Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt11b17
         (644 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49835-1|CAA89996.1|  505|Homo sapiens protein disulfide isomera...    34   0.38 
U75885-1|AAC51518.1|  505|Homo sapiens ER-60 protein protein.          34   0.38 
U42068-1|AAC50331.1|  505|Homo sapiens P58 protein.                    34   0.38 
D83485-1|BAA11928.1|  505|Homo sapiens ER-60 protease protein.         34   0.38 
D16234-1|BAA03759.1|  505|Homo sapiens phospholipase C-alpha pro...    34   0.38 
BC071878-1|AAH71878.1|  505|Homo sapiens protein disulfide isome...    34   0.38 
BC036000-1|AAH36000.4|  505|Homo sapiens protein disulfide isome...    34   0.38 
BC014433-1|AAH14433.1|  505|Homo sapiens protein disulfide isome...    34   0.38 
U02569-1|AAA93114.1|  466|Homo sapiens alpha1C adrenergic recept...    33   0.87 

>Z49835-1|CAA89996.1|  505|Homo sapiens protein disulfide isomerase
           protein.
          Length = 505

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 626 PQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 507
           P++Y GGR L DFI Y+  +AT+     + K   K+  +E
Sbjct: 464 PKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQE 503


>U75885-1|AAC51518.1|  505|Homo sapiens ER-60 protein protein.
          Length = 505

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 626 PQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 507
           P++Y GGR L DFI Y+  +AT+     + K   K+  +E
Sbjct: 464 PKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQE 503


>U42068-1|AAC50331.1|  505|Homo sapiens P58 protein.
          Length = 505

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 626 PQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 507
           P++Y GGR L DFI Y+  +AT+     + K   K+  +E
Sbjct: 464 PKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQE 503


>D83485-1|BAA11928.1|  505|Homo sapiens ER-60 protease protein.
          Length = 505

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 626 PQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 507
           P++Y GGR L DFI Y+  +AT+     + K   K+  +E
Sbjct: 464 PKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQE 503


>D16234-1|BAA03759.1|  505|Homo sapiens phospholipase C-alpha
           protein.
          Length = 505

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 626 PQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 507
           P++Y GGR L DFI Y+  +AT+     + K   K+  +E
Sbjct: 464 PKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQE 503


>BC071878-1|AAH71878.1|  505|Homo sapiens protein disulfide
           isomerase family A, member 3 protein.
          Length = 505

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 626 PQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 507
           P++Y GGR L DFI Y+  +AT+     + K   K+  +E
Sbjct: 464 PKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQE 503


>BC036000-1|AAH36000.4|  505|Homo sapiens protein disulfide
           isomerase family A, member 3 protein.
          Length = 505

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 626 PQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 507
           P++Y GGR L DFI Y+  +AT+     + K   K+  +E
Sbjct: 464 PKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQE 503


>BC014433-1|AAH14433.1|  505|Homo sapiens protein disulfide
           isomerase family A, member 3 protein.
          Length = 505

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 626 PQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 507
           P++Y GGR L DFI Y+  +AT+     + K   K+  +E
Sbjct: 464 PKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQE 503


>U02569-1|AAA93114.1|  466|Homo sapiens alpha1C adrenergic receptor
           protein.
          Length = 466

 Score = 33.1 bits (72), Expect = 0.87
 Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -2

Query: 559 ANLRAGTERVTPNKERKSCRRAVVIQNFP*KICVCICVKDECNVKNNEI*LLSLCVLYLS 380
           +++  G+ R+T +K++ SC  A V      ++C C+     C  KN+++  + +  + LS
Sbjct: 401 SSMPRGSARITVSKDQSSCTTARVRSKSFLQVCCCVGPSTPCLDKNHQVPTIKVHTISLS 460

Query: 379 K-GKQI 365
           + G+++
Sbjct: 461 ENGEEV 466


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,475,114
Number of Sequences: 237096
Number of extensions: 2042986
Number of successful extensions: 7393
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7392
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)