Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11c19
(693 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 184 4e-47
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 181 6e-46
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 170 1e-42
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 79 3e-15
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 77 1e-14
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 67 1e-11
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 67 1e-11
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 65 6e-11
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 59 3e-09
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 46 2e-05
12_02_0652 - 21527768-21528328,21528980-21529738,21530151-215302... 33 0.28
03_02_0004 - 4869853-4871106 29 4.6
09_04_0285 + 16390786-16391291,16391370-16391957,16392034-163921... 28 8.1
05_07_0206 - 28405109-28406671 28 8.1
04_04_1349 - 32811733-32813040 28 8.1
02_04_0045 - 19205992-19206318 28 8.1
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 8.1
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 184 bits (449), Expect = 4e-47
Identities = 90/168 (53%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
Frame = -1
Query: 630 GVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEE 451
GV PDIVTMAKGIGNG PL AVVTT EIA + YFNTFGGNP+ + G AVL V+E+
Sbjct: 296 GVVPDIVTMAKGIGNGIPLGAVVTTPEIAQVLTRRCYFNTFGGNPLCTAGGLAVLRVLEK 355
Query: 450 EGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELV-EPGTKTPLTTSKVNDI 274
EGLQ N+ VG Y +L LQ +H +IGDVRG G M+GVELV + KTP ++
Sbjct: 356 EGLQANAHAVGSYLKDRLRALQDKHEIIGDVRGTGFMLGVELVTDRQLKTP-AKDEICRA 414
Query: 273 HENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIKKV 130
E++K+ GVL+ +GG + NVFRI PP+C TK+D DF +++++ A+ K+
Sbjct: 415 MEHMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADFFVAVMDSALSKL 462
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 691 DGXXTXFXRTGDHFWGFETH 632
D F R G HFWGFETH
Sbjct: 276 DEVQAGFARVGSHFWGFETH 295
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 181 bits (440), Expect = 6e-46
Identities = 84/167 (50%), Positives = 119/167 (71%)
Frame = -1
Query: 630 GVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEE 451
GV PDIVTMAKGIGNG P+ AVVTT EIA + +YFNTFGGNP+++ G AVL+V+E+
Sbjct: 318 GVIPDIVTMAKGIGNGIPIGAVVTTPEIAQVLTRRSYFNTFGGNPVSTAGGHAVLKVLEK 377
Query: 450 EGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIH 271
E LQ+N+ VVG Y +L L+++H +IGDVRG+G ++GVELV K ++ +
Sbjct: 378 EKLQENAFVVGSYLKERLNKLKEKHDIIGDVRGKGFLLGVELVTDRQKKTPAKVEIGHVM 437
Query: 270 ENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIKKV 130
++KD GVL+ +GG + NVFR+ PP+C TK+D DF I ++ ++ K+
Sbjct: 438 NHMKDMGVLVGKGGFYGNVFRVTPPLCFTKEDSDFFIEAMDISLSKL 484
Score = 31.1 bits (67), Expect = 0.87
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 667 RTGDHFWGFETH 632
RTG HFWGFE+H
Sbjct: 306 RTGSHFWGFESH 317
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 170 bits (413), Expect = 1e-42
Identities = 85/164 (51%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
Frame = -1
Query: 627 VKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEE 448
V PDIVTMAKGIGNG PL AVVTT EIA A+ FNTFGGNP+ S G AVL+V+++E
Sbjct: 321 VIPDIVTMAKGIGNGLPLGAVVTTPEIANVLAQKIQFNTFGGNPVCSVGGLAVLKVLDKE 380
Query: 447 GLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELV-EPGTKTPLTTSKVNDIH 271
Q + VG + + +L +LQ++H +IGDVRG+GLM+GVELV + KTP ++ N +
Sbjct: 381 KRQAHCADVGSHLVNRLKELQQKHEIIGDVRGRGLMLGVELVTDRKEKTP-AKAETNLLF 439
Query: 270 ENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAI 139
E +KD +L+ +GG NVFRIKPPMC T+ D D+ + ++ A+
Sbjct: 440 EKLKDLNILVGKGGLHGNVFRIKPPMCFTRDDADYLVDAMDYAM 483
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 691 DGXXTXFXRTGDHFWGFET 635
D + F RTG H+WGF+T
Sbjct: 300 DEVQSGFGRTGSHYWGFQT 318
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 79.4 bits (187), Expect = 3e-15
Identities = 47/164 (28%), Positives = 84/164 (51%)
Frame = -1
Query: 630 GVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEE 451
GV PDI+T+AK + G P+ V+ T+++A+ + TFGG P+ L+ I++
Sbjct: 305 GVLPDIMTLAKPLAGGLPIGVVLVTEKVASAINFGDHGTTFGGGPLVCQAALTTLDKIQK 364
Query: 450 EGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIH 271
G GE F + L + + ++RG GL++G+EL P PL + +
Sbjct: 365 PGFLAEVAKKGENFKQLLSTKLSGNAHVKEIRGIGLIVGIELDVPA--GPLVDACL---- 418
Query: 270 ENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAI 139
D GV++ G+ NV R+ PP+ I++++++ +I D +
Sbjct: 419 ----DRGVIVLTAGK-GNVVRLVPPLIISEKELEQAAEVIRDCL 457
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 77.0 bits (181), Expect = 1e-14
Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Frame = -1
Query: 627 VKPDIVTMAKGIGNGF-PLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEE 451
++PD+V + K +G G P++AV+ K+I + +TFGGNP+AS V A L+V+ +
Sbjct: 284 IRPDVVILGKALGAGVVPVSAVLADKDIMLCIKPGEHGSTFGGNPLASAVAVASLKVVTD 343
Query: 450 EGLQQNSKVVGEY-----------------FIRQLMDLQKQHP-VIGDVRGQGLMIGVEL 325
EGL ++ +V EY F QL +Q++ P +I +VRG+GL+ V+L
Sbjct: 344 EGLVESCMIVYEYLSSKHLLNYRAAKLGQEFRDQLQKVQQRFPQIIREVRGRGLLNAVDL 403
Query: 324 VEPGTKTPLTTSKVNDIHENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIIND 145
+ L+ + DI +K+ GVL + + R+ PP+ I+ +++ +D
Sbjct: 404 ----SNEALSPASAYDICIKLKERGVLAK--PTHDTIIRLAPPLSISPEELAEASKAFSD 457
Query: 144 AIK 136
++
Sbjct: 458 VLE 460
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 67.3 bits (157), Expect = 1e-11
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 11/175 (6%)
Frame = -1
Query: 627 VKPDIVTMAKGIGNGF-PLAAVVTTKEIAA---NHAKA----AYFNTFGGNPMASTVGKA 472
+KPD+V++AK + + + P+ A++ + EI+ +H+ A+ T+ G+P++ V
Sbjct: 221 IKPDLVSLAKALSSAYAPIGAILVSPEISDVIHSHSNKLGTFAHGFTYSGHPVSCAVALE 280
Query: 471 VLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVE---PGTKTP 301
L++ E + + V + F + P++G+ RG GL+I E + P P
Sbjct: 281 ALKIYRERDIPGHVTHVAQRFQEGIKAFAAGSPIVGETRGVGLLIATEFTDNKSPYELFP 340
Query: 300 LTTSKVNDIHENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIK 136
+ K G+++ G N+ + PP+ IT++++D +SI +A+K
Sbjct: 341 FEWGVGEIFGQECKKRGMMVKVLG---NLIAMSPPLIITREEIDKLVSIYGEALK 392
>04_04_1143 + 31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 66.9 bits (156), Expect = 1e-11
Identities = 45/175 (25%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Frame = -1
Query: 627 VKPDIVTMAKGIGNGF-PLAAVVTTKEIA-ANHAKA------AYFNTFGGNPMASTVGKA 472
+KPD+V+MAK + + + P+ A++ + EI+ H+++ A+ T+ G+P+A V
Sbjct: 775 IKPDLVSMAKALSSAYVPIGAIMVSPEISDVIHSQSNKLGSFAHGFTYSGHPVACAVAIE 834
Query: 471 VLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVE---PGTKTP 301
L++ +E + + K + F ++ + P++G++RG GL++G E + P P
Sbjct: 835 ALKIYQERNIPDHVKQISPRF-QEGVKAFAGSPIVGEIRGVGLILGTEFADNKSPNDPFP 893
Query: 300 LTTSKVNDIHENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIK 136
+ G+L+ G +N+ + PP+ +T +V+ +SI DA+K
Sbjct: 894 AEWGVGAIFGAECQKRGMLVRVAG--DNIM-MSPPLIMTPDEVEELVSIYGDALK 945
Score = 57.6 bits (133), Expect = 9e-09
Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Frame = -1
Query: 627 VKPDIVTMAKGIGNGF-PLAAVVTTKEIA----ANHAKAAYFN---TFGGNPMASTVGKA 472
+KPD+V++AK + + + P+ A + + EI+ + K +F T+ G+P++ V
Sbjct: 284 IKPDLVSLAKALSSAYVPIGATLVSPEISDVVHSQSNKIGFFAHGFTYSGHPVSCAVALE 343
Query: 471 VLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVE---PGTKTP 301
L++ E + + K + F + +IG+ RG GL++ E P P
Sbjct: 344 ALKIYRERNIPAHVKQISPRFQEGIKAFAGSS-IIGETRGVGLLLATEFANNKSPNDPFP 402
Query: 300 LTTSKVNDIHENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIK 136
+ K G+L+ G + + PP+ +++++VD +SI +A+K
Sbjct: 403 VEWGVAQIFGAECKKRGMLVKVVG---DEIAMSPPLIMSQREVDGLVSIYGEALK 454
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/105 (31%), Positives = 55/105 (52%)
Frame = -1
Query: 630 GVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEE 451
GV PDI+T+AK + G P+ V+ T+++A+ + TFGG P+ L+ I++
Sbjct: 316 GVVPDIMTLAKPLAGGLPIGVVLVTEKVASAINYGDHGTTFGGGPLVCQAALTTLDKIQK 375
Query: 450 EGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEP 316
G GE F + L + + ++RG GL++G+EL P
Sbjct: 376 PGFLAEVAKKGENFKQLLSTKLSGNAHVKEIRGIGLIVGIELDVP 420
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 59.3 bits (137), Expect = 3e-09
Identities = 43/175 (24%), Positives = 88/175 (50%), Gaps = 11/175 (6%)
Frame = -1
Query: 627 VKPDIVTMAKGIGNGF-PLAAVVTTKEIA------ANHAKA-AYFNTFGGNPMASTVGKA 472
+KPD+V++AK + + + P+ A++ + EI +N + A+ T+ G+P++ V
Sbjct: 370 IKPDLVSIAKALSSAYMPIGAILVSPEITDVIYSQSNKLGSFAHGFTYSGHPVSCAVAIE 429
Query: 471 VLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVE---PGTKTP 301
L++ +E + ++ + + F + P++G++RG GL++G E V+ P P
Sbjct: 430 ALKIYKERNIIEHVQKIAPRFQEGIKAFSGS-PIVGEIRGLGLILGTEFVDNKSPNDPFP 488
Query: 300 LTTSKVNDIHENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIK 136
+ + G+LI G +N+ + PP+ +T +V+ I DA+K
Sbjct: 489 AEWGVGSLFGAECEKRGMLIRVAG--DNIM-LSPPLIMTPDEVEEIICKYGDALK 540
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 46.4 bits (105), Expect = 2e-05
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Frame = -1
Query: 648 GASRRTGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAA---YFNTFGGNPMASTVG 478
GA G+ PD+ T+ K IG G P+ A K+I A A T GNP+A T G
Sbjct: 302 GAQEYFGITPDVSTLGKIIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAG 361
Query: 477 KAVLEVIEEEGLQQN-SKVVGEYFIRQLMD--LQKQHPVI-GDVRGQ-GLMIGVELVEP- 316
L+ + E G K+ G+ +R ++D + H + G +RG G V
Sbjct: 362 IHTLKRLMEPGTYDYLDKITGD-LVRGVLDAGAKTGHEMCGGHIRGMFGFFFTAGPVHNF 420
Query: 315 GTKTPLTTSKVNDIHENIKDNGVLIA 238
G T+K + + + GV +A
Sbjct: 421 GDAKKSDTAKFGRFYRGMLEEGVYLA 446
>12_02_0652 -
21527768-21528328,21528980-21529738,21530151-21530216,
21530550-21530598,21530717-21530817,21531469-21531540,
21531630-21531746,21531870-21531959,21532224-21532319,
21532429-21532482,21533210-21533290,21533382-21533581,
21533677-21533804,21533943-21533995,21534312-21534374
Length = 829
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 477 KAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPG 313
K +I E Q+N +V GEY R ++KQ + D+ G+ M+ ELV G
Sbjct: 606 KTATAIIPAELEQKNGEVDGEYIKRLKSFVEKQCNEMQDLLGRNAMLAEELVRTG 660
>03_02_0004 - 4869853-4871106
Length = 417
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +2
Query: 164 PKSTSCLVMHIGGFILNTLLKRPPRAMSTPLSLIFSWISLTLEVVS-GVLVPGSTSSTPI 340
P S L H IL T + P A +T W +L +S G L+P +
Sbjct: 198 PTDASDLASHATVDILTTATEASPTASAT-----LQWTHGSLNALSWGFLLPVGAAVARY 252
Query: 341 MRPCPLTSP 367
+RPC T P
Sbjct: 253 LRPCASTGP 261
>09_04_0285 +
16390786-16391291,16391370-16391957,16392034-16392160,
16392291-16392477,16392585-16392741,16392847-16393201
Length = 639
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 468 LEVIEEEG--LQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTK 307
++ ++EE +Q+ K VG+ ++ DLQ IG V G+ L ++L++ +K
Sbjct: 290 MDKLKEEAVDIQREIKTVGDSMSTKMQDLQSTANDIGSVAGKSLENQMQLLDGQSK 345
>05_07_0206 - 28405109-28406671
Length = 520
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 280 INFGSGQRCLSSGFNKLHSDHEALSPDIANHWVLLLKIHQLP 405
I FGSG +C S+ + L S + A + N W+ +IH+ P
Sbjct: 472 IAFGSGFKCNSAVWRALRSVNPAKENNFTNPWI--DEIHRFP 511
>04_04_1349 - 32811733-32813040
Length = 435
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 346 ALSPDIANHWVLLL--KIHQLPDEVFADYLTVLLQSFFFNNLQYSFSNSRSHRVSTESVK 519
A SP + + W L L + H LPD + D + +FF L +S + S S+ S+
Sbjct: 98 APSPPLPSSWFLRLLSESHSLPDSAWRDAFRMSRPAFF--QLLHSLALSDPAAASSSSLA 155
Query: 520 VGSLRVIGCYLF 555
+ +G LF
Sbjct: 156 LPPDHKLGAALF 167
>02_04_0045 - 19205992-19206318
Length = 108
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 687 GXQPASVALEIISGASRRTGVKPD-IVTMAKGIGNGFPLAAVVT 559
G +PA+VAL+++ S T KP+ A G PLA + T
Sbjct: 21 GRRPAAVALQLLQVQSSSTTTKPEKKAAAAAAAGGRRPLAPLAT 64
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 287 LEVVSGVLVPGSTSSTPIMRPCPLTSPITGCCF*RSINC 403
+E + + +P S +P P P + CC R+I+C
Sbjct: 1 MEAAASLPLPASRFLSPPPHPTPAAAAAAACCSRRNISC 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,156,726
Number of Sequences: 37544
Number of extensions: 393429
Number of successful extensions: 1252
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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