Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11b01
(612 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089528-1|AAL90266.1| 398|Drosophila melanogaster HL08109p pro... 114 1e-25
AE014134-1721|AAF52826.1| 398|Drosophila melanogaster CG4600-PA... 114 1e-25
AE014296-218|AAF47470.2| 392|Drosophila melanogaster CG9149-PA ... 85 5e-17
AY089548-1|AAL90286.1| 410|Drosophila melanogaster LD24105p pro... 79 5e-15
AE014298-1071|AAF46282.1| 410|Drosophila melanogaster CG10932-P... 79 5e-15
AY069124-1|AAL39269.1| 469|Drosophila melanogaster GH13256p pro... 46 3e-05
AE013599-3710|AAF47083.1| 469|Drosophila melanogaster CG4581-PA... 46 3e-05
AB010262-1|BAA32690.1| 469|Drosophila melanogaster thiolase pro... 46 3e-05
AB010261-5|BAA32688.1| 469|Drosophila melanogaster thiolase pro... 46 3e-05
AY058779-1|AAL14008.1| 407|Drosophila melanogaster SD06839p pro... 35 0.075
AE014134-2982|AAF53712.2| 407|Drosophila melanogaster CG17597-P... 35 0.075
X97685-1|CAA66277.1| 543|Drosophila melanogaster sterol carrier... 34 0.17
X95443-1|CAA64718.1| 414|Drosophila melanogaster sterol carrier... 34 0.17
AY089539-1|AAL90277.1| 544|Drosophila melanogaster LD10783p pro... 34 0.17
AE014134-2983|AAF53713.1| 544|Drosophila melanogaster CG17320-P... 34 0.17
DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 prot... 30 2.8
BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p pro... 30 2.8
AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-P... 30 2.8
AE013599-383|ABI31058.1| 698|Drosophila melanogaster CG17800-PQ... 28 8.6
AE013599-368|ABI31044.1| 2013|Drosophila melanogaster CG17800-PR... 28 8.6
>AY089528-1|AAL90266.1| 398|Drosophila melanogaster HL08109p
protein.
Length = 398
Score = 114 bits (274), Expect = 1e-25
Identities = 58/89 (65%), Positives = 65/89 (73%)
Frame = -1
Query: 552 GLKLGDIDLVEINEAFAAQTLACIKELNLDESKLNVNGGAIAMGHPVGASGARITAHLAH 373
G KL DIDL+EINEAFAAQTLAC L LD SKLNVNGGAIA+GHP+GASG+RIT HL H
Sbjct: 310 GKKLEDIDLIEINEAFAAQTLACADALKLDTSKLNVNGGAIALGHPLGASGSRITGHLVH 369
Query: 372 ELRRRGLKRXXXXXXXXXXXXIALLLETI 286
EL+R+ LK IALLLE +
Sbjct: 370 ELQRKKLKYGIGSACIGGGQGIALLLEAV 398
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -3
Query: 610 PSIMGIGPVPAINNLLSATGLK 545
P IMGIGPVPAI N+L +G K
Sbjct: 291 PEIMGIGPVPAIQNVLKVSGKK 312
>AE014134-1721|AAF52826.1| 398|Drosophila melanogaster CG4600-PA
protein.
Length = 398
Score = 114 bits (274), Expect = 1e-25
Identities = 58/89 (65%), Positives = 65/89 (73%)
Frame = -1
Query: 552 GLKLGDIDLVEINEAFAAQTLACIKELNLDESKLNVNGGAIAMGHPVGASGARITAHLAH 373
G KL DIDL+EINEAFAAQTLAC L LD SKLNVNGGAIA+GHP+GASG+RIT HL H
Sbjct: 310 GKKLEDIDLIEINEAFAAQTLACADALKLDTSKLNVNGGAIALGHPLGASGSRITGHLVH 369
Query: 372 ELRRRGLKRXXXXXXXXXXXXIALLLETI 286
EL+R+ LK IALLLE +
Sbjct: 370 ELQRKKLKYGIGSACIGGGQGIALLLEAV 398
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -3
Query: 610 PSIMGIGPVPAINNLLSATGLK 545
P IMGIGPVPAI N+L +G K
Sbjct: 291 PEIMGIGPVPAIQNVLKVSGKK 312
>AE014296-218|AAF47470.2| 392|Drosophila melanogaster CG9149-PA
protein.
Length = 392
Score = 85.4 bits (202), Expect = 5e-17
Identities = 42/87 (48%), Positives = 58/87 (66%)
Frame = -1
Query: 546 KLGDIDLVEINEAFAAQTLACIKELNLDESKLNVNGGAIAMGHPVGASGARITAHLAHEL 367
K ++DL E+NEAFAAQ+LA +++L LD K+NVNGGAIA+GHP+GASGAR+ L + L
Sbjct: 305 KREEVDLYELNEAFAAQSLAVLQDLQLDAQKVNVNGGAIALGHPIGASGARVLVTLLYAL 364
Query: 366 RRRGLKRXXXXXXXXXXXXIALLLETI 286
R G ++ IAL +E +
Sbjct: 365 ERTGGRKGIASLCIGGGMGIALAVERL 391
>AY089548-1|AAL90286.1| 410|Drosophila melanogaster LD24105p
protein.
Length = 410
Score = 79.0 bits (186), Expect = 5e-15
Identities = 32/64 (50%), Positives = 52/64 (81%)
Frame = -1
Query: 552 GLKLGDIDLVEINEAFAAQTLACIKELNLDESKLNVNGGAIAMGHPVGASGARITAHLAH 373
G++ D+ + E+NEAF+ LA IK+L++D +K+NV+GGA+++GHP+G SGAR+ AHL+H
Sbjct: 324 GVRKEDVAMWEVNEAFSLVVLANIKKLDVDPAKVNVHGGAVSIGHPIGMSGARLVAHLSH 383
Query: 372 ELRR 361
L++
Sbjct: 384 SLKK 387
>AE014298-1071|AAF46282.1| 410|Drosophila melanogaster CG10932-PA
protein.
Length = 410
Score = 79.0 bits (186), Expect = 5e-15
Identities = 32/64 (50%), Positives = 52/64 (81%)
Frame = -1
Query: 552 GLKLGDIDLVEINEAFAAQTLACIKELNLDESKLNVNGGAIAMGHPVGASGARITAHLAH 373
G++ D+ + E+NEAF+ LA IK+L++D +K+NV+GGA+++GHP+G SGAR+ AHL+H
Sbjct: 324 GVRKEDVAMWEVNEAFSLVVLANIKKLDVDPAKVNVHGGAVSIGHPIGMSGARLVAHLSH 383
Query: 372 ELRR 361
L++
Sbjct: 384 SLKK 387
>AY069124-1|AAL39269.1| 469|Drosophila melanogaster GH13256p
protein.
Length = 469
Score = 46.4 bits (105), Expect = 3e-05
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Frame = -1
Query: 552 GLKLGDIDLVEINEAFAAQTLACIKELNLDE-----------------SKLNVNGGAIAM 424
GL L DID EI+EAFA Q +A +K L+ D SK N GG++++
Sbjct: 358 GLTLKDIDSWEIHEAFAGQIVANLKALDSDWFCKTYLGLNEKVGTPDLSKWNNWGGSLSI 417
Query: 423 GHPVGASGARITAHLAHELRRRGLKRXXXXXXXXXXXXIALLLE 292
GHP A+G R+ H A+ L R K +A+L+E
Sbjct: 418 GHPFAATGVRLCMHTANRLVREDGKLGVVAACAAGGQGVAMLIE 461
>AE013599-3710|AAF47083.1| 469|Drosophila melanogaster CG4581-PA
protein.
Length = 469
Score = 46.4 bits (105), Expect = 3e-05
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Frame = -1
Query: 552 GLKLGDIDLVEINEAFAAQTLACIKELNLDE-----------------SKLNVNGGAIAM 424
GL L DID EI+EAFA Q +A +K L+ D SK N GG++++
Sbjct: 358 GLTLKDIDSWEIHEAFAGQIVANLKALDSDWFCKTYLGLNEKVGTPDLSKWNNWGGSLSI 417
Query: 423 GHPVGASGARITAHLAHELRRRGLKRXXXXXXXXXXXXIALLLE 292
GHP A+G R+ H A+ L R K +A+L+E
Sbjct: 418 GHPFAATGVRLCMHTANRLVREDGKLGVVAACAAGGQGVAMLIE 461
>AB010262-1|BAA32690.1| 469|Drosophila melanogaster thiolase
protein.
Length = 469
Score = 46.4 bits (105), Expect = 3e-05
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Frame = -1
Query: 552 GLKLGDIDLVEINEAFAAQTLACIKELNLDE-----------------SKLNVNGGAIAM 424
GL L DID EI+EAFA Q +A +K L+ D SK N GG++++
Sbjct: 358 GLTLKDIDSWEIHEAFAGQIVANLKALDSDWFCKTYLGLNEKVGTPDLSKWNNWGGSLSI 417
Query: 423 GHPVGASGARITAHLAHELRRRGLKRXXXXXXXXXXXXIALLLE 292
GHP A+G R+ H A+ L R K +A+L+E
Sbjct: 418 GHPFAATGVRLCMHTANRLVREDGKLGVVAACAAGGQGVAMLIE 461
>AB010261-5|BAA32688.1| 469|Drosophila melanogaster thiolase
protein.
Length = 469
Score = 46.4 bits (105), Expect = 3e-05
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Frame = -1
Query: 552 GLKLGDIDLVEINEAFAAQTLACIKELNLDE-----------------SKLNVNGGAIAM 424
GL L DID EI+EAFA Q +A +K L+ D SK N GG++++
Sbjct: 358 GLTLKDIDSWEIHEAFAGQIVANLKALDSDWFCKTYLGLNEKVGTPDLSKWNNWGGSLSI 417
Query: 423 GHPVGASGARITAHLAHELRRRGLKRXXXXXXXXXXXXIALLLE 292
GHP A+G R+ H A+ L R K +A+L+E
Sbjct: 418 GHPFAATGVRLCMHTANRLVREDGKLGVVAACAAGGQGVAMLIE 461
>AY058779-1|AAL14008.1| 407|Drosophila melanogaster SD06839p
protein.
Length = 407
Score = 35.1 bits (77), Expect = 0.075
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Frame = -1
Query: 552 GLKLGDIDLVEINEAFAAQTLACIKELNL-DESK-----------------LNVNGGAIA 427
G K D+ +VE+++ F+A L + L L E K +N +GG I+
Sbjct: 285 GYKPQDVQVVELHDCFSANELITYEALGLCGEGKAGEFIDAGDNTYGGKFVVNPSGGLIS 344
Query: 426 MGHPVGASGARITAHLAHELRRRGLKR 346
GHP+GA+G A L +LR KR
Sbjct: 345 KGHPLGATGLAQCAELCWQLRGLAEKR 371
>AE014134-2982|AAF53712.2| 407|Drosophila melanogaster CG17597-PA
protein.
Length = 407
Score = 35.1 bits (77), Expect = 0.075
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Frame = -1
Query: 552 GLKLGDIDLVEINEAFAAQTLACIKELNL-DESK-----------------LNVNGGAIA 427
G K D+ +VE+++ F+A L + L L E K +N +GG I+
Sbjct: 285 GYKPQDVQVVELHDCFSANELITYEALGLCGEGKAGEFIDAGDNTYGGKFVVNPSGGLIS 344
Query: 426 MGHPVGASGARITAHLAHELRRRGLKR 346
GHP+GA+G A L +LR KR
Sbjct: 345 KGHPLGATGLAQCAELCWQLRGLAEKR 371
>X97685-1|CAA66277.1| 543|Drosophila melanogaster sterol carrier
protein x protein.
Length = 543
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 453 LNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 346
+N +GG I+ GHP+GA+G A L +LR KR
Sbjct: 336 VNPSGGLISKGHPLGATGLAQCAELCWQLRGLAEKR 371
>X95443-1|CAA64718.1| 414|Drosophila melanogaster sterol carrier
protein x-relatedthiolase protein.
Length = 414
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 453 LNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 346
+N +GG I+ GHP+GA+G A L +LR KR
Sbjct: 336 VNPSGGLISKGHPLGATGLAQCAELCWQLRGLAEKR 371
>AY089539-1|AAL90277.1| 544|Drosophila melanogaster LD10783p
protein.
Length = 544
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 453 LNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 346
+N +GG I+ GHP+GA+G A L +LR KR
Sbjct: 336 VNPSGGLISKGHPLGATGLAQCAELCWQLRGLAEKR 371
>AE014134-2983|AAF53713.1| 544|Drosophila melanogaster CG17320-PA
protein.
Length = 544
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 453 LNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 346
+N +GG I+ GHP+GA+G A L +LR KR
Sbjct: 336 VNPSGGLISKGHPLGATGLAQCAELCWQLRGLAEKR 371
>DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 protein.
Length = 1309
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 296 SSKAIPCPPPMHAEPI-PLFKPRRLSS*AK*AVILAPDAPTGCPIAMAPPFT 448
SSK++ PPP +E P +P LS+ A +P G P A +P T
Sbjct: 1156 SSKSMVAPPPAKSEETEPPLEPTNLSTSAPKVASRSPSTGAGSPPASSPKAT 1207
>BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p protein.
Length = 1322
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 296 SSKAIPCPPPMHAEPI-PLFKPRRLSS*AK*AVILAPDAPTGCPIAMAPPFT 448
SSK++ PPP +E P +P LS+ A +P G P A +P T
Sbjct: 1163 SSKSMVAPPPAKSEETEPPLEPTNLSTSAPKVASRSPSTGAGSPPASSPKAT 1214
>AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-PA
protein.
Length = 1322
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 296 SSKAIPCPPPMHAEPI-PLFKPRRLSS*AK*AVILAPDAPTGCPIAMAPPFT 448
SSK++ PPP +E P +P LS+ A +P G P A +P T
Sbjct: 1163 SSKSMVAPPPAKSEETEPPLEPTNLSTSAPKVASRSPSTGAGSPPASSPKAT 1214
>AE013599-383|ABI31058.1| 698|Drosophila melanogaster CG17800-PQ,
isoform Q protein.
Length = 698
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 591 DLFPPSTIYYPPLGLKLGDIDLVEINEAFAAQTLACIKELNLD-ESKLNVNGGAIAMGHP 415
D P S L L G++ + E+ ++ C + L E++L+ G + + P
Sbjct: 182 DFLPGSEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEP 241
Query: 414 VGASGARITA 385
VG+ G R+T+
Sbjct: 242 VGSIGPRLTS 251
>AE013599-368|ABI31044.1| 2013|Drosophila melanogaster CG17800-PR,
isoform R protein.
Length = 2013
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 591 DLFPPSTIYYPPLGLKLGDIDLVEINEAFAAQTLACIKELNLD-ESKLNVNGGAIAMGHP 415
D P S L L G++ + E+ ++ C + L E++L+ G + + P
Sbjct: 182 DFLPGSEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEP 241
Query: 414 VGASGARITA 385
VG+ G R+T+
Sbjct: 242 VGSIGPRLTS 251
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,738,356
Number of Sequences: 53049
Number of extensions: 493129
Number of successful extensions: 1711
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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