Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11c01
(603 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38047-1|BAA07237.1| 257|Homo sapiens 26S proteasome subunit p3... 218 1e-56
BC065006-1|AAH65006.2| 257|Homo sapiens proteasome (prosome, ma... 218 1e-56
BC001164-1|AAH01164.3| 257|Homo sapiens proteasome (prosome, ma... 218 1e-56
AC005789-1|AAC62833.1| 257|Homo sapiens PP31_HUMAN protein. 218 1e-56
BT019688-1|AAV38494.1| 257|Homo sapiens proteasome (prosome, ma... 213 4e-55
X65293-1|CAA46388.1| 737|Homo sapiens protein kinase C epsilon... 32 1.8
BC109034-1|AAI09035.1| 737|Homo sapiens protein kinase C, epsil... 32 1.8
BC109033-1|AAI09034.1| 737|Homo sapiens protein kinase C, epsil... 32 1.8
AC017006-1|AAX93253.1| 258|Homo sapiens unknown protein. 32 1.8
>D38047-1|BAA07237.1| 257|Homo sapiens 26S proteasome subunit p31
protein.
Length = 257
Score = 218 bits (533), Expect = 1e-56
Identities = 108/190 (56%), Positives = 133/190 (70%)
Frame = -1
Query: 582 SFREIHVSTQVLLFDYKDHLPESAFTNQXXXXXXXXXLSQNRVAEFHTELERLPVDVIRT 403
SF + FDYK+ LPESA+ +Q LSQNRVAEFHTELERLP I+T
Sbjct: 70 SFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQT 129
Query: 402 DLYIRHPLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTI 223
++YI+HP++LEQYLMEGSYNK+FLAKGN+PAESYTFF+D LL+T+R EIA CIEKAY I
Sbjct: 130 NVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKI 189
Query: 222 PCAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTI 43
EA R L ++ + + +Y KKR W LGP+N Y F S++ +PS ELA+Q I
Sbjct: 190 LFTEATRILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPSTELAKQVI 247
Query: 42 EYARHLEMIV 13
EYAR LEMIV
Sbjct: 248 EYARQLEMIV 257
Score = 36.3 bits (80), Expect = 0.083
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -2
Query: 593 KDVKAFERYMSQLKCYY 543
KD+ +FERYM+QLKCYY
Sbjct: 66 KDIPSFERYMAQLKCYY 82
>BC065006-1|AAH65006.2| 257|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 8 protein.
Length = 257
Score = 218 bits (533), Expect = 1e-56
Identities = 108/190 (56%), Positives = 133/190 (70%)
Frame = -1
Query: 582 SFREIHVSTQVLLFDYKDHLPESAFTNQXXXXXXXXXLSQNRVAEFHTELERLPVDVIRT 403
SF + FDYK+ LPESA+ +Q LSQNRVAEFHTELERLP I+T
Sbjct: 70 SFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQT 129
Query: 402 DLYIRHPLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTI 223
++YI+HP++LEQYLMEGSYNK+FLAKGN+PAESYTFF+D LL+T+R EIA CIEKAY I
Sbjct: 130 NVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKI 189
Query: 222 PCAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTI 43
EA R L ++ + + +Y KKR W LGP+N Y F S++ +PS ELA+Q I
Sbjct: 190 LFTEATRILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPSTELAKQVI 247
Query: 42 EYARHLEMIV 13
EYAR LEMIV
Sbjct: 248 EYARQLEMIV 257
Score = 36.3 bits (80), Expect = 0.083
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -2
Query: 593 KDVKAFERYMSQLKCYY 543
KD+ +FERYM+QLKCYY
Sbjct: 66 KDIPSFERYMAQLKCYY 82
>BC001164-1|AAH01164.3| 257|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 8 protein.
Length = 257
Score = 218 bits (533), Expect = 1e-56
Identities = 108/190 (56%), Positives = 133/190 (70%)
Frame = -1
Query: 582 SFREIHVSTQVLLFDYKDHLPESAFTNQXXXXXXXXXLSQNRVAEFHTELERLPVDVIRT 403
SF + FDYK+ LPESA+ +Q LSQNRVAEFHTELERLP I+T
Sbjct: 70 SFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQT 129
Query: 402 DLYIRHPLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTI 223
++YI+HP++LEQYLMEGSYNK+FLAKGN+PAESYTFF+D LL+T+R EIA CIEKAY I
Sbjct: 130 NVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKI 189
Query: 222 PCAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTI 43
EA R L ++ + + +Y KKR W LGP+N Y F S++ +PS ELA+Q I
Sbjct: 190 LFTEATRILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPSTELAKQVI 247
Query: 42 EYARHLEMIV 13
EYAR LEMIV
Sbjct: 248 EYARQLEMIV 257
Score = 36.3 bits (80), Expect = 0.083
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -2
Query: 593 KDVKAFERYMSQLKCYY 543
KD+ +FERYM+QLKCYY
Sbjct: 66 KDIPSFERYMAQLKCYY 82
>AC005789-1|AAC62833.1| 257|Homo sapiens PP31_HUMAN protein.
Length = 257
Score = 218 bits (533), Expect = 1e-56
Identities = 108/190 (56%), Positives = 133/190 (70%)
Frame = -1
Query: 582 SFREIHVSTQVLLFDYKDHLPESAFTNQXXXXXXXXXLSQNRVAEFHTELERLPVDVIRT 403
SF + FDYK+ LPESA+ +Q LSQNRVAEFHTELERLP I+T
Sbjct: 70 SFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQT 129
Query: 402 DLYIRHPLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTI 223
++YI+HP++LEQYLMEGSYNK+FLAKGN+PAESYTFF+D LL+T+R EIA CIEKAY I
Sbjct: 130 NVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKI 189
Query: 222 PCAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTI 43
EA R L ++ + + +Y KKR W LGP+N Y F S++ +PS ELA+Q I
Sbjct: 190 LFTEATRILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPSTELAKQVI 247
Query: 42 EYARHLEMIV 13
EYAR LEMIV
Sbjct: 248 EYARQLEMIV 257
Score = 36.3 bits (80), Expect = 0.083
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -2
Query: 593 KDVKAFERYMSQLKCYY 543
KD+ +FERYM+QLKCYY
Sbjct: 66 KDIPSFERYMAQLKCYY 82
>BT019688-1|AAV38494.1| 257|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 8 protein.
Length = 257
Score = 213 bits (520), Expect = 4e-55
Identities = 107/190 (56%), Positives = 132/190 (69%)
Frame = -1
Query: 582 SFREIHVSTQVLLFDYKDHLPESAFTNQXXXXXXXXXLSQNRVAEFHTELERLPVDVIRT 403
SF + FDYK+ LPESA+ +Q LSQNRVAEFHTELERLP I+T
Sbjct: 70 SFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQT 129
Query: 402 DLYIRHPLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTI 223
++YI+HP++LEQYLMEGSYNK+FLAKGN+PAESYTFF+D LL+T+R EIA CIEKAY I
Sbjct: 130 NVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKI 189
Query: 222 PCAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTI 43
EA R L ++ + + +Y KKR LGP+N Y F S++ +PS ELA+Q I
Sbjct: 190 LFTEATRILFFNTPKKMTDYAKKRGCVLGPNNYYSFASQQ--QKPEDTTIPSTELAKQVI 247
Query: 42 EYARHLEMIV 13
EYAR LEMIV
Sbjct: 248 EYARQLEMIV 257
Score = 36.3 bits (80), Expect = 0.083
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -2
Query: 593 KDVKAFERYMSQLKCYY 543
KD+ +FERYM+QLKCYY
Sbjct: 66 KDIPSFERYMAQLKCYY 82
>X65293-1|CAA46388.1| 737|Homo sapiens protein kinase C epsilon
protein.
Length = 737
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 324 PLLRIFCCSCPPLNTVLEQAGV*YKDLFL*HQLEDAQVLCETRPLGFEKAGIIDSILT 497
P R + L Q GV Y+DL L + L DA+ C+ G K GI++ + T
Sbjct: 507 PRSRFYAAEVTSALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 564
>BC109034-1|AAI09035.1| 737|Homo sapiens protein kinase C, epsilon
protein.
Length = 737
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 324 PLLRIFCCSCPPLNTVLEQAGV*YKDLFL*HQLEDAQVLCETRPLGFEKAGIIDSILT 497
P R + L Q GV Y+DL L + L DA+ C+ G K GI++ + T
Sbjct: 507 PRSRFYAAEVTSALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 564
>BC109033-1|AAI09034.1| 737|Homo sapiens protein kinase C, epsilon
protein.
Length = 737
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 324 PLLRIFCCSCPPLNTVLEQAGV*YKDLFL*HQLEDAQVLCETRPLGFEKAGIIDSILT 497
P R + L Q GV Y+DL L + L DA+ C+ G K GI++ + T
Sbjct: 507 PRSRFYAAEVTSALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 564
>AC017006-1|AAX93253.1| 258|Homo sapiens unknown protein.
Length = 258
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 324 PLLRIFCCSCPPLNTVLEQAGV*YKDLFL*HQLEDAQVLCETRPLGFEKAGIIDSILT 497
P R + L Q GV Y+DL L + L DA+ C+ G K GI++ + T
Sbjct: 28 PRSRFYAAEVTSALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 85
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,390,775
Number of Sequences: 237096
Number of extensions: 1691179
Number of successful extensions: 3482
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3477
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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