGRPFKDIRIRHTYVLD 193
Score = 35.1 bits (77), Expect(2) = 4e-15
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 546 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPD--FMCQGGDFTNHNGTG 373
+G I + L+TD P T +NF LC G +G G +F + + + C+ G +
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRKQLSGQFWRCRAGATGSGFDVK 68
Query: 372 GKSIYGRTF 346
G S G +F
Sbjct: 69 GMSFPGYSF 77
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 76.6 bits (180), Expect = 2e-14
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = -3
Query: 543 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 364
G I I++ D + F +LC K +KG F +I +F+ QGGDF + NG +
Sbjct: 103 GSITIEIYKDASADVVDRFVSLC---KSNHFKGMPFRHVIKNFVIQGGDF-DFNGAAQEW 158
Query: 363 IYGRTFSDEN-FKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 187
I S EN KH I + N PN G FITT P P L+ K VVFG V+ G
Sbjct: 159 ILKAKASGENALSPKHEAFMIGTTKN--PNNKGFDLFITTAPIPDLNDKLVVFGQVINGQ 216
Query: 186 DVVQKMEKL 160
D+VQ++E++
Sbjct: 217 DIVQEIEEV 225
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 64.9 bits (151), Expect = 5e-11
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Frame = -3
Query: 579 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG--------YKGSSFHRII 424
V+FD+ G RI +L D VPKT ENFRALCTGE+G G +KG++ HRI+
Sbjct: 10 VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHRIL 69
Query: 423 PDFMCQ 406
FM Q
Sbjct: 70 KGFMAQ 75
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Frame = -3
Query: 243 PTPWLD------RKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSGEL 103
PTP+L+ KHVVFG VV GM +++K+E +GS +GKP +V I D GE+
Sbjct: 81 PTPFLNVSTSCVSKHVVFGKVVTGMPLLKKLEAVGSDTGKPTCEVKIVDCGEV 133
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Frame = -3
Query: 558 DGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNG 379
D EPLGR++ L +P T NF+A CT Y+G+ H+++ G
Sbjct: 123 DSEPLGRVIFGLYGRLLPLTTANFKAACTSA---AYRGTLVHKLLQGQFFVAGRQGPRRD 179
Query: 378 TG------GKSIYGRTFSDENFKLKHTGPGILSMA----------NAGPNTNGSQFFITT 247
G G T + F+LKH PG LS+ PN + +F +TT
Sbjct: 180 RGEVQPPTGLVRNAETIDPKAFELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTT 239
Query: 246 --VPTPWLDRKHVVFGSVVEG 190
P P LD +++VFG+V+EG
Sbjct: 240 GPGPCPELDGQNIVFGTVLEG 260
>02_01_0086 + 613113-613532
Length = 139
Score = 58.0 bits (134), Expect = 6e-09
Identities = 43/122 (35%), Positives = 57/122 (46%)
Frame = -3
Query: 531 IKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGR 352
++L D VP TAENFRAL T +K YKG + P +G + R
Sbjct: 1 MELYADLVPLTAENFRALYT-KKPLHYKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRR 59
Query: 351 TFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQK 172
+ENF L H P + N N SQFF T V PW D +VVFG ++ G ++
Sbjct: 60 HLPNENFLLPHDRPW---LPNGSAENNISQFF-TRV--PWFDGNYVVFGCIISGFHNLKA 113
Query: 171 ME 166
+E
Sbjct: 114 IE 115
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 481 SVYW*KRFWVQGFIIS*NNTRLHVSRWRFYQSQRYRRKVYLRAYL 347
++Y K +G +S + R+HV R Q +RR+V+LR +L
Sbjct: 17 ALYTKKPLHYKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRRHL 61
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 50.0 bits (114), Expect = 2e-06
Identities = 58/179 (32%), Positives = 74/179 (41%), Gaps = 27/179 (15%)
Frame = -3
Query: 624 SAAALRFASTQPDNQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTG----EKGF 457
+AAA A + + DV+ GEP GRI I L D P A F +L TG K F
Sbjct: 62 AAAAPCIADLPVTAKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTGVGYRRKEF 121
Query: 456 -----GYK---GSSFHRIIPDFMCQ------------GGDFTNHNGTGGKSIYGRTFSDE 337
GY G + IP + GG+ + H G SI R S
Sbjct: 122 VKIVPGYVQHGGVVSYPAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDPSLP 181
Query: 336 NFKLKHTGPG---ILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKM 169
K K G + G NG++F ITT P LD +V G VV+GMDV+ K+
Sbjct: 182 PPKPKLVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKI 240
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -3
Query: 327 LKHTGPGILSMA-NAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSK 151
+KH GILSM ++ PN+ GS F I P LD ++ VFG + +G D ++K+E+L ++
Sbjct: 157 VKHVR-GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLEQLPTR 215
>10_01_0310 + 3425099-3425218
Length = 39
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3
Query: 543 GRIVIKLNTDEVPKTAENFRALCTG 469
G +VI+ D+VPKT ENFR +CTG
Sbjct: 8 GSVVIEQFADKVPKTTENFRPMCTG 32
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 168 PFSAQHPYLQPQTQILHVFYPT 233
P ++ HPY+ P T +L + +PT
Sbjct: 2366 PITSIHPYILPATSLLELQFPT 2387
>01_01_0662 -
5052390-5053022,5053182-5053319,5053429-5053656,
5053736-5054035,5054568-5054636
Length = 455
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 200 WLKVWMLCRKWKNLVLKVVNQ 138
WL+ WM R W+N +++ NQ
Sbjct: 290 WLERWMAARPWENRLMEEHNQ 310
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,814,470
Number of Sequences: 37544
Number of extensions: 366148
Number of successful extensions: 872
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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