Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt11b17
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ062786-1|AAY56659.1|  489|Drosophila melanogaster Erp60 protein.     58   1e-08
AY060296-1|AAL25335.1|  364|Drosophila melanogaster GH13982p pro...    58   1e-08
AE013599-1356|AAM68697.1|  364|Drosophila melanogaster CG8983-PB...    58   1e-08
AE013599-1355|AAF58609.2|  489|Drosophila melanogaster CG8983-PA...    58   1e-08
X15150-1|CAA33247.1|  923|Drosophila melanogaster putative recep...    30   3.1  
AY071403-1|AAL49025.1|  923|Drosophila melanogaster RE49094p pro...    30   3.1  
AE013599-485|AAF59203.1|  923|Drosophila melanogaster CG1389-PA ...    30   3.1  
AY052131-1|AAK93555.1|  510|Drosophila melanogaster SD08104p pro...    28   9.4  
AE014134-2339|AAF53293.1|  510|Drosophila melanogaster CG9302-PA...    28   9.4  

>DQ062786-1|AAY56659.1|  489|Drosophila melanogaster Erp60 protein.
          Length = 489

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 22/41 (53%), Positives = 33/41 (80%)
 Frame = -1

Query: 641 DSSKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQ 519
           D+  KP  YNGGR ++DF+KY++++AT+ELKG+DR G  K+
Sbjct: 446 DAKNKPVSYNGGREVDDFLKYIAKEATTELKGFDRSGKPKK 486


>AY060296-1|AAL25335.1|  364|Drosophila melanogaster GH13982p
           protein.
          Length = 364

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 22/41 (53%), Positives = 33/41 (80%)
 Frame = -1

Query: 641 DSSKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQ 519
           D+  KP  YNGGR ++DF+KY++++AT+ELKG+DR G  K+
Sbjct: 321 DAKNKPVSYNGGREVDDFLKYIAKEATTELKGFDRSGKPKK 361


>AE013599-1356|AAM68697.1|  364|Drosophila melanogaster CG8983-PB,
           isoform B protein.
          Length = 364

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 22/41 (53%), Positives = 33/41 (80%)
 Frame = -1

Query: 641 DSSKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQ 519
           D+  KP  YNGGR ++DF+KY++++AT+ELKG+DR G  K+
Sbjct: 321 DAKNKPVSYNGGREVDDFLKYIAKEATTELKGFDRSGKPKK 361


>AE013599-1355|AAF58609.2|  489|Drosophila melanogaster CG8983-PA,
           isoform A protein.
          Length = 489

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 22/41 (53%), Positives = 33/41 (80%)
 Frame = -1

Query: 641 DSSKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQ 519
           D+  KP  YNGGR ++DF+KY++++AT+ELKG+DR G  K+
Sbjct: 446 DAKNKPVSYNGGREVDDFLKYIAKEATTELKGFDRSGKPKK 486


>X15150-1|CAA33247.1|  923|Drosophila melanogaster putative receptor
           tyrosine kinase protein.
          Length = 923

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 385 LSKGKQI*KAFFGYRDIVVPLA-IVMLHSLTIIFTDNRSRITLLDLQNNTDA*TQFHLSL 209
           LS+G  +    F    I+VP+  I+ML SLT     NRS +  L +       ++FHLSL
Sbjct: 392 LSEGNMVKLVLF----IIVPICCILMLCSLTFC-RRNRSEVQALQMDAKDAKASEFHLSL 446

Query: 208 LSVYG 194
           +   G
Sbjct: 447 MDSSG 451


>AY071403-1|AAL49025.1|  923|Drosophila melanogaster RE49094p
           protein.
          Length = 923

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 385 LSKGKQI*KAFFGYRDIVVPLA-IVMLHSLTIIFTDNRSRITLLDLQNNTDA*TQFHLSL 209
           LS+G  +    F    I+VP+  I+ML SLT     NRS +  L +       ++FHLSL
Sbjct: 392 LSEGNMVKLVLF----IIVPICCILMLCSLTFC-RRNRSEVQALQMDAKDAKASEFHLSL 446

Query: 208 LSVYG 194
           +   G
Sbjct: 447 MDSSG 451


>AE013599-485|AAF59203.1|  923|Drosophila melanogaster CG1389-PA
           protein.
          Length = 923

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 385 LSKGKQI*KAFFGYRDIVVPLA-IVMLHSLTIIFTDNRSRITLLDLQNNTDA*TQFHLSL 209
           LS+G  +    F    I+VP+  I+ML SLT     NRS +  L +       ++FHLSL
Sbjct: 392 LSEGNMVKLVLF----IIVPICCILMLCSLTFC-RRNRSEVQALQMDAKDAKASEFHLSL 446

Query: 208 LSVYG 194
           +   G
Sbjct: 447 MDSSG 451


>AY052131-1|AAK93555.1|  510|Drosophila melanogaster SD08104p
           protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 617 YNGGRALEDFIKYVSEQATS 558
           YNGGR  +DFI Y++   TS
Sbjct: 485 YNGGRTSKDFIAYMNNPPTS 504


>AE014134-2339|AAF53293.1|  510|Drosophila melanogaster CG9302-PA
           protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 617 YNGGRALEDFIKYVSEQATS 558
           YNGGR  +DFI Y++   TS
Sbjct: 485 YNGGRTSKDFIAYMNNPPTS 504


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,037,994
Number of Sequences: 53049
Number of extensions: 610474
Number of successful extensions: 1320
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)