Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11b23
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050537-1|AAH50537.2| 463|Homo sapiens FLJ20160 protein protein. 47 5e-05
AK127176-1|BAC86869.1| 791|Homo sapiens protein ( Homo sapiens ... 47 5e-05
AK000167-1|BAA90987.1| 463|Homo sapiens protein ( Homo sapiens ... 47 5e-05
AC093388-1|AAY24173.1| 463|Homo sapiens unknown protein. 47 5e-05
AK131080-1|BAC85130.1| 563|Homo sapiens FLJ00279 protein protein. 35 0.26
BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine phosph... 31 4.2
BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine phosph... 31 4.2
BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein. 31 4.2
BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein. 31 4.2
AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein pr... 31 4.2
AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosph... 31 4.2
AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosph... 31 4.2
AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein. 30 5.6
BC094775-1|AAH94775.1| 113|Homo sapiens LOC201725 protein protein. 30 7.4
BC065017-1|AAH65017.1| 113|Homo sapiens hypothetical protein LO... 30 7.4
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 30 7.4
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 30 7.4
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 30 7.4
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 30 7.4
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 30 7.4
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 30 7.4
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 30 7.4
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 30 7.4
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 30 7.4
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 30 7.4
BC035372-1|AAH35372.1| 788|Homo sapiens chromosome 17 open read... 29 9.8
BC032219-1|AAH32219.2| 560|Homo sapiens C17orf28 protein protein. 29 9.8
BC030578-1|AAH30578.1| 515|Homo sapiens EIF4G3 protein protein. 29 9.8
AL672037-2|CAI16194.1| 630|Homo sapiens eukaryotic translation ... 29 9.8
AL627311-2|CAI14553.1| 1585|Homo sapiens eukaryotic translation ... 29 9.8
AL627311-1|CAI14552.1| 630|Homo sapiens eukaryotic translation ... 29 9.8
AL606477-7|CAI12534.1| 1585|Homo sapiens eukaryotic translation ... 29 9.8
AL358392-2|CAI12155.1| 1585|Homo sapiens eukaryotic translation ... 29 9.8
AL358392-1|CAI12154.1| 630|Homo sapiens eukaryotic translation ... 29 9.8
AK127745-1|BAC87111.1| 451|Homo sapiens . protein. 29 9.8
AK074401-1|BAB85070.1| 625|Homo sapiens protein ( Homo sapiens ... 29 9.8
AF012072-1|AAC02903.2| 1585|Homo sapiens eIF4GII protein. 29 9.8
AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation ... 29 9.8
>BC050537-1|AAH50537.2| 463|Homo sapiens FLJ20160 protein protein.
Length = 463
Score = 47.2 bits (107), Expect = 5e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = -1
Query: 593 IIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHV 414
+I+ G+ L L C R IS++ N W ++ +E ++QG T+A +A + Y +
Sbjct: 175 LIELIGHIRVLYIGLACNTARYIYISYLENAWTVLPME-VLQGVTHAAIWAACISYLSAA 233
Query: 413 APDGYSATVQGIVAGMDDGVG 351
P + QGI+ G+ G+G
Sbjct: 234 VPPELRTSAQGILQGLHLGLG 254
>AK127176-1|BAC86869.1| 791|Homo sapiens protein ( Homo sapiens
cDNA FLJ45241 fis, clone BRCOC2006164. ).
Length = 791
Score = 47.2 bits (107), Expect = 5e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = -1
Query: 593 IIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHV 414
+I+ G+ L L C R IS++ N W ++ +E ++QG T+A +A + Y +
Sbjct: 503 LIELIGHIRVLYIGLACNTARYIYISYLENAWTVLPME-VLQGVTHAAIWAACISYLSAA 561
Query: 413 APDGYSATVQGIVAGMDDGVG 351
P + QGI+ G+ G+G
Sbjct: 562 VPPELRTSAQGILQGLHLGLG 582
>AK000167-1|BAA90987.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ20160 fis, clone COL09072. ).
Length = 463
Score = 47.2 bits (107), Expect = 5e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = -1
Query: 593 IIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHV 414
+I+ G+ L L C R IS++ N W ++ +E ++QG T+A +A + Y +
Sbjct: 175 LIELIGHIRVLYIGLACNTARYIYISYLENAWTVLPME-VLQGVTHAAIWAACISYLSAA 233
Query: 413 APDGYSATVQGIVAGMDDGVG 351
P + QGI+ G+ G+G
Sbjct: 234 VPPELRTSAQGILQGLHLGLG 254
>AC093388-1|AAY24173.1| 463|Homo sapiens unknown protein.
Length = 463
Score = 47.2 bits (107), Expect = 5e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = -1
Query: 593 IIKRWGYGTTLTFSLFCYGIRMALISFIRNPWQLVLIEGIMQGPTYALCYATIVGYAAHV 414
+I+ G+ L L C R IS++ N W ++ +E ++QG T+A +A + Y +
Sbjct: 175 LIELIGHIRVLYIGLACNTARYIYISYLENAWTVLPME-VLQGVTHAAIWAACISYLSAA 233
Query: 413 APDGYSATVQGIVAGMDDGVG 351
P + QGI+ G+ G+G
Sbjct: 234 VPPELRTSAQGILQGLHLGLG 254
>AK131080-1|BAC85130.1| 563|Homo sapiens FLJ00279 protein protein.
Length = 563
Score = 34.7 bits (76), Expect = 0.26
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -2
Query: 433 SGTRLMWPRTVT-RRLSRA*WPAWTTAWVSPWDRC*ADNCTVRWAVDIRSECSAYWR*SR 257
SGTR WP T + RR R +WTT W W + W RS S+ WR R
Sbjct: 2 SGTRRRWPPTTSWRRPRRGCSRSWTTCW---WTWTTSARARATWRRSRRSLTSS-WR-RR 56
Query: 256 PPCTPQCSWNSIGL 215
P P ++ GL
Sbjct: 57 RPSLPSMQRSATGL 70
>BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 577
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 304 PIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*P 405
P EP PP+S P + P PSS P + + E P
Sbjct: 464 PAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAP 497
>BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 1636
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 304 PIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*P 405
P EP PP+S P + P PSS P + + E P
Sbjct: 1523 PAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAP 1556
>BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.
Length = 1320
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 304 PIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*P 405
P EP PP+S P + P PSS P + + E P
Sbjct: 1207 PAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAP 1240
>BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein.
Length = 619
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 304 PIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*P 405
P EP PP+S P + P PSS P + + E P
Sbjct: 506 PAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAP 539
>AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein
protein.
Length = 990
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 304 PIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*P 405
P EP PP+S P + P PSS P + + E P
Sbjct: 877 PAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAP 910
>AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosphatase
TD14 protein.
Length = 1636
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 304 PIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*P 405
P EP PP+S P + P PSS P + + E P
Sbjct: 1523 PAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAP 1556
>AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosphatase
HD-PTP protein.
Length = 1636
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 304 PIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*P 405
P EP PP+S P + P PSS P + + E P
Sbjct: 1523 PAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAP 1556
>AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein.
Length = 1236
Score = 30.3 bits (65), Expect = 5.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 307 IEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSG 411
+ P PP+SDP P PS P+ P V PSG
Sbjct: 1201 LPPPPLPPTSDPLETPAPSPSPSPSPQAVCW-PSG 1234
>BC094775-1|AAH94775.1| 113|Homo sapiens LOC201725 protein protein.
Length = 113
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT 417
PP P S P SSD A +P P ++ W V SG T
Sbjct: 12 PPPPPPSSPSSSDASAASSPGG-PVSLGWPVPSRSSGPT 49
>BC065017-1|AAH65017.1| 113|Homo sapiens hypothetical protein
LOC201725 protein.
Length = 113
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT 417
PP P S P SSD A +P P ++ W V SG T
Sbjct: 12 PPPPPPSSPSSSDASAASSPGG-PVSLGWPVPSRSSGPT 49
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 29.9 bits (64), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMP 372
PPI P +CP +S P A P S+ P
Sbjct: 1045 PPITPPTCPSTSTPPAGPGTSAQP 1068
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 29.9 bits (64), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMP 372
PPI P +CP +S P A P S+ P
Sbjct: 777 PPITPPTCPSTSTPPAGPGTSAQP 800
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 29.9 bits (64), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMP 372
PPI P +CP +S P A P S+ P
Sbjct: 1045 PPITPPTCPSTSTPPAGPGTSAQP 1068
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 29.9 bits (64), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMP 372
PPI P +CP +S P A P S+ P
Sbjct: 777 PPITPPTCPSTSTPPAGPGTSAQP 800
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 29.9 bits (64), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMP 372
PPI P +CP +S P A P S+ P
Sbjct: 1045 PPITPPTCPSTSTPPAGPGTSAQP 1068
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein
ARP protein.
Length = 995
Score = 29.9 bits (64), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMP 372
PPI P +CP +S P A P S+ P
Sbjct: 474 PPITPPTCPSTSTPPAGPGTSAQP 497
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 29.9 bits (64), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMP 372
PPI P +CP +S P A P S+ P
Sbjct: 491 PPITPPTCPSTSTPPAGPGTSAQP 514
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 29.9 bits (64), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMP 372
PPI P +CP +S P A P S+ P
Sbjct: 491 PPITPPTCPSTSTPPAGPGTSAQP 514
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 29.9 bits (64), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMP 372
PPI P +CP +S P A P S+ P
Sbjct: 1045 PPITPPTCPSTSTPPAGPGTSAQP 1068
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 29.9 bits (64), Expect = 7.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 301 PPIEPYSCPPSSDPRAKPTPSSMP 372
PPI P +CP +S P A P S+ P
Sbjct: 1031 PPITPPTCPSTSTPPAGPGTSAQP 1054
>BC035372-1|AAH35372.1| 788|Homo sapiens chromosome 17 open reading
frame 28 protein.
Length = 788
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 399 VTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 500
V + R D+ + KGI R L NPL Q LP
Sbjct: 326 VNYLSRIHREEDFQFILKGIARLLSNPLLQTYLP 359
>BC032219-1|AAH32219.2| 560|Homo sapiens C17orf28 protein protein.
Length = 560
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 399 VTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 500
V + R D+ + KGI R L NPL Q LP
Sbjct: 98 VNYLSRIHREEDFQFILKGIARLLSNPLLQTYLP 131
>BC030578-1|AAH30578.1| 515|Homo sapiens EIF4G3 protein protein.
Length = 515
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 280 NTRNEYRPPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT*AAYPT 435
N E + P PS+ P PTP + PA+ P T P+ AT + P+
Sbjct: 403 NPPEEMKLECIPAPITPSTVPSFPPTPPTPPASPPHTPVIVPAAATTVSSPS 454
>AL672037-2|CAI16194.1| 630|Homo sapiens eukaryotic translation
initiation factor 4 gamma,udogene 1 protein.
Length = 630
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 280 NTRNEYRPPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT*AAYPT 435
N E + P PS+ P PTP + PA+ P T P+ AT + P+
Sbjct: 518 NPPEEMKLECIPAPITPSTVPSFPPTPPTPPASPPHTPVIVPAAATTVSSPS 569
>AL627311-2|CAI14553.1| 1585|Homo sapiens eukaryotic translation
initiation factor 4 gamma,actor receptor 3 (achondroplas
protein.
Length = 1585
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 280 NTRNEYRPPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT*AAYPT 435
N E + P PS+ P PTP + PA+ P T P+ AT + P+
Sbjct: 392 NPPEEMKLECIPAPITPSTVPSFPPTPPTPPASPPHTPVIVPAAATTVSSPS 443
>AL627311-1|CAI14552.1| 630|Homo sapiens eukaryotic translation
initiation factor 4 gamma,-Asp/His) box polypeptide 11 (
protein.
Length = 630
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 280 NTRNEYRPPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT*AAYPT 435
N E + P PS+ P PTP + PA+ P T P+ AT + P+
Sbjct: 518 NPPEEMKLECIPAPITPSTVPSFPPTPPTPPASPPHTPVIVPAAATTVSSPS 569
>AL606477-7|CAI12534.1| 1585|Homo sapiens eukaryotic translation
initiation factor 4 gamma,(S. cerevisiae) protein.
Length = 1585
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 280 NTRNEYRPPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT*AAYPT 435
N E + P PS+ P PTP + PA+ P T P+ AT + P+
Sbjct: 392 NPPEEMKLECIPAPITPSTVPSFPPTPPTPPASPPHTPVIVPAAATTVSSPS 443
>AL358392-2|CAI12155.1| 1585|Homo sapiens eukaryotic translation
initiation factor 4 gamma,fluid) protein.
Length = 1585
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 280 NTRNEYRPPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT*AAYPT 435
N E + P PS+ P PTP + PA+ P T P+ AT + P+
Sbjct: 392 NPPEEMKLECIPAPITPSTVPSFPPTPPTPPASPPHTPVIVPAAATTVSSPS 443
>AL358392-1|CAI12154.1| 630|Homo sapiens eukaryotic translation
initiation factor 4 gamma,e protein.
Length = 630
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 280 NTRNEYRPPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT*AAYPT 435
N E + P PS+ P PTP + PA+ P T P+ AT + P+
Sbjct: 518 NPPEEMKLECIPAPITPSTVPSFPPTPPTPPASPPHTPVIVPAAATTVSSPS 569
>AK127745-1|BAC87111.1| 451|Homo sapiens . protein.
Length = 451
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 516 VHSESVAIGVDRGDYARPDICPLLRYYSRVRGSCGP 409
+H+ +A+G+D Y PD C L Y + + GP
Sbjct: 228 LHAPGLAVGLDPEGYGNPDFCWLSIYDTLIWSFAGP 263
>AK074401-1|BAB85070.1| 625|Homo sapiens protein ( Homo sapiens
cDNA FLJ23821 fis, clone HUV00353. ).
Length = 625
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 399 VTVRGHMSRVPDYSSVAKGICRALHNPLYQHQLP 500
V + R D+ + KGI R L NPL Q LP
Sbjct: 326 VNYLSRIHREEDFQFILKGIARLLSNPLLQTYLP 359
>AF012072-1|AAC02903.2| 1585|Homo sapiens eIF4GII protein.
Length = 1585
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 280 NTRNEYRPPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT*AAYPT 435
N E + P PS+ P PTP + PA+ P T P+ AT + P+
Sbjct: 392 NPPEEMKLECIPAPITPSTVPSFPPTPPTPPASPPHTPVIVPAAATTVSSPS 443
>AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 3 variant protein.
Length = 1780
Score = 29.5 bits (63), Expect = 9.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 280 NTRNEYRPPIEPYSCPPSSDPRAKPTPSSMPATMPWTVAE*PSGAT*AAYPT 435
N E + P PS+ P PTP + PA+ P T P+ AT + P+
Sbjct: 587 NPPEEMKLECIPAPITPSTVPSFPPTPPTPPASPPHTPVIVPAAATTVSSPS 638
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,646,982
Number of Sequences: 237096
Number of extensions: 1805911
Number of successful extensions: 9003
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 7838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8902
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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