Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt11b21
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122134-1|AAM52646.1|  966|Drosophila melanogaster GH27779p pro...    28   8.7  
AE014134-308|AAF51329.2|  966|Drosophila melanogaster CG31663-PA...    28   8.7  

>AY122134-1|AAM52646.1|  966|Drosophila melanogaster GH27779p
           protein.
          Length = 966

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 441 RLVGHYGHSMTANKSGPGVTIDTMCCHLLWLSM*AYLSI 557
           RLVG Y    TA    P   ++++ CHL+W++   Y SI
Sbjct: 614 RLVG-YSFIETAWWCFPFEAMESLSCHLMWVAAATYCSI 651


>AE014134-308|AAF51329.2|  966|Drosophila melanogaster CG31663-PA
           protein.
          Length = 966

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 441 RLVGHYGHSMTANKSGPGVTIDTMCCHLLWLSM*AYLSI 557
           RLVG Y    TA    P   ++++ CHL+W++   Y SI
Sbjct: 614 RLVG-YSFIETAWWCFPFEAMESLSCHLMWVAAATYCSI 651


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,113,787
Number of Sequences: 53049
Number of extensions: 453550
Number of successful extensions: 839
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)