Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11b16
(285 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 138 8e-34
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 114 9e-27
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 105 4e-24
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 85 1e-17
09_04_0554 + 18495073-18495175,18495794-18496032 77 2e-15
03_02_0429 + 8378819-8378921,8379098-8379282,8380054-8380120,838... 74 2e-14
09_04_0556 + 18500324-18500426,18501501-18501697,18501826-185018... 64 1e-11
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 57 3e-09
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 57 3e-09
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 56 4e-09
06_03_1149 + 28018932-28020529,28020989-28021067 54 1e-08
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 54 1e-08
05_01_0438 + 3475017-3475484 54 1e-08
04_04_1238 + 31997671-31998816 54 1e-08
02_01_0464 - 3340642-3342015,3342403-3342405 54 1e-08
01_06_0031 + 25760878-25761342 54 1e-08
01_03_0108 - 12628711-12629178 54 1e-08
01_06_0033 + 25765300-25765758 53 3e-08
08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754 53 4e-08
08_01_0566 - 5028512-5029150 44 2e-05
05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198 41 2e-04
10_08_0470 - 18151326-18151769 35 0.012
07_03_0447 + 18301421-18301520,18301900-18302060 34 0.020
08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137 32 0.082
10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 30 0.33
09_04_0463 - 17803120-17803233,17803647-17803758,17803866-178039... 29 0.76
12_01_0549 + 4396159-4397327,4397341-4398353,4398609-4398676,439... 27 1.8
10_08_0956 + 21796707-21797497,21799603-21799861,21799969-21800142 27 1.8
12_02_0137 + 14153603-14153629,14154136-14154586,14155066-141552... 27 2.3
11_04_0365 - 16818468-16818514,16818619-16821706,16822860-168229... 27 3.1
04_04_1607 + 34750114-34750193,34750472-34750622,34750730-347507... 27 3.1
03_06_0392 - 33583375-33583554,33583646-33584126,33584211-33584452 27 3.1
02_02_0240 + 8196140-8198248,8198381-8198650 27 3.1
01_06_0034 + 25769436-25769701,25769749-25769887 27 3.1
08_01_0429 + 3767486-3768022,3768247-3768523,3769132-3769364,377... 26 5.4
02_05_1055 - 33798162-33798290,33798417-33798604,33798707-337987... 25 7.1
10_08_0796 + 20643667-20643912 25 9.4
>09_06_0335 +
22391378-22391480,22391580-22391769,22392747-22392813,
22393177-22393206
Length = 129
Score = 138 bits (333), Expect = 8e-34
Identities = 61/73 (83%), Positives = 66/73 (90%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNC 104
+DGRTL+DYNIQKESTLHLVLRLRGG IEPSL+ LA KYN +KMICRKCYARLHPRA NC
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNC 110
Query: 103 RKTKCGHTNNLRP 65
RK KCGH+N LRP
Sbjct: 111 RKKKCGHSNQLRP 123
>09_04_0354 +
16919133-16919235,16920145-16920355,16920478-16920544,
16920767-16920808
Length = 140
Score = 114 bits (275), Expect = 9e-27
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 7/79 (8%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGGT-------IEPSLRILAMKYNCEKMICRKCYARL 125
+DGRTL+DYNIQKESTLHLVLRLRGG+ IEP+LR LA KYN K++CR+CYARL
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGSRGGYPKGIEPNLRELAQKYNENKLVCRRCYARL 110
Query: 124 HPRATNCRKTKCGHTNNLR 68
R+TNCRK KCGH+N +R
Sbjct: 111 PLRSTNCRKKKCGHSNEIR 129
>07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710
Length = 143
Score = 105 bits (253), Expect = 4e-24
Identities = 53/77 (68%), Positives = 59/77 (76%), Gaps = 6/77 (7%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG------TIEPSLRILAMKYNCEKMICRKCYARLH 122
+DGRTL+DYNIQKESTLHLVLRLRGG IEP+L LA +KMICRKCYARL
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGGRPGYPMIEPNLLALARSKMEKKMICRKCYARLP 110
Query: 121 PRATNCRKTKCGHTNNL 71
+ATNCRK KCGHTN +
Sbjct: 111 YKATNCRKKKCGHTNEV 127
>03_02_0281 -
7069847-7069876,7070152-7070218,7071320-7071445,
7071727-7071916,7072008-7072110
Length = 171
Score = 84.6 bits (200), Expect = 1e-17
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 143
+DGRTL+DYNIQKESTLHLVLRLRGG IEPSL+ LA KYN +KMICR
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICR 97
Score = 55.6 bits (128), Expect = 6e-09
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -3
Query: 139 CYARLHPRATNCRKTKCGHTNNLRP 65
CYARLHPRA NCRK KCGH+N LRP
Sbjct: 141 CYARLHPRAVNCRKKKCGHSNQLRP 165
>09_04_0554 + 18495073-18495175,18495794-18496032
Length = 113
Score = 77.0 bits (181), Expect = 2e-15
Identities = 40/54 (74%), Positives = 46/54 (85%), Gaps = 6/54 (11%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG-----TI-EPSLRILAMKYNCEKMICRK 140
+DGRTL+DYNIQKESTLHLVLRLRGG TI EPSL +LA+KYN +KM+CRK
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGSRGGYTIQEPSLLLLALKYNEKKMVCRK 104
>03_02_0429 +
8378819-8378921,8379098-8379282,8380054-8380120,
8380516-8380544,8380739-8380774
Length = 139
Score = 74.1 bits (174), Expect = 2e-14
Identities = 36/47 (76%), Positives = 41/47 (87%), Gaps = 2/47 (4%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG--TIEPSLRILAMKYNCEKMI 149
+DGRTL+DYNIQKESTLHLVLRLRGG IEPSLR+LA K+N KM+
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGHIWIEPSLRVLAYKHNINKMV 97
>09_04_0556 +
18500324-18500426,18501501-18501697,18501826-18501892,
18502300-18502370
Length = 145
Score = 64.5 bits (150), Expect = 1e-11
Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 6/50 (12%)
Frame = -3
Query: 280 DGRTLSDYNIQKESTLHLVLRLRGG-----TI-EPSLRILAMKYNCEKMI 149
DGRTL+DYNIQKESTLHLVLRLRGG TI EP+LR LA+KY +K +
Sbjct: 52 DGRTLADYNIQKESTLHLVLRLRGGSRGGYTIQEPTLRALALKYREKKKV 101
>09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 56.8 bits (131), Expect = 3e-09
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGGTI 200
+DGRTL+DYNIQKESTLHLVLRLRGGT+
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGTM 78
Score = 36.3 bits (80), Expect = 0.004
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -3
Query: 280 DGRTLSDYNIQKESTLHLVLRLRGG 206
D +T DYNI+ S LHLVL LRGG
Sbjct: 128 DDKTAKDYNIEGGSVLHLVLALRGG 152
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 56.8 bits (131), Expect = 3e-09
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGGTI 200
+DGRTL+DYNIQKESTLHLVLRLRGGT+
Sbjct: 79 EDGRTLADYNIQKESTLHLVLRLRGGTM 106
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -3
Query: 280 DGRTLSDYNIQKESTLHLVLRLRGGTIEPSL 188
D +T DYNI+ S LHLVL LRG T +P L
Sbjct: 156 DDKTAKDYNIEGGSVLHLVLALRGDTADPIL 186
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 56.0 bits (129), Expect = 4e-09
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
KDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 442 KDGRTLADYNIQKESTLHLVLRLRGG 467
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+ YNIQKESTLHL LRLRGG
Sbjct: 518 EDGRTLAGYNIQKESTLHLALRLRGG 543
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 355 EDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 431 EDGRTLADYNIQKESTLHLVLRLRGG 456
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 507 EDGRTLADYNIQKESTLHLVLRLRGG 532
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 91 EDGRTLADYNIQKESTLHLVLRLRGG 116
Score = 49.6 bits (113), Expect = 4e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLR 212
+DGRTL+DYNIQKESTLHLVLRLR
Sbjct: 167 EDGRTLADYNIQKESTLHLVLRLR 190
>05_01_0438 + 3475017-3475484
Length = 155
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
>04_04_1238 + 31997671-31998816
Length = 381
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 355 EDGRTLADYNIQKESTLHLVLRLRGG 380
>02_01_0464 - 3340642-3342015,3342403-3342405
Length = 458
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 52 EDGRTLADYNIQKESTLHLVLRLRGG 77
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 128 EDGRTLADYNIQKESTLHLVLRLRGG 153
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 204 EDGRTLADYNIQKESTLHLVLRLRGG 229
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 280 EDGRTLADYNIQKESTLHLVLRLRGG 305
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 356 EDGRTLADYNIQKESTLHLVLRLRGG 381
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 432 EDGRTLADYNIQKESTLHLVLRLRGG 457
>01_06_0031 + 25760878-25761342
Length = 154
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 33.9 bits (74), Expect = 0.020
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -3
Query: 280 DGRTLSDYNIQKESTLHLVLRLRGG 206
D +T DY I+ S LHLVL LRGG
Sbjct: 128 DDKTAHDYKIEAGSVLHLVLALRGG 152
>01_03_0108 - 12628711-12629178
Length = 155
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
>01_06_0033 + 25765300-25765758
Length = 152
Score = 53.2 bits (122), Expect = 3e-08
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 170
+DGRTL+DYNIQKESTLHLVLRLR G + +++L K
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRRGMNDIKVKMLTGK 88
>08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754
Length = 203
Score = 52.8 bits (121), Expect = 4e-08
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
++GRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 164 EEGRTLADYNIQKESTLHLVLRLRGG 189
>08_01_0566 - 5028512-5029150
Length = 212
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
+DGRTL++Y I+KE+ LHL LRLRGG
Sbjct: 51 EDGRTLAEYGIKKEANLHLALRLRGG 76
>05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198
Length = 106
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVL 221
+DG TL+DYNIQKESTLHLVL
Sbjct: 67 EDGCTLADYNIQKESTLHLVL 87
>10_08_0470 - 18151326-18151769
Length = 147
Score = 34.7 bits (76), Expect = 0.012
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -3
Query: 280 DGRTLSDYNIQKESTLHLVLRLRGG 206
DG TL Y IQ+ESTLHL+ R+ GG
Sbjct: 57 DGHTLIYYGIQEESTLHLLGRICGG 81
>07_03_0447 + 18301421-18301520,18301900-18302060
Length = 86
Score = 33.9 bits (74), Expect = 0.020
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = -3
Query: 280 DGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILA 176
D RTL+DY IQ E TL L +RLR P R A
Sbjct: 51 DRRTLADYGIQTEHTLRLAIRLRRRGQPPHTRAQA 85
>08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137
Length = 174
Score = 31.9 bits (69), Expect = 0.082
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -3
Query: 277 GRTLSDYNIQKESTLHLVLRLRG 209
G TL+DY+I ESTLHLV L G
Sbjct: 148 GSTLADYDIHDESTLHLVQVLLG 170
>10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364
Length = 333
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -3
Query: 280 DGRTLSDYNIQKESTLHLVLRL 215
D RTL+ Y I++ESTL+L L++
Sbjct: 229 DDRTLASYGIEEESTLYLCLQI 250
>09_04_0463 -
17803120-17803233,17803647-17803758,17803866-17803927,
17804171-17804269,17804370-17804474,17804560-17804639,
17806445-17806517,17806611-17806700,17807215-17807277,
17808104-17808155,17808504-17808604,17809139-17809238,
17809683-17809746,17810127-17810184,17810549-17810635,
17810736-17810870,17810950-17811054,17811247-17811351,
17811427-17811663,17812287-17812380,17812863-17813020,
17813289-17813363,17813448-17813512,17814206-17814260
Length = 762
Score = 28.7 bits (61), Expect = 0.76
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 157 SHSY-TSWRECEGKVQLYLL*VSKPGEVWILSGCYSLKECGH 279
+H Y TS+R + KV Y+L ++K E+ SGC + C H
Sbjct: 359 AHPYMTSFRGIDNKVY-YMLDLNKNAELLNFSGCGNTLNCNH 399
>12_01_0549 +
4396159-4397327,4397341-4398353,4398609-4398676,
4399229-4399291
Length = 770
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 226 VLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHP 119
V+ LR +EP LR + Y C C++ +HP
Sbjct: 697 VMALRFSRVEPPLRSEIVAYMCNATGGTSCWSSVHP 732
>10_08_0956 + 21796707-21797497,21799603-21799861,21799969-21800142
Length = 407
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +2
Query: 98 LATVGSTRMKTGIAFTANHFLTVILHGENAKGRFN---CTSS 214
L ++GS+ + A T HF+ V +G+ +G+FN CT S
Sbjct: 125 LWSIGSSPSASASAPTTGHFVQVYSNGDVYEGQFNRGRCTGS 166
>12_02_0137 +
14153603-14153629,14154136-14154586,14155066-14155260,
14155366-14155628,14155964-14156104,14156188-14156283,
14156672-14156749,14157134-14157194,14157324-14157511,
14158441-14158569
Length = 542
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 65 GSQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKGR 196
G ++ +SA C + T M+ G TA++ T+ + +A+GR
Sbjct: 357 GVEVHFISAACENMISGTGMRPGDIVTASNGKTIEVDNTDAEGR 400
>11_04_0365 -
16818468-16818514,16818619-16821706,16822860-16822919,
16823595-16823954
Length = 1184
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 94 LSCDSW*HEDEDG--HSIYGKSFSHSY 168
L CD W +EDE G + ++G++ S Y
Sbjct: 493 LQCDEWNNEDESGSQYFLFGRTGSRYY 519
>04_04_1607 +
34750114-34750193,34750472-34750622,34750730-34750796,
34750905-34751142,34751903-34752113
Length = 248
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/57 (21%), Positives = 26/57 (45%)
Frame = -3
Query: 274 RTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNC 104
R +S+ ++++E + + + + P NC +C KCY + R+ +C
Sbjct: 139 RHVSEIDVEREEECGICMEMNNKVVLP---------NCSHAMCMKCYRQWRSRSQSC 186
>03_06_0392 - 33583375-33583554,33583646-33584126,33584211-33584452
Length = 300
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 280 DGRTLSDYNIQKESTLHLVLRL 215
D RTL+DY ++ +S + L LRL
Sbjct: 54 DHRTLADYGVRHDSVVFLSLRL 75
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 283 KDGRTLSDYNIQKESTLHLVLRLRGG 206
KD TL+ YNI ++L LR RGG
Sbjct: 764 KDNLTLAYYNIGPGVVINLTLRERGG 789
>01_06_0034 + 25769436-25769701,25769749-25769887
Length = 134
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 280 DGRTLSDYNIQKESTLHLVLRLR 212
D + +YNI+ S LHL L LR
Sbjct: 111 DDKAAHEYNIEAGSVLHLTLNLR 133
>08_01_0429 +
3767486-3768022,3768247-3768523,3769132-3769364,
3773221-3773625,3773717-3773755
Length = 496
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 85 VRTLSCDSW*HEDEDGHSIY 144
+R C+S+ H DE+G S+Y
Sbjct: 12 LRVWCCNSYLHADENGRSVY 31
>02_05_1055 -
33798162-33798290,33798417-33798604,33798707-33798767,
33799045-33799122,33799250-33799472,33799599-33799824,
33799922-33800116,33800210-33800627,33800904-33801182
Length = 598
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 65 GSQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKGR 196
G ++ + A C + T M+ G TA++ T+ ++ +A+GR
Sbjct: 413 GVEVHFIVAACENMISGTGMRPGDIVTASNGKTIEVNNTDAEGR 456
>10_08_0796 + 20643667-20643912
Length = 81
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 280 DGRTLSDYNIQKESTLHLVLRLRGGTI 200
D T +++ S LHLVL LRGG +
Sbjct: 55 DDMTAEMCDLRHGSELHLVLALRGGLL 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,290,965
Number of Sequences: 37544
Number of extensions: 129953
Number of successful extensions: 360
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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