Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11c17
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK022674-1|BAB14170.1| 264|Homo sapiens protein ( Homo sapiens ... 194 3e-49
AC073476-4|AAY24152.1| 264|Homo sapiens unknown protein. 194 3e-49
AK222879-1|BAD96599.1| 264|Homo sapiens COP9 constitutive photo... 188 2e-47
BC011789-1|AAH11789.1| 275|Homo sapiens COPS7A protein protein. 185 1e-46
AK022488-1|BAB14052.1| 275|Homo sapiens protein ( Homo sapiens ... 185 1e-46
AF210052-1|AAF19205.1| 275|Homo sapiens COP9 complex subunit 7a... 185 1e-46
AF193844-1|AAF04307.1| 275|Homo sapiens COP9 complex subunit 7a... 185 1e-46
AB033603-1|BAA85390.1| 275|Homo sapiens cop9 complex subunit 7a... 185 1e-46
AB014764-1|BAB87805.1| 275|Homo sapiens DERP10 (dermal papilla ... 185 1e-46
AK001318-1|BAA91620.1| 275|Homo sapiens protein ( Homo sapiens ... 184 3e-46
BC091493-1|AAH91493.1| 273|Homo sapiens COPS7B protein protein. 179 9e-45
BC093015-1|AAH93015.1| 248|Homo sapiens COPS7A protein protein. 173 6e-43
BC010739-1|AAH10739.2| 166|Homo sapiens COPS7B protein protein. 146 8e-35
AK024273-1|BAB14868.1| 157|Homo sapiens protein ( Homo sapiens ... 137 4e-32
AK126326-1|BAC86526.1| 171|Homo sapiens protein ( Homo sapiens ... 124 4e-28
CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein. 44 4e-04
BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation ... 44 4e-04
BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1... 44 4e-04
AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5 p... 44 4e-04
AF277183-1|AAK07542.1| 206|Homo sapiens PNAS-125 protein. 44 4e-04
AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein ... 44 5e-04
AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein. 43 8e-04
AF086708-1|AAC64104.1| 376|Homo sapiens 26S proteasome subunit ... 36 0.13
BT007307-1|AAP35971.1| 376|Homo sapiens proteasome (prosome, ma... 36 0.17
BC001747-1|AAH01747.1| 376|Homo sapiens proteasome (prosome, ma... 36 0.17
BC001100-1|AAH01100.1| 376|Homo sapiens proteasome (prosome, ma... 36 0.17
AK222895-1|BAD96615.1| 376|Homo sapiens proteasome 26S non-ATPa... 36 0.17
AF107837-1|AAD43442.1| 376|Homo sapiens 26S proteasome subunit ... 36 0.17
AB009398-1|BAA33214.1| 376|Homo sapiens 26S proteasome subunit ... 36 0.17
CR542063-1|CAG46860.1| 443|Homo sapiens TRIP15 protein. 33 0.68
BC012629-1|AAH12629.1| 443|Homo sapiens COP9 constitutive photo... 33 0.68
AK222590-1|BAD96310.1| 443|Homo sapiens COP9 constitutive photo... 33 0.68
AF212227-1|AAK26250.1| 450|Homo sapiens TRIP15-ISO protein. 33 0.68
AF100762-1|AAD43026.1| 443|Homo sapiens thyroid receptor intera... 33 0.68
AF084260-1|AAC34122.1| 443|Homo sapiens signalosome subunit 2 p... 33 0.68
AB209799-1|BAD93036.1| 451|Homo sapiens COP9 constitutive photo... 33 0.68
BC021565-1|AAH21565.1| 465|Homo sapiens sorting nexin 8 protein. 33 1.2
BC007785-1|AAH07785.2| 459|Homo sapiens SNX8 protein protein. 33 1.2
AF121858-1|AAD27831.1| 465|Homo sapiens sorting nexin 8 protein. 33 1.2
BC117329-1|AAI17330.1| 510|Homo sapiens olfactomedin 4 protein. 31 3.6
BC047740-1|AAH47740.1| 419|Homo sapiens OLFM4 protein protein. 31 3.6
AY358567-1|AAQ88930.1| 510|Homo sapiens GW112 protein. 31 3.6
AL390736-1|CAH71311.2| 510|Homo sapiens olfactomedin 4 protein. 31 3.6
AL049712-6|CAI22420.2| 906|Homo sapiens transmembrane channel-l... 31 4.8
AF417580-1|AAL86401.2| 906|Homo sapiens transmembrane channel-l... 31 4.8
X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein. 30 6.3
U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein. 30 6.3
U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protei... 30 6.3
D86970-1|BAA13206.2| 2067|Homo sapiens KIAA0216 protein. 30 6.3
AY703984-1|AAV80770.1| 1581|Homo sapiens SP-A receptor subunit S... 30 6.3
AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F, 3... 30 6.3
AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F, 3... 30 6.3
AB177860-1|BAD66838.1| 1715|Homo sapiens KIAA0216 splice variant... 30 6.3
AB177858-1|BAD66836.1| 2046|Homo sapiens KIAA0216 splice variant... 30 6.3
>AK022674-1|BAB14170.1| 264|Homo sapiens protein ( Homo sapiens
cDNA FLJ12612 fis, clone NT2RM4001582, highly similar to
Mus musculus COP9 complex subunit 7b (COPS7b) mRNA. ).
Length = 264
Score = 194 bits (472), Expect = 3e-49
Identities = 99/200 (49%), Positives = 132/200 (66%), Gaps = 8/200 (4%)
Frame = -2
Query: 649 GPYATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLL 470
G A +L+ LNLFAYGTY DYI NK EL+T Q KL+HLTI +LA++ KCIPYSVLL
Sbjct: 58 GANAAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLL 117
Query: 469 EELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADW 290
++L+++N+R+LEDLIIEA+Y DII GKLDQ + +EVD +GRD R +D +I L +W
Sbjct: 118 KDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEW 177
Query: 289 CNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQA-----ENDESASG 125
C+ CEAVL ++Q + RAN K+ R QQ +E ++ IKKTLK A E ++ +
Sbjct: 178 CDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTLKATASSSAQEMEQQLAE 237
Query: 124 ANAEPHS---APKKNSSKSK 74
PH+ P K SK K
Sbjct: 238 RECPPHAEQRQPTKKMSKVK 257
>AC073476-4|AAY24152.1| 264|Homo sapiens unknown protein.
Length = 264
Score = 194 bits (472), Expect = 3e-49
Identities = 99/200 (49%), Positives = 132/200 (66%), Gaps = 8/200 (4%)
Frame = -2
Query: 649 GPYATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLL 470
G A +L+ LNLFAYGTY DYI NK EL+T Q KL+HLTI +LA++ KCIPYSVLL
Sbjct: 58 GANAAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLL 117
Query: 469 EELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADW 290
++L+++N+R+LEDLIIEA+Y DII GKLDQ + +EVD +GRD R +D +I L +W
Sbjct: 118 KDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEW 177
Query: 289 CNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQA-----ENDESASG 125
C+ CEAVL ++Q + RAN K+ R QQ +E ++ IKKTLK A E ++ +
Sbjct: 178 CDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTLKATASSSAQEMEQQLAE 237
Query: 124 ANAEPHS---APKKNSSKSK 74
PH+ P K SK K
Sbjct: 238 RECPPHAEQRQPTKKMSKVK 257
>AK222879-1|BAD96599.1| 264|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 7B variant protein.
Length = 264
Score = 188 bits (457), Expect = 2e-47
Identities = 96/200 (48%), Positives = 131/200 (65%), Gaps = 8/200 (4%)
Frame = -2
Query: 649 GPYATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLL 470
G A +L+ LNLFAYGTY DYI NK EL+T Q KL+HLTI +LA++ KCIPYSVLL
Sbjct: 58 GANAAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLL 117
Query: 469 EELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADW 290
++L+++N+R+LEDLIIEA+Y DII GKLDQ + +EVD +GRD R +D +I L +W
Sbjct: 118 KDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEW 177
Query: 289 CNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLK-----TQAENDESASG 125
C+ C AVL +++ + RAN K+ R QQ +E ++ IKKTLK + E ++ +
Sbjct: 178 CDGCGAVLLGIERQVLRANQYKENHNRTQQQVEAEVTNIKKTLKATGSSSAQEMEQQLAE 237
Query: 124 ANAEPHS---APKKNSSKSK 74
PH+ P K SK K
Sbjct: 238 RECPPHAEQRQPTKKMSKVK 257
>BC011789-1|AAH11789.1| 275|Homo sapiens COPS7A protein protein.
Length = 275
Score = 185 bits (451), Expect = 1e-46
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 13/215 (6%)
Frame = -2
Query: 643 YATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEE 464
+A+ + L +FAYGTY DY+ + LT Q KL+HL++ TLA + KCIPY+VLLE
Sbjct: 60 FASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEA 119
Query: 463 LDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCN 284
L ++NVR LEDL+IEA+YAD++ G LDQ +R+EVD ++GRD + +D ++IA L +WC
Sbjct: 120 LALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCV 179
Query: 283 ACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPH- 107
CE VL+ +++ + RAN K++ + +Q IE ++ +KKT+K +A+ + E H
Sbjct: 180 GCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHL 239
Query: 106 ------------SAPKKNSSKSKTARNSAKFWQKS 38
P K +SK K R SAK W KS
Sbjct: 240 TELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKS 274
>AK022488-1|BAB14052.1| 275|Homo sapiens protein ( Homo sapiens
cDNA FLJ12426 fis, clone MAMMA1003113, highly similar to
Mus musculus COP9 complex subunit 7a (COPS7a) mRNA. ).
Length = 275
Score = 185 bits (451), Expect = 1e-46
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 13/215 (6%)
Frame = -2
Query: 643 YATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEE 464
+A+ + L +FAYGTY DY+ + LT Q KL+HL++ TLA + KCIPY+VLLE
Sbjct: 60 FASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEA 119
Query: 463 LDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCN 284
L ++NVR LEDL+IEA+YAD++ G LDQ +R+EVD ++GRD + +D ++IA L +WC
Sbjct: 120 LALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCV 179
Query: 283 ACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPH- 107
CE VL+ +++ + RAN K++ + +Q IE ++ +KKT+K +A+ + E H
Sbjct: 180 GCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHL 239
Query: 106 ------------SAPKKNSSKSKTARNSAKFWQKS 38
P K +SK K R SAK W KS
Sbjct: 240 TELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKS 274
>AF210052-1|AAF19205.1| 275|Homo sapiens COP9 complex subunit 7a
protein.
Length = 275
Score = 185 bits (451), Expect = 1e-46
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 13/215 (6%)
Frame = -2
Query: 643 YATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEE 464
+A+ + L +FAYGTY DY+ + LT Q KL+HL++ TLA + KCIPY+VLLE
Sbjct: 60 FASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEA 119
Query: 463 LDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCN 284
L ++NVR LEDL+IEA+YAD++ G LDQ +R+EVD ++GRD + +D ++IA L +WC
Sbjct: 120 LALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCV 179
Query: 283 ACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPH- 107
CE VL+ +++ + RAN K++ + +Q IE ++ +KKT+K +A+ + E H
Sbjct: 180 GCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHL 239
Query: 106 ------------SAPKKNSSKSKTARNSAKFWQKS 38
P K +SK K R SAK W KS
Sbjct: 240 TELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKS 274
>AF193844-1|AAF04307.1| 275|Homo sapiens COP9 complex subunit 7a
protein.
Length = 275
Score = 185 bits (451), Expect = 1e-46
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 13/215 (6%)
Frame = -2
Query: 643 YATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEE 464
+A+ + L +FAYGTY DY+ + LT Q KL+HL++ TLA + KCIPY+VLLE
Sbjct: 60 FASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEA 119
Query: 463 LDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCN 284
L ++NVR LEDL+IEA+YAD++ G LDQ +R+EVD ++GRD + +D ++IA L +WC
Sbjct: 120 LALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCV 179
Query: 283 ACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHS 104
CE VL+ +++ + RAN K++ + +Q IE ++ +KKT+K +A+ + E H
Sbjct: 180 GCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHL 239
Query: 103 A-------------PKKNSSKSKTARNSAKFWQKS 38
P K +SK K R SAK W KS
Sbjct: 240 TELREPAPGTNQRHPSKKASKGKGLRGSAKIWSKS 274
>AB033603-1|BAA85390.1| 275|Homo sapiens cop9 complex subunit 7a
protein.
Length = 275
Score = 185 bits (451), Expect = 1e-46
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 13/215 (6%)
Frame = -2
Query: 643 YATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEE 464
+A+ + L +FAYGTY DY+ + LT Q KL+HL++ TLA + KCIPY+VLLE
Sbjct: 60 FASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEA 119
Query: 463 LDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCN 284
L ++NVR LEDL+IEA+YAD++ G LDQ +R+EVD ++GRD + +D ++IA L +WC
Sbjct: 120 LALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCV 179
Query: 283 ACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPH- 107
CE VL+ +++ + RAN K++ + +Q IE ++ +KKT+K +A+ + E H
Sbjct: 180 GCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHL 239
Query: 106 ------------SAPKKNSSKSKTARNSAKFWQKS 38
P K +SK K R SAK W KS
Sbjct: 240 TELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKS 274
>AB014764-1|BAB87805.1| 275|Homo sapiens DERP10 (dermal papilla
derived protein 10) protein.
Length = 275
Score = 185 bits (451), Expect = 1e-46
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 13/215 (6%)
Frame = -2
Query: 643 YATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEE 464
+A+ + L +FAYGTY DY+ + LT Q KL+HL++ TLA + KCIPY+VLLE
Sbjct: 60 FASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEA 119
Query: 463 LDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCN 284
L ++NVR LEDL+IEA+YAD++ G LDQ +R+EVD ++GRD + +D ++IA L +WC
Sbjct: 120 LALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCV 179
Query: 283 ACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPH- 107
CE VL+ +++ + RAN K++ + +Q IE ++ +KKT+K +A+ + E H
Sbjct: 180 GCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHL 239
Query: 106 ------------SAPKKNSSKSKTARNSAKFWQKS 38
P K +SK K R SAK W KS
Sbjct: 240 TELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKS 274
>AK001318-1|BAA91620.1| 275|Homo sapiens protein ( Homo sapiens
cDNA FLJ10456 fis, clone NT2RP1001395. ).
Length = 275
Score = 184 bits (447), Expect = 3e-46
Identities = 89/215 (41%), Positives = 133/215 (61%), Gaps = 13/215 (6%)
Frame = -2
Query: 643 YATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEE 464
+A+ + L +FAYGTY DY+ + LT Q KL+HL++ TLA + KCIPY+VLLE
Sbjct: 60 FASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEA 119
Query: 463 LDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCN 284
L ++NVR LEDL+IEA+YAD++ G LDQ +R+EVD ++GRD + +D ++IA L +WC
Sbjct: 120 LALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCV 179
Query: 283 ACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPH- 107
CE VL+ +++ + RAN K++ + +Q IE ++ +K+T+K +A+ + E H
Sbjct: 180 GCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKETIKVTTAAAAAATSQDPEQHL 239
Query: 106 ------------SAPKKNSSKSKTARNSAKFWQKS 38
P K +SK K R SAK W KS
Sbjct: 240 TELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKS 274
>BC091493-1|AAH91493.1| 273|Homo sapiens COPS7B protein protein.
Length = 273
Score = 179 bits (435), Expect = 9e-45
Identities = 84/153 (54%), Positives = 111/153 (72%)
Frame = -2
Query: 649 GPYATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLL 470
G A +L+ LNLFAYGTY DYI NK EL+T Q KL+HLTI +LA++ KCIPYSVLL
Sbjct: 58 GANAAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLL 117
Query: 469 EELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADW 290
++L+++N+R+LEDLIIEA+Y DII GKLDQ + +EVD +GRD R +D +I L +W
Sbjct: 118 KDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEW 177
Query: 289 CNACEAVLNSVDQHIQRANHQKQKAIRHQQGIE 191
C+ CEAVL ++Q + RAN K+ R QQ +E
Sbjct: 178 CDGCEAVLLGIEQQVLRANQYKENHNRTQQQVE 210
>BC093015-1|AAH93015.1| 248|Homo sapiens COPS7A protein protein.
Length = 248
Score = 173 bits (420), Expect = 6e-43
Identities = 78/182 (42%), Positives = 120/182 (65%)
Frame = -2
Query: 643 YATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEE 464
+A+ + L +FAYGTY DY+ + LT Q KL+HL++ TLA + KCIPY+VLLE
Sbjct: 60 FASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEA 119
Query: 463 LDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCN 284
L ++NVR LEDL+IEA+YAD++ G LDQ +R+EVD ++GRD + +D ++IA L +WC
Sbjct: 120 LALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCV 179
Query: 283 ACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHS 104
CE VL+ +++ + RAN K++ + +Q IE ++ +KKT+K +A+ + E
Sbjct: 180 GCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPELSI 239
Query: 103 AP 98
P
Sbjct: 240 CP 241
>BC010739-1|AAH10739.2| 166|Homo sapiens COPS7B protein protein.
Length = 166
Score = 146 bits (353), Expect = 8e-35
Identities = 75/159 (47%), Positives = 104/159 (65%), Gaps = 8/159 (5%)
Frame = -2
Query: 526 LTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVAL 347
LTI +LA++ KCIPYSVLL++L+++N+R+LEDLIIEA+Y DII GKLDQ + +EVD +
Sbjct: 1 LTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCI 60
Query: 346 GRDARLEDAASIADVLADWCNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKK 167
GRD R +D +I L +WC+ CEAVL ++Q + RAN K+ R QQ +E ++ IKK
Sbjct: 61 GRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEVTNIKK 120
Query: 166 TLKTQA-----ENDESASGANAEPHS---APKKNSSKSK 74
TLK A E ++ + PH+ P K SK K
Sbjct: 121 TLKATASSSAQEMEQQLAERECPPHAEQRQPTKKMSKVK 159
>AK024273-1|BAB14868.1| 157|Homo sapiens protein ( Homo sapiens
cDNA FLJ14211 fis, clone NT2RP3003411, highly similar to
Mus musculus COP9 complex subunit 7b (COPS7b) mRNA. ).
Length = 157
Score = 137 bits (331), Expect = 4e-32
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 8/149 (5%)
Frame = -2
Query: 496 KCIPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAA 317
KCIPYSVLL++L+++N+R+LEDLIIEA+Y DII GKLDQ + +EVD +GRD R +D
Sbjct: 2 KCIPYSVLLKDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDIN 61
Query: 316 SIADVLADWCNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQA---- 149
+I L +WC+ CEAVL ++Q + RAN K+ R QQ +E ++ IKKTLK A
Sbjct: 62 NIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTLKATASSSA 121
Query: 148 -ENDESASGANAEPHS---APKKNSSKSK 74
E ++ + PH+ P K SK K
Sbjct: 122 QEMEQQLAERECPPHAEQRQPTKKMSKVK 150
>AK126326-1|BAC86526.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ44352 fis, clone TRACH3006412, highly similar
to Homo sapiens COP9 constitutive photomorphogenic
homolog subunit 7B. ).
Length = 171
Score = 124 bits (298), Expect = 4e-28
Identities = 56/105 (53%), Positives = 77/105 (73%)
Frame = -2
Query: 496 KCIPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAA 317
KCIPYSVLL++L+++N+R+LEDLIIEA+Y DII GKLDQ + +EVD +GRD R +D
Sbjct: 2 KCIPYSVLLKDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDIN 61
Query: 316 SIADVLADWCNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKI 182
+I L +WC+ CEAVL ++Q + RAN K+ R QQ +E +I
Sbjct: 62 NIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEI 106
>CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein.
Length = 374
Score = 44.4 bits (100), Expect = 4e-04
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = -2
Query: 601 TYKDYIENKSDYLE----LTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLE 434
+Y + +N D+++ L K++ LT +A + K I + + +EL I D+E
Sbjct: 251 SYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI-GADDVE 309
Query: 433 DLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSV 257
+I+A+ +++ K+DQ ++V V + R + + D L W V NS+
Sbjct: 310 AFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation
initiation factor 3, subunit M protein.
Length = 374
Score = 44.4 bits (100), Expect = 4e-04
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = -2
Query: 601 TYKDYIENKSDYLE----LTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLE 434
+Y + +N D+++ L K++ LT +A + K I + + +EL I D+E
Sbjct: 251 SYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI-GADDVE 309
Query: 433 DLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSV 257
+I+A+ +++ K+DQ ++V V + R + + D L W V NS+
Sbjct: 310 AFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1
(herpesvirus entry mediator) protein.
Length = 374
Score = 44.4 bits (100), Expect = 4e-04
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = -2
Query: 601 TYKDYIENKSDYLE----LTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLE 434
+Y + +N D+++ L K++ LT +A + K I + + +EL I D+E
Sbjct: 251 SYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI-GADDVE 309
Query: 433 DLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSV 257
+I+A+ +++ K+DQ ++V V + R + + D L W V NS+
Sbjct: 310 AFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5
protein.
Length = 374
Score = 44.4 bits (100), Expect = 4e-04
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = -2
Query: 601 TYKDYIENKSDYLE----LTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLE 434
+Y + +N D+++ L K++ LT +A + K I + + +EL I D+E
Sbjct: 251 SYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI-GADDVE 309
Query: 433 DLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSV 257
+I+A+ +++ K+DQ ++V V + R + + D L W V NS+
Sbjct: 310 AFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>AF277183-1|AAK07542.1| 206|Homo sapiens PNAS-125 protein.
Length = 206
Score = 44.4 bits (100), Expect = 4e-04
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = -2
Query: 601 TYKDYIENKSDYLE----LTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLE 434
+Y + +N D+++ L K++ LT +A + K I + + +EL I D+E
Sbjct: 67 SYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQI-GADDVE 125
Query: 433 DLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSV 257
+I+A+ +++ K+DQ ++V V + R + + D L W V NS+
Sbjct: 126 AFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 184
>AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein
variant protein.
Length = 374
Score = 44.0 bits (99), Expect = 5e-04
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = -2
Query: 601 TYKDYIENKSDYLE----LTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLE 434
+Y + +N D+++ L K++ LT +A + K I + + +EL I D+E
Sbjct: 251 SYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTVQQELQI-GADDVE 309
Query: 433 DLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSV 257
+I+A+ +++ K+DQ ++V V + R + + D L W V NS+
Sbjct: 310 AFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSL 368
>AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein.
Length = 374
Score = 43.2 bits (97), Expect = 8e-04
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = -2
Query: 601 TYKDYIENKSDYLE----LTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLE 434
+Y + +N D+++ L K++ LT +A + K I + + +EL I D+E
Sbjct: 251 SYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAIENKEISFDTMQQELQI-GADDVE 309
Query: 433 DLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSV 257
+I+A+ +++ K+DQ ++V V + R + + D L W V NS+
Sbjct: 310 AFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQRWQQLYDTLNAWKQNLNKVKNSL 368
>AF086708-1|AAC64104.1| 376|Homo sapiens 26S proteasome subunit 11
protein.
Length = 376
Score = 35.9 bits (79), Expect = 0.13
Identities = 27/114 (23%), Positives = 52/114 (45%)
Frame = -2
Query: 628 KTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKN 449
+TL + A+G D N++ L + C L +T A + + + + + I
Sbjct: 249 QTLKI-AWGQQPDLAANEAQLLRKIQLLC--LMEMTFTRPANHRQ-LTFEEIAKSAKI-T 303
Query: 448 VRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWC 287
V ++E L+++A+ ++ G +D+ KRV + R L+ + D L WC
Sbjct: 304 VNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWC 357
>BT007307-1|AAP35971.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/108 (23%), Positives = 48/108 (44%)
Frame = -2
Query: 610 AYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLED 431
A+G D N++ L + C L +T A + + + + + I V ++E
Sbjct: 254 AWGQQPDLAANEAQLLRKIQLLC--LMEMTFTRPANHRQ-LTFEEIAKSAKI-TVNEVEL 309
Query: 430 LIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWC 287
L+++A+ ++ G +D+ KRV + R L+ + D L WC
Sbjct: 310 LVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWC 357
>BC001747-1|AAH01747.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/108 (23%), Positives = 48/108 (44%)
Frame = -2
Query: 610 AYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLED 431
A+G D N++ L + C L +T A + + + + + I V ++E
Sbjct: 254 AWGQQPDLAANEAQLLRKIQLLC--LMEMTFTRPANHRQ-LTFEEIAKSAKI-TVNEVEL 309
Query: 430 LIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWC 287
L+++A+ ++ G +D+ KRV + R L+ + D L WC
Sbjct: 310 LVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWC 357
>BC001100-1|AAH01100.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/108 (23%), Positives = 48/108 (44%)
Frame = -2
Query: 610 AYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLED 431
A+G D N++ L + C L +T A + + + + + I V ++E
Sbjct: 254 AWGQQPDLAANEAQLLRKIQLLC--LMEMTFTRPANHRQ-LTFEEIAKSAKI-TVNEVEL 309
Query: 430 LIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWC 287
L+++A+ ++ G +D+ KRV + R L+ + D L WC
Sbjct: 310 LVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWC 357
>AK222895-1|BAD96615.1| 376|Homo sapiens proteasome 26S non-ATPase
subunit 13 isoform 1 variant protein.
Length = 376
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/108 (23%), Positives = 48/108 (44%)
Frame = -2
Query: 610 AYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLED 431
A+G D N++ L + C L +T A + + + + + I V ++E
Sbjct: 254 AWGQQPDLAANEAQLLRKIQLLC--LMEMTFTRPANHRQ-LTFEEIAKSAKI-TVNEVEL 309
Query: 430 LIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWC 287
L+++A+ ++ G +D+ KRV + R L+ + D L WC
Sbjct: 310 LVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWC 357
>AF107837-1|AAD43442.1| 376|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 376
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/108 (23%), Positives = 48/108 (44%)
Frame = -2
Query: 610 AYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLED 431
A+G D N++ L + C L +T A + + + + + I V ++E
Sbjct: 254 AWGQQPDLAANEAQLLRKIQLLC--LMEMTFTRPANHRQ-LTFEEIAKSAKI-TVNEVEL 309
Query: 430 LIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWC 287
L+++A+ ++ G +D+ KRV + R L+ + D L WC
Sbjct: 310 LVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWC 357
>AB009398-1|BAA33214.1| 376|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 376
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/108 (23%), Positives = 48/108 (44%)
Frame = -2
Query: 610 AYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLED 431
A+G D N++ L + C L +T A + + + + + I V ++E
Sbjct: 254 AWGQQPDLAANEAQLLRKIQLLC--LMEMTFTRPANHRQ-LTFEEIAKSAKI-TVNEVEL 309
Query: 430 LIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWC 287
L+++A+ ++ G +D+ KRV + R L+ + D L WC
Sbjct: 310 LVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWC 357
>CR542063-1|CAG46860.1| 443|Homo sapiens TRIP15 protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.68
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = -2
Query: 490 IPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVD 356
IP+ + +EL+I +V D+E L+++ I + IHG++DQ + +E+D
Sbjct: 371 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 412
>BC012629-1|AAH12629.1| 443|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 2 (Arabidopsis)
protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.68
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = -2
Query: 490 IPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVD 356
IP+ + +EL+I +V D+E L+++ I + IHG++DQ + +E+D
Sbjct: 371 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 412
>AK222590-1|BAD96310.1| 443|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 2 variant protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.68
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = -2
Query: 490 IPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVD 356
IP+ + +EL+I +V D+E L+++ I + IHG++DQ + +E+D
Sbjct: 371 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 412
>AF212227-1|AAK26250.1| 450|Homo sapiens TRIP15-ISO protein.
Length = 450
Score = 33.5 bits (73), Expect = 0.68
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = -2
Query: 490 IPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVD 356
IP+ + +EL+I +V D+E L+++ I + IHG++DQ + +E+D
Sbjct: 378 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 419
>AF100762-1|AAD43026.1| 443|Homo sapiens thyroid receptor
interactor trip15 protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.68
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = -2
Query: 490 IPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVD 356
IP+ + +EL+I +V D+E L+++ I + IHG++DQ + +E+D
Sbjct: 371 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 412
>AF084260-1|AAC34122.1| 443|Homo sapiens signalosome subunit 2
protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.68
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = -2
Query: 490 IPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVD 356
IP+ + +EL+I +V D+E L+++ I + IHG++DQ + +E+D
Sbjct: 371 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 412
>AB209799-1|BAD93036.1| 451|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 2 variant protein.
Length = 451
Score = 33.5 bits (73), Expect = 0.68
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = -2
Query: 490 IPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVD 356
IP+ + +EL+I +V D+E L+++ I + IHG++DQ + +E+D
Sbjct: 379 IPF--ISKELNI-DVADVESLLVQCILDNTIHGRIDQVNQLLELD 420
>BC021565-1|AAH21565.1| 465|Homo sapiens sorting nexin 8 protein.
Length = 465
Score = 32.7 bits (71), Expect = 1.2
Identities = 25/111 (22%), Positives = 47/111 (42%)
Frame = -2
Query: 394 GKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSVDQHIQRANHQKQKA 215
G L Q K + V+ AL D + + + + N +L S +R H+K
Sbjct: 282 GSLKQALKGLSVEFALLADKAAQQGKQEENDVVEKLNLFLDLLQSYKDLCER--HEKGVL 339
Query: 214 IRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSSKSKTARN 62
+HQ+ + + L ++ + A+N E S E ++N+ ++ RN
Sbjct: 340 HKHQRALHKYSLMKRQMMSATAQNREPESVEQLESRIVEQENAIQTMELRN 390
>BC007785-1|AAH07785.2| 459|Homo sapiens SNX8 protein protein.
Length = 459
Score = 32.7 bits (71), Expect = 1.2
Identities = 25/111 (22%), Positives = 47/111 (42%)
Frame = -2
Query: 394 GKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSVDQHIQRANHQKQKA 215
G L Q K + V+ AL D + + + + N +L S +R H+K
Sbjct: 276 GSLKQALKGLSVEFALLADKAAQQGKQEENDVVEKLNLFLDLLQSYKDLCER--HEKGVL 333
Query: 214 IRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSSKSKTARN 62
+HQ+ + + L ++ + A+N E S E ++N+ ++ RN
Sbjct: 334 HKHQRALHKYSLMKRQMMSATAQNREPESVEQLESRIVEQENAIQTMELRN 384
>AF121858-1|AAD27831.1| 465|Homo sapiens sorting nexin 8 protein.
Length = 465
Score = 32.7 bits (71), Expect = 1.2
Identities = 25/111 (22%), Positives = 47/111 (42%)
Frame = -2
Query: 394 GKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSVDQHIQRANHQKQKA 215
G L Q K + V+ AL D + + + + N +L S +R H+K
Sbjct: 282 GSLKQALKGLSVEFALLADKAAQQGKQEENDVVEKLNLFLDLLQSYKDLCER--HEKGVL 339
Query: 214 IRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSSKSKTARN 62
+HQ+ + + L ++ + A+N E S E ++N+ ++ RN
Sbjct: 340 HKHQRALHKYSLMKRQMMSATAQNREPESVEQLESRIVEQENAIQTMELRN 390
>BC117329-1|AAI17330.1| 510|Homo sapiens olfactomedin 4 protein.
Length = 510
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -2
Query: 571 DYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIE 419
+Y++L +V KKL +LT+ ++ I Y+ L EL V+++E L+I+
Sbjct: 122 EYVQLISVYEKKLLNLTVRIDIMEKDTISYTELDFELIKVEVKEMEKLVIQ 172
>BC047740-1|AAH47740.1| 419|Homo sapiens OLFM4 protein protein.
Length = 419
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -2
Query: 571 DYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIE 419
+Y++L +V KKL +LT+ ++ I Y+ L EL V+++E L+I+
Sbjct: 31 EYVQLISVYEKKLLNLTVRIDIMEKDTISYTELDFELIKVEVKEMEKLVIQ 81
>AY358567-1|AAQ88930.1| 510|Homo sapiens GW112 protein.
Length = 510
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -2
Query: 571 DYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIE 419
+Y++L +V KKL +LT+ ++ I Y+ L EL V+++E L+I+
Sbjct: 122 EYVQLISVYEKKLLNLTVRIDIMEKDTISYTELDFELIKVEVKEMEKLVIQ 172
>AL390736-1|CAH71311.2| 510|Homo sapiens olfactomedin 4 protein.
Length = 510
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -2
Query: 571 DYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIE 419
+Y++L +V KKL +LT+ ++ I Y+ L EL V+++E L+I+
Sbjct: 122 EYVQLISVYEKKLLNLTVRIDIMEKDTISYTELDFELIKVEVKEMEKLVIQ 172
>AL049712-6|CAI22420.2| 906|Homo sapiens transmembrane channel-like
2 protein.
Length = 906
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 268 LNSVDQHIQRANHQKQKAIRHQQGIEQKILYIK-KTLKTQAENDESASGANAEPHSAPKK 92
LNSV + + RAN Q +K I+ + +E+ +K K +E+ +S NA K+
Sbjct: 775 LNSVSKSLSRANAQLRKKIQVLREVEKSHKSVKGKATARDSEDTPKSSSKNATQLQLTKE 834
Query: 91 NSSKSKTARNSA 56
++ +++ A
Sbjct: 835 ETTPPSASQSQA 846
>AF417580-1|AAL86401.2| 906|Homo sapiens transmembrane channel-like
protein 2 protein.
Length = 906
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 268 LNSVDQHIQRANHQKQKAIRHQQGIEQKILYIK-KTLKTQAENDESASGANAEPHSAPKK 92
LNSV + + RAN Q +K I+ + +E+ +K K +E+ +S NA K+
Sbjct: 775 LNSVSKSLSRANAQLRKKIQVLREVEKSHKSVKGKATARDSEDTPKSSSKNATQLQLTKE 834
Query: 91 NSSKSKTARNSA 56
++ +++ A
Sbjct: 835 ETTPPSASQSQA 846
>X58521-1|CAA41411.1| 522|Homo sapiens nucleoporin p62 protein.
Length = 522
Score = 30.3 bits (65), Expect = 6.3
Identities = 31/126 (24%), Positives = 57/126 (45%)
Frame = -2
Query: 424 IEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSVDQHI 245
I +++ ++ KLDQ+ E+D L + LED S + L A ++
Sbjct: 372 ITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLSPLEELVKEQRA--------TIYL 423
Query: 244 QRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSSKSKTAR 65
Q A+ ++QK + + I+ ++ + + LK E+ + SGA A+ S P + K A
Sbjct: 424 QHADEERQKTYKLAENIDAQLKRMAQDLKDIIEH-LNTSGAPADT-SDPLQQICKILNAH 481
Query: 64 NSAKFW 47
+ W
Sbjct: 482 MDSLQW 487
>U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein.
Length = 3113
Score = 30.3 bits (65), Expect = 6.3
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = -2
Query: 277 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAP 98
E VLN + R Q +A +EQK+ + + L Q +N ESA + E
Sbjct: 333 EKVLNKCRDELVRTTAQYDQASTKYTALEQKLKKLTEDLSCQRQNAESAR-CSLEQKIKE 391
Query: 97 KKNSSKSKTARNSAKF 50
K+ + + +R F
Sbjct: 392 KEKEFQEELSRQQRSF 407
>U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protein
protein.
Length = 3210
Score = 30.3 bits (65), Expect = 6.3
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = -2
Query: 277 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAP 98
E VLN + R Q +A +EQK+ + + L Q +N ESA + E
Sbjct: 333 EKVLNKCRDELVRTTAQYDQASTKYTALEQKLKKLTEDLSCQRQNAESAR-CSLEQKIKE 391
Query: 97 KKNSSKSKTARNSAKF 50
K+ + + +R F
Sbjct: 392 KEKEFQEELSRQQRSF 407
>D86970-1|BAA13206.2| 2067|Homo sapiens KIAA0216 protein.
Length = 2067
Score = 30.3 bits (65), Expect = 6.3
Identities = 23/97 (23%), Positives = 49/97 (50%)
Frame = -2
Query: 472 LEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLAD 293
L +L+ K V+D E+ + E A I L+Q R+E+++ R ++ S + + +
Sbjct: 1557 LRDLEAK-VKDQEEELDEQ--AGTIQ-MLEQAKLRLEMEMERMRQTHSKEMESRDEEVEE 1612
Query: 292 WCNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKI 182
+C+ L ++ ++ KQK +R ++ +E K+
Sbjct: 1613 ARQSCQKKLKQMEVQLEEEYEDKQKVLREKRELEGKL 1649
>AY703984-1|AAV80770.1| 1581|Homo sapiens SP-A receptor subunit
SP-R210 alphaS protein.
Length = 1581
Score = 30.3 bits (65), Expect = 6.3
Identities = 23/97 (23%), Positives = 49/97 (50%)
Frame = -2
Query: 472 LEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLAD 293
L +L+ K V+D E+ + E A I L+Q R+E+++ R ++ S + + +
Sbjct: 1086 LRDLEAK-VKDQEEELDEQ--AGTIQ-MLEQAKLRLEMEMERMRQTHSKEMESRDEEVEE 1141
Query: 292 WCNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKI 182
+C+ L ++ ++ KQK +R ++ +E K+
Sbjct: 1142 ARQSCQKKLKQMEVQLEEEYEDKQKVLREKRELEGKL 1178
>AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 30.3 bits (65), Expect = 6.3
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = -2
Query: 277 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAP 98
E VLN + R Q +A +EQK+ + + L Q +N ESA + E
Sbjct: 333 EKVLNKCRDELVRTTAQYDQASTKYTALEQKLKKLTEDLSCQRQNAESAR-CSLEQKIKE 391
Query: 97 KKNSSKSKTARNSAKF 50
K+ + + +R F
Sbjct: 392 KEKEFQEELSRQQRSF 407
>AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 30.3 bits (65), Expect = 6.3
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = -2
Query: 277 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAP 98
E VLN + R Q +A +EQK+ + + L Q +N ESA + E
Sbjct: 333 EKVLNKCRDELVRTTAQYDQASTKYTALEQKLKKLTEDLSCQRQNAESAR-CSLEQKIKE 391
Query: 97 KKNSSKSKTARNSAKF 50
K+ + + +R F
Sbjct: 392 KEKEFQEELSRQQRSF 407
>AB177860-1|BAD66838.1| 1715|Homo sapiens KIAA0216 splice variant 2
protein.
Length = 1715
Score = 30.3 bits (65), Expect = 6.3
Identities = 23/97 (23%), Positives = 49/97 (50%)
Frame = -2
Query: 472 LEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLAD 293
L +L+ K V+D E+ + E A I L+Q R+E+++ R ++ S + + +
Sbjct: 1220 LRDLEAK-VKDQEEELDEQ--AGTIQ-MLEQAKLRLEMEMERMRQTHSKEMESRDEEVEE 1275
Query: 292 WCNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKI 182
+C+ L ++ ++ KQK +R ++ +E K+
Sbjct: 1276 ARQSCQKKLKQMEVQLEEEYEDKQKVLREKRELEGKL 1312
>AB177858-1|BAD66836.1| 2046|Homo sapiens KIAA0216 splice variant 1
protein.
Length = 2046
Score = 30.3 bits (65), Expect = 6.3
Identities = 23/97 (23%), Positives = 49/97 (50%)
Frame = -2
Query: 472 LEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLAD 293
L +L+ K V+D E+ + E A I L+Q R+E+++ R ++ S + + +
Sbjct: 1536 LRDLEAK-VKDQEEELDEQ--AGTIQ-MLEQAKLRLEMEMERMRQTHSKEMESRDEEVEE 1591
Query: 292 WCNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKI 182
+C+ L ++ ++ KQK +R ++ +E K+
Sbjct: 1592 ARQSCQKKLKQMEVQLEEEYEDKQKVLREKRELEGKL 1628
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,986,461
Number of Sequences: 237096
Number of extensions: 1756435
Number of successful extensions: 8853
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 8682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8846
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -