Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt11a22
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 81 9e-16
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 81 9e-16
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 81 9e-16
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 81 9e-16
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 73 1e-13
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 73 1e-13
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 69 3e-12
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 69 3e-12
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 65 5e-11
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 65 5e-11
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 60 1e-09
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 60 1e-09
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 54 9e-08
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 54 9e-08
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 48 4e-06
U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein... 41 7e-04
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 33 0.13
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 33 0.13
U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated... 29 2.1
AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gat... 29 2.1
Z50177-7|CAA90542.3| 178|Caenorhabditis elegans Hypothetical pr... 29 3.7
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 29 3.7
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 29 3.7
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 29 3.7
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 29 3.7
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 29 3.7
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 29 3.7
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 29 3.7
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 29 3.7
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 29 3.7
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 29 3.7
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 29 3.7
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 29 3.7
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 29 3.7
U80843-9|AAB37969.1| 392|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 28 6.5
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 80.6 bits (190), Expect = 9e-16
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Frame = -2
Query: 540 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 361
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 360 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXX 181
T+ L++ L ++ + K F+NDA + + G L VS+ K
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEEGTKAAAATTVS 327
Query: 180 XESLSA--VISEPTVFDANHPFVFFLTGEGVNLFNG 79
SA V+ EP F A+HPF F L+ + LF G
Sbjct: 328 ISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVG 363
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 80.6 bits (190), Expect = 9e-16
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Frame = -2
Query: 540 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 361
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 360 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXX 181
T+ L++ L ++ + K F+NDA + + G L VS+ K
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEEGTTAAAATVVS 327
Query: 180 XESLSAVIS--EPTVFDANHPFVFFLTGEGVNLFNG 79
SA S +P VF A+HPF+F LT +F G
Sbjct: 328 FVRKSARPSAIKPIVFQADHPFLFMLTQTNHPIFLG 363
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 80.6 bits (190), Expect = 9e-16
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Frame = -2
Query: 540 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 361
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 360 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXX 181
T+ L++ L ++ + K F+NDA + + G L VS+ K
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEEGTTAAAATVVS 327
Query: 180 XESLSAVIS--EPTVFDANHPFVFFLTGEGVNLFNG 79
SA S +P VF A+HPF+F LT +F G
Sbjct: 328 FVRKSARPSAIKPIVFQADHPFLFMLTQTNHPIFLG 363
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 80.6 bits (190), Expect = 9e-16
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
Frame = -2
Query: 540 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 361
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 360 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXX 181
T+ L++ L ++ + K F+NDA + + G L VS+ K
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEEGTKAAAATTVS 327
Query: 180 XESLSA--VISEPTVFDANHPFVFFLTGEGVNLFNG 79
SA V+ EP F A+HPF F L+ + LF G
Sbjct: 328 ISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVG 363
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 73.3 bits (172), Expect = 1e-13
Identities = 43/144 (29%), Positives = 72/144 (50%)
Frame = -2
Query: 540 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 361
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 360 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXX 181
T+ L++ L ++ + K F+NDA + + G L VS+ K
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEDGTVAVAATRCS 327
Query: 180 XESLSAVISEPTVFDANHPFVFFL 109
E + E F A HPF F L
Sbjct: 328 IERCRKKMKENIEFHAEHPFFFIL 351
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 73.3 bits (172), Expect = 1e-13
Identities = 43/144 (29%), Positives = 72/144 (50%)
Frame = -2
Query: 540 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 361
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 360 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXX 181
T+ L++ L ++ + K F+NDA + + G L VS+ K
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEDGTVAVAATRCS 327
Query: 180 XESLSAVISEPTVFDANHPFVFFL 109
E + E F A HPF F L
Sbjct: 328 IERCRKKMKENIEFHAEHPFFFIL 351
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 68.9 bits (161), Expect = 3e-12
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 2/171 (1%)
Frame = -2
Query: 585 KRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSM 406
+ + KY E+ Q++ +PYK +L + LPK + G+++ + L D T++ +
Sbjct: 207 RNSNRKYSENGQF--QVLSLPYKDTSFALSIFLPKTRFGLSEALQNL-DSVTIQQLMSNT 263
Query: 405 YSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXX 226
+T V++ +PK+KIET L L + + K F + A ++ G + +S+A K
Sbjct: 264 SNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADLSNFADG--IYISQAAHKALIE 321
Query: 225 XXXXXXXXXXXXXXXXESLSAVI--SEPTVFDANHPFVFFLTGEGVNLFNG 79
S I EP F A+HPF+F L+ + LF G
Sbjct: 322 VDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFILSKDNHPLFIG 372
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 68.9 bits (161), Expect = 3e-12
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 2/171 (1%)
Frame = -2
Query: 585 KRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSM 406
+ + KY E+ Q++ +PYK +L + LPK + G+++ + L D T++ +
Sbjct: 207 RNSNRKYSENGQF--QVLSLPYKDTSFALSIFLPKTRFGLSEALQNL-DSVTIQQLMSNT 263
Query: 405 YSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXX 226
+T V++ +PK+KIET L L + + K F + A ++ G + +S+A K
Sbjct: 264 SNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADLSNFADG--IYISQAAHKALIE 321
Query: 225 XXXXXXXXXXXXXXXXESLSAVI--SEPTVFDANHPFVFFLTGEGVNLFNG 79
S I EP F A+HPF+F L+ + LF G
Sbjct: 322 VDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFILSKDNHPLFIG 372
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 64.9 bits (151), Expect = 5e-11
Identities = 39/154 (25%), Positives = 73/154 (47%)
Frame = -2
Query: 540 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 361
Q++ + Y + +L + LPK + G+ E + + ++ + S+ V + +PKFKIE
Sbjct: 206 QVLSLKYADPKFTLAIFLPKQRFGLVDALEKING-EYIQNLLNDLKSSYVSVQIPKFKIE 264
Query: 360 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXX 181
E +LK+ L + + +IF A ++ + + + +S I K
Sbjct: 265 KELDLKETLEAIGIKEIFAEGADLSGI--ADKVFISSGIHKAIIEVDEDGTTAAAASAFK 322
Query: 180 XESLSAVISEPTVFDANHPFVFFLTGEGVNLFNG 79
+ +++EPT F A+HPF+F + E LF G
Sbjct: 323 VQLEMMIMAEPTQFVADHPFLFAVLFENHTLFLG 356
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 64.9 bits (151), Expect = 5e-11
Identities = 39/154 (25%), Positives = 73/154 (47%)
Frame = -2
Query: 540 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 361
Q++ + Y + +L + LPK + G+ E + + ++ + S+ V + +PKFKIE
Sbjct: 206 QVLSLKYADPKFTLAIFLPKQRFGLVDALEKING-EYIQNLLNDLKSSYVSVQIPKFKIE 264
Query: 360 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXX 181
E +LK+ L + + +IF A ++ + + + +S I K
Sbjct: 265 KELDLKETLEAIGIKEIFAEGADLSGI--ADKVFISSGIHKAIIEVDEDGTTAAAASAFK 322
Query: 180 XESLSAVISEPTVFDANHPFVFFLTGEGVNLFNG 79
+ +++EPT F A+HPF+F + E LF G
Sbjct: 323 VQLEMMIMAEPTQFVADHPFLFAVLFENHTLFLG 356
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 60.5 bits (140), Expect = 1e-09
Identities = 37/144 (25%), Positives = 66/144 (45%)
Frame = -2
Query: 537 LIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIET 358
++ + Y + V LPK ++ + + + L + K ++ T ++ LPKF IE
Sbjct: 209 VLHVAYSDQRYQFSVFLPKLRNSLKEALKKLNE-KRFNDLLKTKKRTFMNTQLPKFTIEK 267
Query: 357 ETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXXX 178
+ NLK L + + IF++ A ++ L E+L +SE + K
Sbjct: 268 DLNLKSHLQTLGITDIFSDSADLSGL--AENLKISEGVHKAIIEVNEEGTTAAAVTMMKA 325
Query: 177 ESLSAVISEPTVFDANHPFVFFLT 106
+SA + +P F A+HPF F +T
Sbjct: 326 VPMSARMEQPVNFIADHPFFFTIT 349
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 60.5 bits (140), Expect = 1e-09
Identities = 37/144 (25%), Positives = 66/144 (45%)
Frame = -2
Query: 537 LIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIET 358
++ + Y + V LPK ++ + + + L + K ++ T ++ LPKF IE
Sbjct: 209 VLHVAYSDQRYQFSVFLPKLRNSLKEALKKLNE-KRFNDLLKTKKRTFMNTQLPKFTIEK 267
Query: 357 ETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXXXX 178
+ NLK L + + IF++ A ++ L E+L +SE + K
Sbjct: 268 DLNLKSHLQTLGITDIFSDSADLSGL--AENLKISEGVHKAIIEVNEEGTTAAAVTMMKA 325
Query: 177 ESLSAVISEPTVFDANHPFVFFLT 106
+SA + +P F A+HPF F +T
Sbjct: 326 VPMSARMEQPVNFIADHPFFFTIT 349
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 54.0 bits (124), Expect = 9e-08
Identities = 40/173 (23%), Positives = 72/173 (41%)
Frame = -2
Query: 597 PMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETA 418
PM+ + DY Y + Q+I IP+K + + LP + + + ++L K
Sbjct: 196 PMLRETRDYFYNKDDEW--QVIGIPFKDKSAWFAIFLPTRRFALAENLKSLNAAK-FHNL 252
Query: 417 QQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQK 238
++Y + L PKFK++ + NLK L+ + ++F A ++ + G L ++ A +
Sbjct: 253 INNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGI--GPGLQLASATHQ 310
Query: 237 XXXXXXXXXXXXXXXXXXXXESLSAVISEPTVFDANHPFVFFLTGEGVNLFNG 79
SA EP +HPF+F + + LF G
Sbjct: 311 ALIEVDQVGTRAAAATEAKIFFTSASSDEPLHIRVDHPFLFAIIKDNSPLFLG 363
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 54.0 bits (124), Expect = 9e-08
Identities = 40/173 (23%), Positives = 72/173 (41%)
Frame = -2
Query: 597 PMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETA 418
PM+ + DY Y + Q+I IP+K + + LP + + + ++L K
Sbjct: 196 PMLRETRDYFYNKDDEW--QVIGIPFKDKSAWFAIFLPTRRFALAENLKSLNAAK-FHNL 252
Query: 417 QQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQK 238
++Y + L PKFK++ + NLK L+ + ++F A ++ + G L ++ A +
Sbjct: 253 INNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGI--GPGLQLASATHQ 310
Query: 237 XXXXXXXXXXXXXXXXXXXXESLSAVISEPTVFDANHPFVFFLTGEGVNLFNG 79
SA EP +HPF+F + + LF G
Sbjct: 311 ALIEVDQVGTRAAAATEAKIFFTSASSDEPLHIRVDHPFLFAIIKDNSPLFLG 363
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/101 (25%), Positives = 53/101 (52%)
Frame = -2
Query: 540 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 361
Q++ +PY + + LPK++ G+ + + L T++ + ++ + V++ +P ++ E
Sbjct: 212 QVLSLPYTDSSFEMTIFLPKEQFGLAEALKTL-GTSTIQELKSNVSNYLVNVQIPIWRNE 270
Query: 360 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQK 238
TE +L L + + KI N A I E++ +SE I K
Sbjct: 271 TEIDLNSTLQAIGITKILNESAYIGNF--AENVHISEFIHK 309
>U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein 5
protein.
Length = 115
Score = 41.1 bits (92), Expect = 7e-04
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = -2
Query: 402 STEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXX 223
+T V++ +PK+KIET L L + + K F + A ++ G + +S+A K
Sbjct: 6 NTLVNIAMPKWKIETALGLNRGLMAVGIEKAFTDSADLSNFADG--IYISQAAHKALIEV 63
Query: 222 XXXXXXXXXXXXXXXESLSAVISE-PTVFDANHPFVFFLTGEGVNLFNG 79
S +E P F A+HPF+F L+ + LF G
Sbjct: 64 DEDGTVAAAATTISSSVGSVQRTEKPIEFTADHPFLFILSKDNHPLFIG 112
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = -2
Query: 492 VLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNK 313
V K+K+ I QL++ K+ KT+ ++++Y +E L +E+E NLK+ L M V K
Sbjct: 400 VSEKEKEAIEQLEKIQKENKTI--VKENVYLSESKQVL----LESEINLKNELDEMAV-K 452
Query: 312 IFNNDAQITRL 280
+ N+ Q+ L
Sbjct: 453 LRNSQHQVAGL 463
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = -2
Query: 492 VLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNK 313
V K+K+ I QL++ K+ KT+ ++++Y +E L +E+E NLK+ L M V K
Sbjct: 400 VSEKEKEAIEQLEKIQKENKTI--VKENVYLSESKQVL----LESEINLKNELDEMAV-K 452
Query: 312 IFNNDAQITRL 280
+ N+ Q+ L
Sbjct: 453 LRNSQHQVAGL 463
>U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated
chloride channelprotein 3 protein.
Length = 484
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +1
Query: 136 VEYSWLTYNGTQ*FYVEYVSCSSFSAFLVDFNERFL 243
+E++W+TY ++ FY +CSS ++ L++ + +
Sbjct: 323 LEFAWVTYISSRSFYKRNKNCSSRNSLLIETKQALI 358
>AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gated
chloride channelsubunit protein.
Length = 484
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +1
Query: 136 VEYSWLTYNGTQ*FYVEYVSCSSFSAFLVDFNERFL 243
+E++W+TY ++ FY +CSS ++ L++ + +
Sbjct: 323 LEFAWVTYISSRSFYKRNKNCSSRNSLLIETKQALI 358
>Z50177-7|CAA90542.3| 178|Caenorhabditis elegans Hypothetical
protein F46G10.1a protein.
Length = 178
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 492 VLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMN-VN 316
VLPKDKD + QL+ D +E + + T VD+ + E N D++ N VN
Sbjct: 111 VLPKDKDVLAQLKRE-ADFFGMEVFKYLIQETLVDI-----EKEQRANTNDIVDIRNSVN 164
Query: 315 KIFNN 301
+I NN
Sbjct: 165 QIANN 169
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -2
Query: 570 KYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEV 391
K E A ++ L + D+S +V +PK+ Q E+ L TA +S+ + +V
Sbjct: 855 KEPEVAEISLDLSVVALGVDESGKVVDIPKEVPKAVQRHESFSPTSELTTASESLSAEKV 914
Query: 390 DL 385
L
Sbjct: 915 HL 916
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -2
Query: 570 KYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEV 391
K E A ++ L + D+S +V +PK+ Q E+ L TA +S+ + +V
Sbjct: 855 KEPEVAEISLDLSVVALGVDESGKVVDIPKEVPKAVQRHESFSPTSELTTASESLSAEKV 914
Query: 390 DL 385
L
Sbjct: 915 HL 916
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -2
Query: 570 KYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEV 391
K E A ++ L + D+S +V +PK+ Q E+ L TA +S+ + +V
Sbjct: 855 KEPEVAEISLDLSVVALGVDESGKVVDIPKEVPKAVQRHESFSPTSELTTASESLSAEKV 914
Query: 390 DL 385
L
Sbjct: 915 HL 916
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -2
Query: 531 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 367
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1475 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1533
Query: 366 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 250
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1534 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1574
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -2
Query: 531 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 367
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1456 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1514
Query: 366 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 250
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1515 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1555
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -2
Query: 531 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 367
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1512 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1570
Query: 366 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 250
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1571 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1611
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -2
Query: 531 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 367
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1466 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1524
Query: 366 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 250
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1525 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1565
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -2
Query: 531 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 367
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1466 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1524
Query: 366 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 250
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1525 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1565
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -2
Query: 531 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 367
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1466 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1524
Query: 366 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 250
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1525 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1565
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -2
Query: 531 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 367
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1475 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1533
Query: 366 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 250
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1534 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1574
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -2
Query: 531 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 367
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1466 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1524
Query: 366 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 250
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1525 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1565
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -2
Query: 531 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 367
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1456 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1514
Query: 366 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 250
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1515 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1555
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -2
Query: 531 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 367
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1512 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1570
Query: 366 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 250
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1571 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1611
>U80843-9|AAB37969.1| 392|Caenorhabditis elegans Hypothetical
protein C32B5.14 protein.
Length = 392
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 173 H*VPL*VSQLYSTRTIPSYSS*REKVSIYLTEFSFLR 63
H + L SQ YSTR S+ + +K+S Y+ E +F+R
Sbjct: 125 HNLTLQKSQRYSTRIWESHGTILKKLSYYVPENNFIR 161
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/72 (19%), Positives = 38/72 (52%)
Frame = -2
Query: 468 ITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQI 289
+T+ E +++P ++ + S +EVD ++ + + E++ + D + +V ++ +
Sbjct: 389 VTESPETIEEPDNVDMEESS--ESEVDTHIDETRNESDDEITDDVQASDVLQVETKKCKS 446
Query: 288 TRLLKGESLSVS 253
+RLL+ + S
Sbjct: 447 SRLLEQKKFDKS 458
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,818,908
Number of Sequences: 27780
Number of extensions: 210694
Number of successful extensions: 599
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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