Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11c08
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 59 2e-09
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 59 2e-09
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 59 2e-09
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 59 2e-09
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 58 2e-09
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 58 2e-09
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 54 5e-08
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 54 5e-08
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 49 2e-06
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 49 2e-06
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 49 2e-06
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 49 2e-06
U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein... 44 6e-05
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 42 2e-04
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 42 2e-04
Z81571-4|CAB04614.1| 268|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81571-2|CAB04611.1| 202|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41026-4|AAA82351.2| 265|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81528-6|CAB04285.1| 633|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 28 4.0
Z81595-2|CAB04749.1| 527|Caenorhabditis elegans Hypothetical pr... 27 5.3
X51321-1|CAA35704.1| 422|Caenorhabditis elegans hypothetical pr... 27 7.0
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 58.8 bits (136), Expect = 2e-09
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Frame = -1
Query: 460 LQEALK--DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQIT 287
L E+LK D T++ ++ ST V++ +PK+KIET+ L++ L ++ + K F+NDA +
Sbjct: 235 LTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLG 294
Query: 286 RLLKGESLSVSEAIQK--XXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFF 113
+ G L VS+ K +P F A+HPF F
Sbjct: 295 NMADG--LYVSKVTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEEPKDFTADHPFFFV 352
Query: 112 LKGDGVTLFNGVFH 71
L D LF G+ H
Sbjct: 353 LSKDNHPLFVGLHH 366
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 58.8 bits (136), Expect = 2e-09
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Frame = -1
Query: 460 LQEALK--DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQIT 287
L E+LK D T++ ++ ST V++ +PK+KIET+ L++ L ++ + K F+NDA +
Sbjct: 235 LTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLG 294
Query: 286 RLLKGESLSVSEAIQK--XXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFF 113
+ G L VS+ K +P+VF+A+HPF+F
Sbjct: 295 NMADG--LYVSKVTHKALIEVDEEGTTAAAATVVSFVRKSARPSAIKPIVFQADHPFLFM 352
Query: 112 LKGDGVTLFNGV 77
L +F G+
Sbjct: 353 LTQTNHPIFLGI 364
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 58.8 bits (136), Expect = 2e-09
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Frame = -1
Query: 460 LQEALK--DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQIT 287
L E+LK D T++ ++ ST V++ +PK+KIET+ L++ L ++ + K F+NDA +
Sbjct: 235 LTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLG 294
Query: 286 RLLKGESLSVSEAIQK--XXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFF 113
+ G L VS+ K +P+VF+A+HPF+F
Sbjct: 295 NMADG--LYVSKVTHKALIEVDEEGTTAAAATVVSFVRKSARPSAIKPIVFQADHPFLFM 352
Query: 112 LKGDGVTLFNGV 77
L +F G+
Sbjct: 353 LTQTNHPIFLGI 364
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 58.8 bits (136), Expect = 2e-09
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Frame = -1
Query: 460 LQEALK--DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQIT 287
L E+LK D T++ ++ ST V++ +PK+KIET+ L++ L ++ + K F+NDA +
Sbjct: 235 LTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLG 294
Query: 286 RLLKGESLSVSEAIQK--XXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFF 113
+ G L VS+ K +P F A+HPF F
Sbjct: 295 NMADG--LYVSKVTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEEPKDFTADHPFFFV 352
Query: 112 LKGDGVTLFNGVFH 71
L D LF G+ H
Sbjct: 353 LSKDNHPLFVGLHH 366
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 58.4 bits (135), Expect = 2e-09
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = -1
Query: 460 LQEALK--DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQIT 287
L E+LK D T++ ++ ST V++ +PK+KIET+ L++ L ++ + K F+NDA +
Sbjct: 235 LTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLG 294
Query: 286 RLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFFLK 107
+ G L VS+ K + + F A HPF F L
Sbjct: 295 NMADG--LYVSKVTHKALIEVDEDGTVAVAATRCSIERCRKKMKENIEFHAEHPFFFILH 352
Query: 106 GDGVTLFNGVF 74
+F GVF
Sbjct: 353 HGTSYIFLGVF 363
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 58.4 bits (135), Expect = 2e-09
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = -1
Query: 460 LQEALK--DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQIT 287
L E+LK D T++ ++ ST V++ +PK+KIET+ L++ L ++ + K F+NDA +
Sbjct: 235 LTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLG 294
Query: 286 RLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFFLK 107
+ G L VS+ K + + F A HPF F L
Sbjct: 295 NMADG--LYVSKVTHKALIEVDEDGTVAVAATRCSIERCRKKMKENIEFHAEHPFFFILH 352
Query: 106 GDGVTLFNGVF 74
+F GVF
Sbjct: 353 HGTSYIFLGVF 363
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 54.0 bits (124), Expect = 5e-08
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Frame = -1
Query: 460 LQEALK--DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQIT 287
L+EALK + K ++ T ++ LPKF IE + NLK L + + IF++ A ++
Sbjct: 232 LKEALKKLNEKRFNDLLKTKKRTFMNTQLPKFTIEKDLNLKSHLQTLGITDIFSDSADLS 291
Query: 286 RLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFFLK 107
L E+L +SE + K QP+ F A+HPF F +
Sbjct: 292 GL--AENLKISEGVHKAIIEVNEEGTTAAAVTMMKAVPMSARMEQPVNFIADHPFFFTIT 349
Query: 106 GDGVTLFNGVFH 71
+F GVF+
Sbjct: 350 FLNHPIFVGVFN 361
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 54.0 bits (124), Expect = 5e-08
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Frame = -1
Query: 460 LQEALK--DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQIT 287
L+EALK + K ++ T ++ LPKF IE + NLK L + + IF++ A ++
Sbjct: 232 LKEALKKLNEKRFNDLLKTKKRTFMNTQLPKFTIEKDLNLKSHLQTLGITDIFSDSADLS 291
Query: 286 RLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFFLK 107
L E+L +SE + K QP+ F A+HPF F +
Sbjct: 292 GL--AENLKISEGVHKAIIEVNEEGTTAAAVTMMKAVPMSARMEQPVNFIADHPFFFTIT 349
Query: 106 GDGVTLFNGVFH 71
+F GVF+
Sbjct: 350 FLNHPIFVGVFN 361
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 49.2 bits (112), Expect = 2e-06
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Frame = -1
Query: 460 LQEALK--DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQIT 287
L EAL+ D T++ + +T V++ +PK+KIET L L + + K F + A ++
Sbjct: 244 LSEALQNLDSVTIQQLMSNTSNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADLS 303
Query: 286 RLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFFLK 107
G +S + +P+ F A+HPF+F L
Sbjct: 304 NFADGIYISQAAHKALIEVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFILS 363
Query: 106 GDGVTLFNGV 77
D LF G+
Sbjct: 364 KDNHPLFIGI 373
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 49.2 bits (112), Expect = 2e-06
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Frame = -1
Query: 460 LQEALK--DPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQIT 287
L EAL+ D T++ + +T V++ +PK+KIET L L + + K F + A ++
Sbjct: 244 LSEALQNLDSVTIQQLMSNTSNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADLS 303
Query: 286 RLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFFLK 107
G +S + +P+ F A+HPF+F L
Sbjct: 304 NFADGIYISQAAHKALIEVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFILS 363
Query: 106 GDGVTLFNGV 77
D LF G+
Sbjct: 364 KDNHPLFIGI 373
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/118 (25%), Positives = 53/118 (44%)
Frame = -1
Query: 430 LETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 251
++ + S+ V + +PKFKIE E +LK+ L + + +IF A ++ + + + +S
Sbjct: 242 IQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGI--ADKVFISS 299
Query: 250 AIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFFLKGDGVTLFNGV 77
I K ++P F A+HPF+F + + TLF GV
Sbjct: 300 GIHKAIIEVDEDGTTAAAASAFKVQLEMMIMAEPTQFVADHPFLFAVLFENHTLFLGV 357
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/118 (25%), Positives = 53/118 (44%)
Frame = -1
Query: 430 LETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 251
++ + S+ V + +PKFKIE E +LK+ L + + +IF A ++ + + + +S
Sbjct: 242 IQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGI--ADKVFISS 299
Query: 250 AIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFFLKGDGVTLFNGV 77
I K ++P F A+HPF+F + + TLF GV
Sbjct: 300 GIHKAIIEVDEDGTTAAAASAFKVQLEMMIMAEPTQFVADHPFLFAVLFENHTLFLGV 357
>U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein 5
protein.
Length = 115
Score = 44.0 bits (99), Expect = 6e-05
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = -1
Query: 403 STEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXX 224
+T V++ +PK+KIET L L + + K F + A ++ G + +S+A K
Sbjct: 6 NTLVNIAMPKWKIETALGLNRGLMAVGIEKAFTDSADLSNFADG--IYISQAAHKALIEV 63
Query: 223 XXXXXXXXXXXXXXXXXXXXXXSQ-PLVFKANHPFVFFLKGDGVTLFNGV 77
++ P+ F A+HPF+F L D LF GV
Sbjct: 64 DEDGTVAAAATTISSSVGSVQRTEKPIEFTADHPFLFILSKDNHPLFIGV 113
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/113 (22%), Positives = 47/113 (41%)
Frame = -1
Query: 412 SMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXX 233
++Y + L PKFK++ + NLK L+ + ++F A ++ + G L ++ A +
Sbjct: 255 NVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGI--GPGLQLASATHQAL 312
Query: 232 XXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFFLKGDGVTLFNGVF 74
+PL + +HPF+F + D LF G +
Sbjct: 313 IEVDQVGTRAAAATEAKIFFTSASSDEPLHIRVDHPFLFAIIKDNSPLFLGTY 365
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/113 (22%), Positives = 47/113 (41%)
Frame = -1
Query: 412 SMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXX 233
++Y + L PKFK++ + NLK L+ + ++F A ++ + G L ++ A +
Sbjct: 255 NVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGI--GPGLQLASATHQAL 312
Query: 232 XXXXXXXXXXXXXXXXXXXXXXXXXSQPLVFKANHPFVFFLKGDGVTLFNGVF 74
+PL + +HPF+F + D LF G +
Sbjct: 313 IEVDQVGTRAAAATEAKIFFTSASSDEPLHIRVDHPFLFAIIKDNSPLFLGTY 365
>Z81571-4|CAB04614.1| 268|Caenorhabditis elegans Hypothetical
protein M01G12.5 protein.
Length = 268
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 151 PLVFKANHPFVFFLKGDGVTLFNGVF 74
P +F+ N PF+F + +GV + G+F
Sbjct: 240 PYIFRVNRPFIFCVVQNGVPVTMGIF 265
>Z81571-2|CAB04611.1| 202|Caenorhabditis elegans Hypothetical
protein M01G12.2 protein.
Length = 202
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 151 PLVFKANHPFVFFLKGDGVTLFNGVF 74
P +F+ N PF+F + +GV + G+F
Sbjct: 174 PYIFRVNRPFIFCVVQNGVPVTMGIF 199
>U41026-4|AAA82351.2| 265|Caenorhabditis elegans Hypothetical
protein C28G1.2 protein.
Length = 265
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 151 PLVFKANHPFVFFLKGDGVTLFNGVF 74
P F+A+HPFVF + +G ++ GVF
Sbjct: 239 PYHFRADHPFVFAVLRNGHPVYFGVF 264
>Z81528-6|CAB04285.1| 633|Caenorhabditis elegans Hypothetical
protein F35E2.7 protein.
Length = 633
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 143 YKRLTYSCTHKYYGEGVSCSSFSAFLVDFNERFLNSLT 256
YK+ TY K Y E V+ + LVD+ F N+ T
Sbjct: 557 YKQATYEMARKRYAELVTECNGRCALVDYKLEFYNNAT 594
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/72 (19%), Positives = 38/72 (52%)
Frame = -1
Query: 469 ITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQI 290
+T+ E +++P ++ + S +EVD ++ + + E++ + D + +V ++ +
Sbjct: 389 VTESPETIEEPDNVDMEESS--ESEVDTHIDETRNESDDEITDDVQASDVLQVETKKCKS 446
Query: 289 TRLLKGESLSVS 254
+RLL+ + S
Sbjct: 447 SRLLEQKKFDKS 458
>Z81595-2|CAB04749.1| 527|Caenorhabditis elegans Hypothetical
protein T22H2.2 protein.
Length = 527
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 143 YKRLTYSCTHKYYGEGVSCSSFSAFLVDFNERFLNSLT 256
YK+ TY K Y E V + LVD+ F N+ T
Sbjct: 451 YKQATYEMARKRYAELVKECNGRCALVDYKLEFYNNAT 488
>X51321-1|CAA35704.1| 422|Caenorhabditis elegans hypothetical
protein protein.
Length = 422
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -1
Query: 436 KTLETAQQSMYSTEVDLYLPKFKIETETNLK----DVLSNMNVNKIFNNDAQITRLLKGE 269
K ++TA STE DL KFK+ + LK + + M +N+ Q R+L
Sbjct: 1 KMMKTAVTKKPSTEEDLSFTKFKVVPDVGLKSSQFEFVLGMPINQCIAMIQQHPRMLTKV 60
Query: 268 SLSVSE 251
L S+
Sbjct: 61 ELKYSK 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,959,652
Number of Sequences: 27780
Number of extensions: 157062
Number of successful extensions: 445
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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